Data search
Results for MligTC455_52590
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52590 | 1002 | 20.87 | Mlig455_028324 | Neo: - Age: - |
COPB1 | Mlig455_028324 {REF} {Length: 3979} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=361.8]; Coatomer beta subunit appendage platform [PF14806.8, score=189.4]; Coatomer beta C-terminal region [PF07718.14, score=183.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=39.9]; HEAT repeats [PF13646.8, score=30.8]; HEAT repeat [PF02985.24, score=22.5]; HEAT-like repeat [PF13513.8, score=21.1]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1321, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1326, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1219, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1103, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1180, Expect=0.0]} {RNA1509_1298, RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833} {RNA1310_2383, RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833} {RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833, RNA815_1794} |
Cumulative graph for MligTC455_52590
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.387 | 4.725 | 0.08433 | 0.63190 | |
| RegionR2 | 0.359 | 4.725 | 0.37471 | 0.76956 | |
| RegionR3 | 0.405 | 4.725 | 0.21465 | 0.75569 | |
| RegionR4 | 0.335 | 4.725 | 0.38025 | 0.70467 | |
| RegionR5 | 0.695 | 4.725 | 0.01444 | 0.07609 | |
| RegionR6 | 0.124 | 4.725 | 0.72473 | 1.00000 | |
| RegionR7 | 0.87 | 4.725 | 0.03045 | 0.33208 | |
| RegionR8 | -0.403 | 4.725 | 0.52423 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.108 | 4.725 | 0.37525 | 1.00000 | |
| RegenerationR2 | 0.285 | 4.725 | 0.27640 | 0.72076 | |
| RegenerationR3 | 0.357 | 4.725 | 0.22439 | 0.65951 | |
| RegenerationR4 | 0.301 | 4.725 | 0.32256 | 0.76060 | |
| RegenerationR5 | 0.149 | 4.725 | 0.56430 | 0.89368 | |
| RegenerationR6 | 0.892 | 4.725 | 0.00280 | 0.06091 | |
| RegenerationBL | 1.2 | 4.725 | 0.00074 | 0.01863 | |
| RegenerationTP | -0.801 | 4.725 | 0.12258 | 0.53155 |
Genes with expression patterns similar to MligTC455_52590
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52590 | 1002 | 20.87 | Mlig455_028324 | Neo: - Age: - |
COPB1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028324 {REF} {Length: 3979} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=361.8]; Coatomer beta subunit appendage platform [PF14806.8, score=189.4]; Coatomer beta C-terminal region [PF07718.14, score=183.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=39.9]; HEAT repeats [PF13646.8, score=30.8]; HEAT repeat [PF02985.24, score=22.5]; HEAT-like repeat [PF13513.8, score=21.1]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1321, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1326, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1219, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1103, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1180, Expect=0.0]} {RNA1509_1298, RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833} {RNA1310_2383, RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833} {RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833, RNA815_1794} |
| 2. | MligTC455_52591 | 1549 | 32.27 | Mlig455_066162 | Neo: - Age: - |
