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Results for MligTC455_39440

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39440 1122 23.36 Mlig455_018887

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.697

GGA1 Mlig455_018887 {REF} {Length: 3456} {Pfam: VHS domain [PF00790.21, score=117.5]; GAT domain [PF03127.16, score=56.7]; N-terminal extension of GAT domain [PF18308.3, score=54.8]} {Human: ENSG00000100083, GGA1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=290, Expect=2e-87]; ENSG00000125447, GGA3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=283, Expect=4e-84]} {Mouse: ENSMUSG00000020740, Gga3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=292, Expect=1e-88]; ENSMUSG00000033128, Gga1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=287, Expect=6e-87]} {Dmel: FBgn0030141, Gga, Golgi-localized, gamma-adaptin ear containing, ARF binding protein, [RH, Score=134, Expect=2e-32]} {Celegans: WBGene00000166, apt-9, AdaPTin or adaptin-related protein, [RH, Score=125, Expect=7e-30]} {Smed: dd_Smed_v6_4823_0_1, dd_Smed_v6_4823_0_1, [RH, Score=302, Expect=3e-92]} {RNA1509_2954} {RNA1310_3894.1} {RNA815_4766.1}

Cumulative graph for MligTC455_39440

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.461 4.874 0.61486 1.00000
RegionR2 -0.107 4.874 0.77832 1.00000
RegionR3 0.115 4.874 0.70102 1.00000
RegionR4 0.437 4.874 0.19372 0.47102
RegionR5 0.253 4.874 0.33727 0.68381
RegionR6 -0.265 4.874 0.39982 0.97166
RegionR7 -0.114 4.874 0.78340 1.00000
RegionR8 0.141 4.874 0.77891 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.374 4.874 0.12673 0.85806
RegenerationR2 0.261 4.874 0.39202 0.80909
RegenerationR3 0.1 4.874 0.76340 0.96883
RegenerationR4 -0.061 4.874 0.84800 1.00000
RegenerationR5 0.207 4.874 0.49328 0.85492
RegenerationR6 0.509 4.874 0.13429 0.44988
RegenerationBL 0.842 4.874 0.02815 0.18606
RegenerationTP -0.345 4.874 0.46282 0.87614


Genes with expression patterns similar to MligTC455_39440

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39440 1122 23.36 Mlig455_018887

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.697

GGA1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_018887 {REF} {Length: 3456} {Pfam: VHS domain [PF00790.21, score=117.5]; GAT domain [PF03127.16, score=56.7]; N-terminal extension of GAT domain [PF18308.3, score=54.8]} {Human: ENSG00000100083, GGA1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=290, Expect=2e-87]; ENSG00000125447, GGA3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=283, Expect=4e-84]} {Mouse: ENSMUSG00000020740, Gga3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=292, Expect=1e-88]; ENSMUSG00000033128, Gga1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=287, Expect=6e-87]} {Dmel: FBgn0030141, Gga, Golgi-localized, gamma-adaptin ear containing, ARF binding protein, [RH, Score=134, Expect=2e-32]} {Celegans: WBGene00000166, apt-9, AdaPTin or adaptin-related protein, [RH, Score=125, Expect=7e-30]} {Smed: dd_Smed_v6_4823_0_1, dd_Smed_v6_4823_0_1, [RH, Score=302, Expect=3e-92]} {RNA1509_2954} {RNA1310_3894.1} {RNA815_4766.1}
2. MligTC455_52590 1002 20.87 Mlig455_028324

Neo: -

Age: -

COPB1 2.664 - - - 0.977 0.879 0.808 Mlig455_028324 {REF} {Length: 3979} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=361.8]; Coatomer beta subunit appendage platform [PF14806.8, score=189.4]; Coatomer beta C-terminal region [PF07718.14, score=183.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=39.9]; HEAT repeats [PF13646.8, score=30.8]; HEAT repeat [PF02985.24, score=22.5]; HEAT-like repeat [PF13513.8, score=21.1]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1321, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1326, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1219, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1103, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1180, Expect=0.0]} {RNA1509_1298, RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833} {RNA1310_2383, RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833} {RNA1509_17465, RNA1509_22412, RNA1509_33721, RNA1509_38833, RNA815_1794}
3. MligTC455_31399 2478 51.63 Mlig455_015358

