M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_52709

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52709 4470 93.12 Mlig455_056728

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.481

 CROCC Mlig455_056728 {REF} {Length: 9759} {Pfam: Ciliary rootlet component, centrosome cohesion [PF15035.8, score=193.2]; Septation ring formation regulator, EzrA [PF06160.14, score=19.1]} {Human: ENSG00000058453, CROCC, ciliary rootlet coiled-coil, rootletin, [Score=841, Expect=0.0]} {Mouse: ENSMUSG00000040860, Crocc, ciliary rootlet coiled-coil, rootletin, [Score=845, Expect=0.0]} {Dmel: FBgn0039152, Root, Rootletin, [Score=372, Expect=9e-104]} {Celegans: WBGene00022500, lfi-1, Lin-5 (Five) Interacting protein, [RH, Score=165, Expect=2e-40]} {Smed: dd_Smed_v6_1404_0_1, dd_Smed_v6_1404_0_1, [RH, Score=1895, Expect=0.0]} {RNA1509_137} {RNA1310_2877.1} {RNA815_204}

Cumulative graph for MligTC455_52709

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.321 6.623 0.57037 1.00000
RegionR2 0.994 6.623 0.00370 0.05292
RegionR3 0.308 6.623 0.30036 0.84241
RegionR4 0.152 6.623 0.66488 0.96327
RegionR5 -0.553 6.623 0.06768 0.23232
RegionR6 -0.18 6.623 0.55179 1.00000
RegionR7 -0.242 6.623 0.45981 1.00000
RegionR8 -0.159 6.623 0.66304 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.328 6.623 0.65963 1.00000
RegenerationR2 -0.226 6.623 0.53034 0.88433
RegenerationR3 -0.309 6.623 0.41072 0.80926
RegenerationR4 -0.353 6.623 0.36565 0.79073
RegenerationR5 -0.339 6.623 0.36692 0.77749
RegenerationR6 -0.421 6.623 0.27385 0.62353
RegenerationBL -0.309 6.623 0.40139 0.77031
RegenerationTP -0.464 6.623 0.23840 0.68429


Genes with expression patterns similar to MligTC455_52709

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52709 4470 93.12 Mlig455_056728

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.481

 CROCC 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_056728 {REF} {Length: 9759} {Pfam: Ciliary rootlet component, centrosome cohesion [PF15035.8, score=193.2]; Septation ring formation regulator, EzrA [PF06160.14, score=19.1]} {Human: ENSG00000058453, CROCC, ciliary rootlet coiled-coil, rootletin, [Score=841, Expect=0.0]} {Mouse: ENSMUSG00000040860, Crocc, ciliary rootlet coiled-coil, rootletin, [Score=845, Expect=0.0]} {Dmel: FBgn0039152, Root, Rootletin, [Score=372, Expect=9e-104]} {Celegans: WBGene00022500, lfi-1, Lin-5 (Five) Interacting protein, [RH, Score=165, Expect=2e-40]} {Smed: dd_Smed_v6_1404_0_1, dd_Smed_v6_1404_0_1, [RH, Score=1895, Expect=0.0]} {RNA1509_137} {RNA1310_2877.1} {RNA815_204}
2. MligTC455_52708 2548 53.08 Mlig455_033971

Neo: -

Age: -

Region-specific R2: 1.697

Region-enriched R2: 1.605/0.00000

 CROCC 5.348 0.870 0.864 0.888 0.966 0.876 0.884 Mlig455_033971 {REF} {Length: 8201} {TRANSSPLICED} {Pfam: Ciliary rootlet component, centrosome cohesion [PF15035.8, score=206.8]; Septation ring formation regulator, EzrA [PF06160.14, score=19.8]} {Human: ENSG00000058453, CROCC, ciliary rootlet coiled-coil, rootletin, [Score=885, Expect=0.0]} {Mouse: ENSMUSG00000040860, Crocc, ciliary rootlet coiled-coil, rootletin, [Score=889, Expect=0.0]} {Dmel: FBgn0039152, Root, Rootletin, [Score=372, Expect=1e-103]} {Celegans: WBGene00022500, lfi-1, Lin-5 (Five) Interacting protein, [RH, Score=167, Expect=7e-41]} {Smed: dd_Smed_v6_1404_0_1, dd_Smed_v6_1404_0_1, [RH, Score=1909, Expect=0.0]} {RNA1509_137} {RNA1310_2877.1} {RNA815_204}
3. MligTC455_41286 4033 84.01 Mlig455_001654