COPB1 | 4.493 | 0.960 | 0.783 | - | 0.925 | 0.900 | 0.925 | Mlig455_066162 {REF} {Length: 3986} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=361.8]; Coatomer beta subunit appendage platform [PF14806.8, score=189.4]; Coatomer beta C-terminal region [PF07718.14, score=183.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=39.9]; HEAT repeats [PF13646.8, score=30.8]; HEAT repeat [PF02985.24, score=22.5]; HEAT-like repeat [PF13513.8, score=21.1]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1321, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1326, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1219, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1103, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1180, Expect=0.0]} {RNA1509_1298} {RNA1310_2383} {RNA815_1794} |
| 3. | MligTC455_52605 | 1101 | 22.94 | Mlig455_001284 | Neo: - |
BAG3 | 2.668 | - | 0.787 | - | - | 0.966 | 0.915 | Mlig455_001284 {REF} {Length: 2150} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=41.6]} {Human: ENSG00000151929, BAG3, BCL2 associated athanogene 3, [Score=57.4, Expect=3e-08]} {Mouse: ENSMUSG00000030847, Bag3, BCL2-associated athanogene 3, [Score=57.8, Expect=2e-08]} {Dmel: FBgn0003557, Su(dx), Suppressor of deltex, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_2334_0_1, dd_Smed_v6_2334_0_1, [Score=61.2, Expect=3e-10]} {RNA1509_18573, RNA1509_54999} {RNA1310_12149, RNA1509_54999} {RNA1509_54999, RNA815_9162.1} |
| 4. | MligTC455_39440 | 1122 | 23.36 | Mlig455_018887 | Neo: - |
GGA1 | 2.664 | - | - | - | 0.977 | 0.879 | 0.808 | Mlig455_018887 {REF} {Length: 3456} {Pfam: VHS domain [PF00790.21, score=117.5]; GAT domain [PF03127.16, score=56.7]; N-terminal extension of GAT domain [PF18308.3, score=54.8]} {Human: ENSG00000100083, GGA1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=290, Expect=2e-87]; ENSG00000125447, GGA3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=283, Expect=4e-84]} {Mouse: ENSMUSG00000020740, Gga3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=292, Expect=1e-88]; ENSMUSG00000033128, Gga1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=287, Expect=6e-87]} {Dmel: FBgn0030141, Gga, Golgi-localized, gamma-adaptin ear containing, ARF binding protein, [RH, Score=134, Expect=2e-32]} {Celegans: WBGene00000166, apt-9, AdaPTin or adaptin-related protein, [RH, Score=125, Expect=7e-30]} {Smed: dd_Smed_v6_4823_0_1, dd_Smed_v6_4823_0_1, [RH, Score=302, Expect=3e-92]} {RNA1509_2954} {RNA1310_3894.1} {RNA815_4766.1} |
| 5. | MligTC455_27765 | 336 | 7 | Mlig455_046449 | Neo: - Age: logFC(26M/2M)=-0.267 |
USP24 | 2.462 | - | - | 0.770 | - | 0.970 | 0.722 | Mlig455_046449 {REF} {Length: 8444} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=146.4]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=61.7]} {Human: ENSG00000162402, USP24, ubiquitin specific peptidase 24, [Score=385, Expect=4e-107]} {Mouse: ENSMUSG00000028514, Usp24, ubiquitin specific peptidase 24, [Score=384, Expect=7e-107]} {Dmel: FBgn0005632, faf, fat facets, [Score=256, Expect=8e-68]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=191, Expect=2e-48]} {Smed: dd_Smed_v6_2963_0_1, dd_Smed_v6_2963_0_1, [Score=242, Expect=6e-64]} {RNA1509_2363, RNA1509_29997} {RNA1310_218.1, RNA1509_29997} {RNA1509_29997, RNA815_823} |
| 6. | MligTC455_46139 | 983 | 20.47 | Mlig455_002906 | Neo: - Age: - Region-enriched R4: 1.656/0.03277 |