Neo: -

Age: -

Region-enriched R4: 1.353/0.00060

UQCRC1 1.803 0.850 - - - 0.953 - Mlig455_015358 {REF} {Length: 2043} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=149.3]; Peptidase M16 inactive domain [PF05193.23, score=80.7]} {Human: ENSG00000010256, UQCRC1, ubiquinol-cytochrome c reductase core protein 1, [Score=434, Expect=2e-148]; ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [Score=424, Expect=8e-145]} {Mouse: ENSMUSG00000107235, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [RH, Score=424, Expect=7e-145]; ENSMUSG00000025651, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [RH, Score=424, Expect=7e-145]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [Score=446, Expect=1e-153]} {Celegans: WBGene00018963, ucr-1, Cytochrome b-c1 complex subunit 1, mitochondrial, [RH, Score=305, Expect=1e-98]} {Smed: dd_Smed_v6_729_0_1, dd_Smed_v6_729_0_1, [RH, Score=362, Expect=3e-121]} {RNA1509_16826, RNA1509_19341} {RNA1310_14001.1, RNA1509_16826, RNA1509_19341} {RNA1509_16826, RNA1509_19341, RNA815_4919}
4. MligTC455_33128 1820 37.91 Mlig455_065593

Neo: -

Age: -

1.703 - - - 0.959 0.744 - Mlig455_065593 {REF} {Length: 2622} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=38.8]; HMG-box domain [PF09011.12, score=32.9]} {RNA1509_16997, RNA1509_20373, RNA1509_22468, RNA1509_29220, RNA1509_5450} {RNA1310_21659.1, RNA1509_16997, RNA1509_20373, RNA1509_22468, RNA1509_29220, RNA1509_5450} {RNA1509_16997, RNA1509_20373, RNA1509_22468, RNA1509_29220, RNA1509_5450, RNA815_736.1}
5. MligTC455_35742 2981 62.11 Mlig455_012742

Neo: -

Age: -

Regeneration-upregulated BL: 1.197

Regeneration-enriched BL: 1.197

STT3B 1.702 - - - - 0.745 0.957 Mlig455_012742 {REF} {Length: 4048} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=486.2]} {Human: ENSG00000163527, STT3B, STT3B, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1140, Expect=0.0]} {Mouse: ENSMUSG00000032437, Stt3b, STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae), [RH, Score=1132, Expect=0.0]} {Dmel: FBgn0011336, Stt3B, Catalytic subunit 3B of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [RH, Score=1013, Expect=0.0]} {Smed: dd_Smed_v6_1614_0_1, dd_Smed_v6_1614_0_1, [RH, Score=1228, Expect=0.0]} {RNA1509_1360, RNA1509_27001, RNA1509_6993} {RNA1310_2492.1, RNA1509_1360, RNA1509_27001, RNA1509_6993} {RNA1509_1360, RNA1509_27001, RNA1509_6993, RNA815_757}
6. MligTC455_44202 781 16.28 Mlig455_025288

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.651

Region-enriched R4: 1.041/0.01600

BCKDHA 1.672 - - 0.720 - - 0.952 Mlig455_025288 {REF} {Length: 2205} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=305.3]; 1-deoxy-D-xylulose-5-phosphate synthase [PF13292.8, score=22.4]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=21.2]} {Human: ENSG00000248098, BCKDHA, branched chain keto acid dehydrogenase E1, alpha polypeptide, [RH, Score=501, Expect=5e-176]; ENSG00000255730, AC011462.1, novel protein, [RH, Score=499, Expect=1e-174]} {Mouse: ENSMUSG00000060376, Bckdha, branched chain ketoacid dehydrogenase E1, alpha polypeptide, [RH, Score=503, Expect=4e-177]} {Dmel: FBgn0037709, CG8199, [RH, Score=458, Expect=9e-160]} {Celegans: WBGene00012713, bckd-1A, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, [RH, Score=481, Expect=6e-169]} {Smed: dd_Smed_v6_3288_0_1, dd_Smed_v6_3288_0_1, [RH, Score=488, Expect=7e-172]} {RNA1509_21323} {RNA1310_8924.1} {RNA815_7812}
7. MligTC455_33127 1782 37.12 Mlig455_059339

Neo: -

Age: -

1.664 - - - 0.957 0.707 - Mlig455_059339 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=38.7]; HMG-box domain [PF09011.12, score=32.9]} {RNA1509_33113, RNA1509_5450} {RNA1310_21659.1, RNA1509_33113} {RNA1509_33113, RNA815_736.1}
8. MligTC455_47092 605 12.61 Mlig455_022413