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.221

 4.102 0.763 - 0.777 0.756 0.855 0.951 Mlig455_001654 {REF} {Length: 1603} {Smed: dd_Smed_v6_4625_0_1, dd_Smed_v6_4625_0_1, [RH, Score=148, Expect=4e-44]} {RNA1509_17667, RNA1509_22820, RNA1509_31710, RNA1509_41362, RNA1509_5500} {RNA1310_18662, RNA1509_17667, RNA1509_22820, RNA1509_31710, RNA1509_41362} {RNA1509_17667, RNA1509_22820, RNA1509_31710, RNA1509_41362, RNA815_10004.1}
4. MligTC455_43616 1798 37.45 Mlig455_024513

Neo: -

Age: logFC(26M/2M)=-0.338

Region-enriched R2: 1.066/0.02738

 CFAP57 3.459 - 0.903 0.965 0.827 0.764 - Mlig455_024513 {REF} {Length: 5805} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=65.8]; Crescentin protein [PF19220.2, score=26.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=25.5]; Autophagy protein 16 (ATG16) [PF08614.13, score=24.0]; Coiled-coil region of CCDC155 or KASH [PF14662.8, score=20.0]} {Human: ENSG00000243710, CFAP57, cilia and flagella associated protein 57, [RH, Score=1363, Expect=0.0]} {Mouse: ENSMUSG00000028730, Cfap57, cilia and flagella associated protein 57, [RH, Score=1360, Expect=0.0]} {Dmel: FBgn0034745, CG4329, [RH, Score=496, Expect=5e-155]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_3323_0_1, dd_Smed_v6_3323_0_1, [RH, Score=1620, Expect=0.0]} {RNA1509_14259, RNA1509_18569, RNA1509_42897, RNA1509_836} {RNA1310_1737, RNA1509_14259, RNA1509_18569, RNA1509_42897} {RNA1509_14259, RNA1509_18569, RNA1509_42897, RNA815_558}
5. MligTC455_54200 3677 76.6 Mlig455_042328, Mlig455_047109

Neo: -

Age: logFC(26M/2M)=-0.234

 SAXO1 3.444 - - 0.954 0.902 0.820 0.768

Mlig455_042328 {REF} {Length: 2569} {Pfam: STOP protein [PF05217.14, score=19.1]} {Human: ENSG00000155875, SAXO1, stabilizer of axonemal microtubules 1, [RH, Score=205, Expect=3e-60]} {Mouse: ENSMUSG00000028492, Saxo1, stabilizer of axonemal microtubules 1, [RH, Score=193, Expect=9e-56]} {Celegans: WBGene00011630, T08G11.3, [Score=70.1, Expect=1e-12]} {Smed: dd_Smed_v6_3695_0_1, dd_Smed_v6_3695_0_1, [RH, Score=469, Expect=4e-163]} {RNA1509_2191} {RNA1310_8632, RNA1509_2191} {RNA1509_2191, RNA815_4452}

Mlig455_047109 {REF} {Length: 2569} {Pfam: STOP protein [PF05217.14, score=19.1]} {Human: ENSG00000155875, SAXO1, stabilizer of axonemal microtubules 1, [RH, Score=205, Expect=3e-60]} {Mouse: ENSMUSG00000028492, Saxo1, stabilizer of axonemal microtubules 1, [RH, Score=193, Expect=9e-56]} {Celegans: WBGene00011630, T08G11.3, [Score=70.1, Expect=1e-12]} {Smed: dd_Smed_v6_3695_0_1, dd_Smed_v6_3695_0_1, [RH, Score=469, Expect=4e-163]} {RNA1509_2191} {RNA1310_8632} {RNA815_4452}
6. MligTC455_46270 3983 82.98 Mlig455_033641, Mlig455_033662