TMUB1 | 1.75 | - | - | 0.776 | - | 0.974 | - | Mlig455_002906 {REF} {Length: 3194} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=32.7]} {Human: ENSG00000164897, TMUB1, transmembrane and ubiquitin like domain containing 1, [RH, Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000028958, Tmub1, transmembrane and ubiquitin-like domain containing 1, [RH, Score=79.3, Expect=3e-16]} {Smed: dd_Smed_v6_5590_0_1, dd_Smed_v6_5590_0_1, [RH, Score=132, Expect=3e-35]} {RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737} {RNA1310_3418.1, RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737} {RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737, RNA815_1023} |
| 7. | MligTC455_25736 | 663 | 13.81 | Mlig455_008189 | Neo: - Age: Up-Down-Down |
CUL1 | 1.672 | - | - | - | 0.709 | - | 0.963 | Mlig455_008189 {REF} {Length: 7073} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=559.3]; Cullin protein neddylation domain [PF10557.11, score=87.5]; MarR family [PF12802.9, score=22.1]} {Human: ENSG00000055130, CUL1, cullin 1, [RH, Score=714, Expect=0.0]} {Mouse: ENSMUSG00000029686, Cul1, cullin 1, [RH, Score=714, Expect=0.0]} {Dmel: FBgn0015509, Cul1, Cullin 1, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00000836, cul-1, Cullin-1, [RH, Score=509, Expect=2e-169]} {Smed: dd_Smed_v6_5770_0_1, dd_Smed_v6_5770_0_1, [RH, Score=616, Expect=0.0]} {RNA1509_15316, RNA1509_18310, RNA1509_2856} {RNA1310_2974, RNA1509_15316, RNA1509_18310, RNA1509_2856} {RNA1509_15316, RNA1509_18310, RNA1509_2856, RNA815_213.1} |
| 8. | MligTC455_40570 | 840 | 17.51 | Mlig455_012265, Mlig455_012710, Mlig455_054461 | Neo: - Age: Down-Up-Up Region-enriched R2: 2.275/0.00464 |
BUD31, SMOX | 0.958 | - | - | - | - | 0.958 | - | Mlig455_012265 {REF} {Length: 722} {Pfam: Lectin C-type domain [PF00059.23, score=35.8]} {Smed: dd_Smed_v6_85740_0_1, dd_Smed_v6_85740_0_1, [Score=45.8, Expect=2e-06]} {RNA1509_20946} {RNA1310_41618} {RNA815_32434} Mlig455_012710 {REF} {Length: 2074} {TRANSSPLICED} {Pfam: G10 protein [PF01125.19, score=210.3]} {Human: ENSG00000106245, BUD31, BUD31 homolog, [RH, Score=246, Expect=3e-85]} {Mouse: ENSMUSG00000038722, Bud31, BUD31 homolog, [RH, Score=246, Expect=2e-85]} {Dmel: FBgn0001491, l(1)10Bb, lethal (1) 10Bb, [RH, Score=246, Expect=3e-85]} {Celegans: WBGene00007400, bud-31, Protein BUD31 homolog, [RH, Score=220, Expect=5e-75]} {Smed: dd_Smed_v6_1359_0_1, dd_Smed_v6_1359_0_1, [RH, Score=228, Expect=2e-78]} {RNA1509_10529, RNA1509_4045} {RNA1310_32248, RNA1509_10529} {RNA1509_10529, RNA815_25391} Mlig455_054461 {REF} {Length: 1413} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=102.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=50.6]; FAD dependent oxidoreductase [PF12831.9, score=29.8]; FAD binding domain [PF00890.26, score=27.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=24.1]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=23.0]; HI0933-like protein [PF03486.16, score=22.7]; FAD dependent oxidoreductase [PF01266.26, score=21.3]; FAD binding domain [PF01494.21, score=20.0]; Glucose inhibited division protein A [PF01134.24, score=17.9]} {Human: ENSG00000088826, SMOX, spermine oxidase, [Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000025464, Paox, polyamine oxidase (exo-N4-amino), [Score=76.3, Expect=1e-14]} {Dmel: FBgn0035943, CG5653, [Score=84.7, Expect=1e-17]} {Smed: dd_Smed_v6_20536_0_1, dd_Smed_v6_20536_0_1, [Score=47.4, Expect=8e-06]} {RNA1509_44166} {RNA1310_52978} {RNA815_38183} |