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.333

DENND4A 0.973 - - - 0.973 - - Mlig455_022413 {REF} {Length: 7653} {TRANSSPLICED} {Pfam: DENN (AEX-3) domain [PF02141.23, score=135.9]; uDENN domain [PF03456.20, score=48.2]; dDENN domain [PF03455.21, score=33.4]; Multivesicular body subunit 12 [PF10240.11, score=27.9]} {Human: ENSG00000174485, DENND4A, DENN domain containing 4A, [RH, Score=518, Expect=2e-153]; ENSG00000137145, DENND4C, DENN domain containing 4C, [RH, Score=515, Expect=5e-152]; ENSG00000198837, DENND4B, DENN domain containing 4B, [RH, Score=493, Expect=2e-149]} {Mouse: ENSMUSG00000053641, Dennd4a, DENN/MADD domain containing 4A, [RH, Score=520, Expect=4e-154]; ENSMUSG00000038024, Dennd4c, DENN/MADD domain containing 4C, [RH, Score=498, Expect=5e-146]} {Dmel: FBgn0025864, Crag, Calmodulin-binding protein related to a Rab3 GDP/GTP exchange protein, [RH, Score=478, Expect=1e-140]} {Celegans: WBGene00018681, denn-4, DENN domain type RAB GEF, [RH, Score=443, Expect=1e-129]} {Smed: dd_Smed_v6_2463_0_1, dd_Smed_v6_2463_0_1, [RH, Score=353, Expect=4e-99]} {RNA1509_30397, RNA1509_54564, RNA1509_55790} {RNA1310_724.1, RNA1509_30397, RNA1509_54564, RNA1509_55790} {RNA1509_30397, RNA1509_54564, RNA1509_55790, RNA815_711}
9. MligTC455_48447 2514 52.37 Mlig455_029673

Neo: -

Age: -

CCNG2 0.966 - - - 0.966 - - Mlig455_029673 {REF} {Length: 4016} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=42.7]} {Human: ENSG00000138764, CCNG2, cyclin G2, [RH, Score=99.0, Expect=6e-23]} {Mouse: ENSMUSG00000029385, Ccng2, cyclin G2, [RH, Score=102, Expect=6e-24]} {Dmel: FBgn0039858, CycG, Cyclin G, [RH, Score=97.1, Expect=1e-21]} {Smed: dd_Smed_v6_6866_0_1, dd_Smed_v6_6866_0_1, [RH, Score=117, Expect=9e-30]} {RNA1509_1191, RNA1509_14812, RNA1509_27451, RNA1509_34405, RNA1509_37028, RNA1509_48703, RNA1509_53871} {RNA1310_9744, RNA1509_1191, RNA1509_14812, RNA1509_27451, RNA1509_34405, RNA1509_37028, RNA1509_48703, RNA1509_53871} {RNA1509_1191, RNA1509_14812, RNA1509_27451, RNA1509_34405, RNA1509_37028, RNA1509_48703, RNA1509_53871, RNA815_3033.1}
10. MligTC455_34500 3224 67.16 Mlig455_029770, Mlig455_029924

Neo: -

Age: logFC(26M/2M)=0.194

NPLOC4 0.957 0.957 - - - - -

Mlig455_029770 {REF} {Length: 3121} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=297.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=42.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=431, Expect=9e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=434, Expect=2e-145]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=398, Expect=3e-131]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=359, Expect=1e-117]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=421, Expect=3e-140]} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA1509_6797} {RNA1310_13992, RNA1509_24296, RNA1509_30091, RNA1509_32827} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA815_5567}

Mlig455_029924 {REF} {Length: 3589} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=298.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=41.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=433, Expect=1e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=438, Expect=9e-147]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=402, Expect=9e-133]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=361, Expect=4e-118]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=427, Expect=2e-142]} {RNA1509_6797} {RNA1310_13992} {RNA815_5567}
11. MligTC455_34705 812 16.91 Mlig455_059168

