Data search
Results for MligTC455_41434
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41434 | 736 | 15.32 | Mlig455_034800 | Neo: Irradiation Age: - |
Mlig455_034800 {REF} {Length: 2333} {TRANSSPLICED} {RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1310_26849.1, RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1509_11589, RNA1509_43191, RNA1509_54049, RNA815_11952} |
Cumulative graph for MligTC455_41434
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.733 | 4.252 | 0.40910 | 1.00000 | |
| RegionR2 | -0.134 | 4.252 | 0.73983 | 1.00000 | |
| RegionR3 | 0.188 | 4.252 | 0.52174 | 1.00000 | |
| RegionR4 | 0.568 | 4.252 | 0.09319 | 0.29333 | |
| RegionR5 | 0.374 | 4.252 | 0.14712 | 0.39778 | |
| RegionR6 | -0.259 | 4.252 | 0.42948 | 0.99337 | |
| RegionR7 | 0.355 | 4.252 | 0.35717 | 0.99383 | |
| RegionR8 | -0.36 | 4.252 | 0.49068 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.227 | 4.252 | 0.15689 | 0.89992 | |
| RegenerationR2 | 0.084 | 4.252 | 0.81719 | 0.99447 | |
| RegenerationR3 | 0.08 | 4.252 | 0.82102 | 0.98803 | |
| RegenerationR4 | -0.265 | 4.252 | 0.45059 | 0.84227 | |
| RegenerationR5 | -0.031 | 4.252 | 0.92226 | 1.00000 | |
| RegenerationR6 | 0.594 | 4.252 | 0.12299 | 0.43125 | |
| RegenerationBL | 1.215 | 4.252 | 0.00397 | 0.05641 | |
| RegenerationTP | 0.56 | 4.252 | 0.23540 | 0.68116 |
Genes with expression patterns similar to MligTC455_41434
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41434 | 736 | 15.32 | Mlig455_034800 | Neo: Irradiation Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_034800 {REF} {Length: 2333} {TRANSSPLICED} {RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1310_26849.1, RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1509_11589, RNA1509_43191, RNA1509_54049, RNA815_11952} | |
| 2. | MligTC455_41433 | 747 | 15.57 | Mlig455_034788 | Neo: - Age: logFC(26M/2M)=0.306 |
5.879 | 0.931 | 0.996 | 0.972 | 0.988 | 0.996 | 0.996 | Mlig455_034788 {REF} {Length: 2395} {TRANSSPLICED} {RNA1509_34318, RNA1509_43191, RNA1509_49378} {RNA1310_26849.1, RNA1509_34318, RNA1509_49378} {RNA1509_34318, RNA1509_49378, RNA815_11952} | |
| 3. | MligTC455_49201 | 7138 | 148.7 | Mlig455_010810 | Neo: - Age: Down-Up-Down |
RHOA | 1.749 | - | - | - | 0.962 | 0.787 | - | Mlig455_010810 {REF} {Length: 2111} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.4]; ADP-ribosylation factor family [PF00025.23, score=41.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.3]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=353, Expect=1e-125]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=345, Expect=1e-122]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=353, Expect=6e-126]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=345, Expect=8e-123]} {Dmel: FBgn0014020, Rho1, [RH, Score=343, Expect=6e-122]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=335, Expect=4e-119]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=338, Expect=2e-120]} {RNA1509_941} {RNA1310_31233.1, RNA1509_941} {RNA1509_941, RNA815_4165.1} |
| 4. | MligTC455_25964 | 197 | 4.09 | Mlig455_028174 | Neo: - Age: - |
SF3B1 | 1.688 | - | - | - | - | 0.711 | 0.977 | Mlig455_028174 {REF} {Length: 3928} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=132.4]; HEAT repeat [PF02985.24, score=43.5]; HEAT-like repeat [PF13513.8, score=38.9]; HEAT repeats [PF13646.8, score=32.4]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [RH, Score=1743, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [RH, Score=1743, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [RH, Score=1741, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=1610, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [RH, Score=1605, Expect=0.0]} {RNA1509_34519} {RNA1310_989.1} {RNA815_553} |
| 5. | MligTC455_17816 | 811 | 16.89 | Mlig455_062825 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.393/0.00001 |
0.964 | - | - | - | - | - | 0.964 | Mlig455_062825 {REF} {Length: 551} {TRANSSPLICED} {Pfam: Mitochondrial ribosome protein 63 [PF14978.8, score=34.9]} {Smed: dd_Smed_v6_6347_0_1, dd_Smed_v6_6347_0_1, [RH, Score=79.7, Expect=2e-20]} {RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1310_49004, RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1509_15240, RNA1509_16711, RNA1509_17890, RNA815_33851} | |