| 9. | MligTC455_48447 | 2514 | 52.37 | Mlig455_029673 | Neo: - Age: - |
CCNG2 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_029673 {REF} {Length: 4016} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=42.7]} {Human: ENSG00000138764, CCNG2, cyclin G2, [RH, Score=99.0, Expect=6e-23]} {Mouse: ENSMUSG00000029385, Ccng2, cyclin G2, [RH, Score=102, Expect=6e-24]} {Dmel: FBgn0039858, CycG, Cyclin G, [RH, Score=97.1, Expect=1e-21]} {Smed: dd_Smed_v6_6866_0_1, dd_Smed_v6_6866_0_1, [RH, Score=117, Expect=9e-30]} {RNA1509_1191, RNA1509_14812, RNA1509_27451, RNA1509_34405, RNA1509_37028, RNA1509_48703, RNA1509_53871} {RNA1310_9744, RNA1509_1191, RNA1509_14812, RNA1509_27451, RNA1509_34405, RNA1509_37028, RNA1509_48703, RNA1509_53871} {RNA1509_1191, RNA1509_14812, RNA1509_27451, RNA1509_34405, RNA1509_37028, RNA1509_48703, RNA1509_53871, RNA815_3033.1} |
| 10. | MligTC455_25594 | 546 | 11.38 | Mlig455_010729 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_010729 {REF} {Length: 6514} {TRANSSPLICED} {RNA1509_4078} {RNA1310_3072, RNA1509_4078} {RNA1509_4078, RNA815_5186} | |
| 11. | MligTC455_53601 | 467 | 9.73 | Mlig455_013871, Mlig455_057739 | Neo: Irradiation Age: - Region-enriched R5: 1.994/0.00213 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_013871 {REF} {Length: 1802} {TRANSSPLICED} {RNA1509_31579, RNA1509_31889} {RNA1310_30174, RNA1509_31579, RNA1509_31889} {RNA1509_31579, RNA1509_31889, RNA815_21842.1} Mlig455_057739 {REF} {Length: 1793} {TRANSSPLICED} {RNA1509_31579} {RNA1310_30174} {RNA815_21842.1} |
|
| 12. | MligTC455_15550 | 944 | 19.67 | Mlig455_022094, Mlig455_053631 | Neo: Irradiation Age: - |
SBF1, SBF2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_022094 {REF} {Length: 9161} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=250.6]; PH domain [PF00169.31, score=28.6]} {Human: ENSG00000100241, SBF1, SET binding factor 1, [Score=196, Expect=1e-49]} {Mouse: ENSMUSG00000036529, Sbf1, SET binding factor 1, [Score=194, Expect=3e-49]} {Dmel: FBgn0025802, Sbf, SET domain binding factor, [Score=186, Expect=4e-47]} {Celegans: WBGene00003475, mtm-1, Myotubularin-related protein 1, [Score=141, Expect=2e-34]} {Smed: dd_Smed_v6_7244_0_1, dd_Smed_v6_7244_0_1, [Score=201, Expect=8e-52]} {RNA1509_52361} {RNA1310_177.2} {RNA815_73.1} Mlig455_053631 {REF} {Length: 9263} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=248.1]; DENN (AEX-3) domain [PF02141.23, score=108.6]; Myotubularin protein [PF12335.10, score=89.2]; uDENN domain [PF03456.20, score=30.7]; PH domain [PF00169.31, score=27.6]} {Human: ENSG00000133812, SBF2, SET binding factor 2, [Score=448, Expect=2e-127]; ENSG00000100241, SBF1, SET binding factor 1, [Score=436, Expect=9e-124]} {Mouse: ENSMUSG00000038371, Sbf2, SET binding factor 2, [Score=452, Expect=3e-129]; ENSMUSG00000036529, Sbf1, SET binding factor 1, [Score=431, Expect=3e-122]} {Dmel: FBgn0025802, Sbf, SET domain binding factor, [Score=308, Expect=9e-84]} {Celegans: WBGene00003475, mtm-1, Myotubularin-related protein 1, [Score=142, Expect=1e-34]} {Smed: dd_Smed_v6_7244_0_1, dd_Smed_v6_7244_0_1, [Score=405, Expect=1e-113]} {RNA1509_52361} {RNA1310_177.1} {RNA815_73.1} |
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