Neo: -

Age: -

AGO2 0.957 - - - 0.957 - - Mlig455_059168 {REF} {Length: 7867} {Pfam: Piwi domain [PF02171.19, score=363.8]; Mid domain of argonaute [PF16487.7, score=113.6]; N-terminal domain of argonaute [PF16486.7, score=92.1]; PAZ domain [PF02170.24, score=81.0]; Argonaute linker 1 domain [PF08699.12, score=78.2]; Argonaute linker 2 domain [PF16488.7, score=52.0]} {Human: ENSG00000123908, AGO2, argonaute 2, RISC catalytic component, [RH, Score=1248, Expect=0.0]; ENSG00000092847, AGO1, argonaute 1, RISC catalytic component, [RH, Score=1230, Expect=0.0]; ENSG00000126070, AGO3, argonaute 3, RISC catalytic component, [RH, Score=1220, Expect=0.0]; ENSG00000134698, AGO4, argonaute 4, RISC catalytic component, [RH, Score=1201, Expect=0.0]} {Mouse: ENSMUSG00000036698, Ago2, argonaute RISC catalytic subunit 2, [RH, Score=1251, Expect=0.0]; ENSMUSG00000041530, Ago1, argonaute RISC catalytic subunit 1, [RH, Score=1230, Expect=0.0]; ENSMUSG00000028842, Ago3, argonaute RISC catalytic subunit 3, [RH, Score=1218, Expect=0.0]; ENSMUSG00000042500, Ago4, argonaute RISC catalytic subunit 4, [RH, Score=1200, Expect=0.0]} {Dmel: FBgn0262739, AGO1, Argonaute-1, [RH, Score=1323, Expect=0.0]} {Celegans: WBGene00000105, alg-1, Argonaute-like, [RH, Score=1245, Expect=0.0]} {Smed: dd_Smed_v6_3861_0_1, dd_Smed_v6_3861_0_1, [RH, Score=1427, Expect=0.0]} {RNA1509_34423} {RNA1310_7009} {RNA815_1509.1}
12. MligTC455_27747 2105 43.85 Mlig455_026626

Neo: -

Age: -

USP43 0.956 - - - 0.956 - - Mlig455_026626 {REF} {Length: 4552} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=211.3]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=52.1]} {Human: ENSG00000154914, USP43, ubiquitin specific peptidase 43, [RH, Score=285, Expect=5e-80]} {Mouse: ENSMUSG00000020905, Usp43, ubiquitin specific peptidase 43, [RH, Score=287, Expect=1e-80]; ENSMUSG00000063317, Usp31, ubiquitin specific peptidase 31, [RH, Score=274, Expect=1e-75]} {Dmel: FBgn0050421, Usp15-31, Ubiquitin specific protease 15/31, [RH, Score=248, Expect=2e-67]} {Celegans: WBGene00019259, H34C03.2, Ubiquitin carboxyl-terminal hydrolase, [Score=113, Expect=3e-25]} {Smed: dd_Smed_v6_9753_0_1, dd_Smed_v6_9753_0_1, [RH, Score=218, Expect=3e-58]} {RNA1509_1499, RNA1509_50475, RNA1509_57789} {RNA1310_1291, RNA1509_50475, RNA1509_57789} {RNA1509_50475, RNA1509_57789, RNA815_779.1}
13. MligTC455_53601 467 9.73 Mlig455_013871, Mlig455_057739

Neo: Irradiation

Age: -

Region-enriched R5: 1.994/0.00213

0.952 - - - 0.952 - -

Mlig455_013871 {REF} {Length: 1802} {TRANSSPLICED} {RNA1509_31579, RNA1509_31889} {RNA1310_30174, RNA1509_31579, RNA1509_31889} {RNA1509_31579, RNA1509_31889, RNA815_21842.1}

Mlig455_057739 {REF} {Length: 1793} {TRANSSPLICED} {RNA1509_31579} {RNA1310_30174} {RNA815_21842.1}
14. MligTC455_41161 1723 35.89 Mlig455_015003, Mlig455_038650

Neo: -

Age: -

Regeneration-upregulated R6: 1.721

Regeneration-enriched R6: 1.721

RBBP6 0.95 - - - - - 0.950

Mlig455_015003 {REF} {Length: 3795} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.9]; Ring finger domain [PF13639.8, score=20.2]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=78.2, Expect=7e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=78.2, Expect=5e-14]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=96.3, Expect=9e-20]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=61.6, Expect=3e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [Score=80.1, Expect=3e-15]} {RNA1509_48313, RNA1509_5537} {RNA1310_2775, RNA1509_48313} {RNA1509_48313, RNA815_5708}

Mlig455_038650 {REF} {Length: 3834} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=28.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; Ring finger domain [PF13639.8, score=21.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=80.9, Expect=1e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=80.5, Expect=9e-15]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=62.0, Expect=2e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [RH, Score=85.9, Expect=4e-17]} {RNA1509_5537} {RNA1310_2775} {RNA815_5708}

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