| 6. | MligTC455_31736 | 229 | 4.77 | Mlig455_005581 | Neo: - Age: - |
AC006059.2 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_005581 {REF} {Length: 3051} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4164) [PF13747.8, score=18.9]} {Human: ENSG00000280571, AC006059.2, novel transcript, [Score=165, Expect=1e-42]; ENSG00000244607, CCDC13, coiled-coil domain containing 13, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000079235, Ccdc13, coiled-coil domain containing 13, [Score=142, Expect=3e-35]} {Smed: dd_Smed_v6_12055_0_1, dd_Smed_v6_12055_0_1, [Score=162, Expect=7e-43]} {RNA1509_34806} {RNA1310_11271} {RNA815_3539} |
| 7. | MligTC455_20840 | 378 | 7.87 | Mlig455_023078 | Neo: - Age: Up-Down-Up |
H6PD | 0.955 | - | - | - | - | - | 0.955 | Mlig455_023078 {REF} {Length: 2722} {TRANSSPLICED} {Pfam: Glucose-6-phosphate dehydrogenase, C-terminal domain [PF02781.18, score=99.1]; Glucose-6-phosphate dehydrogenase, NAD binding domain [PF00479.24, score=84.2]} {Human: ENSG00000049239, H6PD, hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase, [Score=167, Expect=3e-43]} {Mouse: ENSMUSG00000028980, H6pd, hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase), [Score=173, Expect=2e-45]} {Dmel: FBgn0004057, Zw, Zwischenferment, [Score=140, Expect=3e-35]} {Celegans: WBGene00007108, gspd-1, Glucose-6-phosphate 1-dehydrogenase, [Score=136, Expect=6e-34]} {Smed: dd_Smed_v6_2965_0_1, dd_Smed_v6_2965_0_1, [Score=130, Expect=3e-32]} {RNA1509_16416} {RNA1310_9105} {RNA815_2264.1} |
| 8. | MligTC455_28194 | 414 | 8.62 | Mlig455_029417 | Neo: - Age: - |
CLASRP | 0.955 | - | - | - | - | - | 0.955 | Mlig455_029417 {REF} {Length: 8883} {TRANSSPLICED} {Pfam: Alternative splicing regulator [PF09750.11, score=127.5]} {Human: ENSG00000104859, CLASRP, CLK4 associating serine/arginine rich protein, [RH, Score=196, Expect=2e-53]} {Mouse: ENSMUSG00000061028, Clasrp, CLK4-associating serine/arginine rich protein, [RH, Score=199, Expect=4e-54]} {Dmel: FBgn0039215, CG6695, [RH, Score=190, Expect=5e-50]} {Celegans: WBGene00009200, F28C1.1, [RH, Score=153, Expect=1e-38]} {Smed: dd_Smed_v6_3095_0_1, dd_Smed_v6_3095_0_1, [RH, Score=244, Expect=2e-73]} {RNA1509_27971} {RNA1310_6399.1} {RNA815_1450.1} |
| 9. | MligTC455_52537 | 492 | 10.24 | Mlig455_043851 | Neo: - Age: - |
KCNIP3 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_043851 {REF} {Length: 1620} {Pfam: EF-hand domain pair [PF13499.8, score=43.4]; EF hand [PF00036.34, score=41.6]; EF-hand domain [PF13405.8, score=37.6]; EF-hand domain pair [PF13833.8, score=27.5]; EF hand [PF13202.8, score=20.3]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=152, Expect=1e-44]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=150, Expect=5e-44]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=148, Expect=2e-43]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=145, Expect=3e-42]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=153, Expect=1e-44]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=150, Expect=3e-44]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=149, Expect=2e-43]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=146, Expect=7e-43]} {Dmel: FBgn0265595, CG44422, [Score=160, Expect=2e-46]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=132, Expect=3e-38]} {Smed: dd_Smed_v6_9434_0_1, dd_Smed_v6_9434_0_1, [Score=142, Expect=9e-42]} {RNA1509_26771} {RNA1310_17572, RNA1509_26771} {RNA1509_26771, RNA815_13854} |
| 10. | MligTC455_48942 | 1132 | 23.58 | Mlig455_065618, Mlig455_065630 | Neo: - Age: Down-Down-Up |
0.954 | - | - | - | - | - | 0.954 | Mlig455_065618 {REF} {Length: 2944} {Dmel: FBgn0261649, tinc, tincar, [Score=85.1, Expect=1e-16]} {Smed: dd_Smed_v6_5564_0_1, dd_Smed_v6_5564_0_1, [Score=188, Expect=5e-51]} {RNA1509_19669, RNA1509_53121} {RNA1310_5673, RNA1509_19669, RNA1509_53121} {RNA1509_19669, RNA1509_53121, RNA815_17154} Mlig455_065630 {REF} {Length: 2933} {Dmel: FBgn0261649, tinc, tincar, [Score=85.1, Expect=1e-16]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=191, Expect=3e-51]} {RNA1509_19669} {RNA1310_5673} {RNA815_17154} |
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