Neo: -

Age: logFC(26M/2M)=-0.432

Region-enriched R2: 1.175/0.03406

 AL096814.1 3.389 - - 0.959 0.768 0.848 0.814

Mlig455_033641 {REF} {Length: 2204} {Human: ENSG00000214732, AL096814.1, novel protein, [RH, Score=53.9, Expect=8e-09]} {Mouse: ENSMUSG00000116001, 1700001C19Rik, RIKEN cDNA 1700001C19 gene, [RH, Score=52.8, Expect=7e-08]; ENSMUSG00000047150, 1700001C19Rik, RIKEN cDNA 1700001C19 gene, [RH, Score=52.8, Expect=7e-08]} {Smed: dd_Smed_v6_9787_0_1, dd_Smed_v6_9787_0_1, [Score=44.7, Expect=4e-06]} {RNA1509_28773, RNA1509_31687, RNA1509_3298} {RNA1310_21949.1, RNA1509_28773, RNA1509_31687, RNA1509_3298} {RNA1509_28773, RNA1509_31687, RNA1509_3298, RNA815_8979}

Mlig455_033662 {REF} {Length: 2651} {Human: ENSG00000214732, AL096814.1, novel protein, [RH, Score=53.9, Expect=8e-09]} {Mouse: ENSMUSG00000047150, 1700001C19Rik, RIKEN cDNA 1700001C19 gene, [RH, Score=52.8, Expect=7e-08]; ENSMUSG00000116001, 1700001C19Rik, RIKEN cDNA 1700001C19 gene, [RH, Score=52.8, Expect=7e-08]} {Smed: dd_Smed_v6_9787_0_1, dd_Smed_v6_9787_0_1, [Score=44.3, Expect=4e-06]} {RNA1509_15061, RNA1509_28773} {RNA1310_21949.1, RNA1509_15061} {RNA1509_15061, RNA815_8979}
7. MligTC455_44145 1616 33.67 Mlig455_013447

Neo: -

Age: -

 3.207 - 0.725 0.960 0.778 0.744 - Mlig455_013447 {REF} {Length: 841} {RNA1509_20243} {RNA1310_1688.1} {RNA815_1415.1}
8. MligTC455_44958 13148 273.91 Mlig455_031389

Neo: -

Age: Down-Down-Up

 NXN 2.621 - - 0.959 0.788 - 0.874 Mlig455_031389 {REF} {Length: 817} {Pfam: Thioredoxin-like [PF13905.8, score=94.0]; Redoxin [PF08534.12, score=58.9]; AhpC/TSA family [PF00578.23, score=48.2]; Thioredoxin [PF00085.22, score=43.4]; Thioredoxin-like domain [PF13098.8, score=33.4]; Thioredoxin [PF14595.8, score=22.3]; Thioredoxin-like [PF13899.8, score=21.7]} {Human: ENSG00000167693, NXN, nucleoredoxin, [RH, Score=91.7, Expect=4e-22]} {Mouse: ENSMUSG00000020844, Nxn, nucleoredoxin, [RH, Score=93.2, Expect=2e-22]} {Celegans: WBGene00020613, T20D4.7, [RH, Score=121, Expect=1e-35]} {RNA1509_17746, RNA1509_2823, RNA1509_9863} {RNA1310_36941, RNA1509_17746, RNA1509_2823, RNA1509_9863} {RNA1509_17746, RNA1509_2823, RNA1509_9863, RNA815_16980}
9. MligTC455_34893 231 4.8 Mlig455_066819

Neo: -

Age: Down-Up-Down

 CYP2U1 2.612 - - 0.960 0.775 0.877 - Mlig455_066819 {REF} {Length: 1584} {Pfam: Cytochrome P450 [PF00067.24, score=109.5]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=95.5, Expect=9e-24]; ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [Score=92.4, Expect=3e-22]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=91.3, Expect=9e-22]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=91.3, Expect=6e-22]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=90.5, Expect=1e-21]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=90.5, Expect=1e-21]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=90.1, Expect=1e-21]; ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [Score=89.7, Expect=4e-22]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=89.0, Expect=3e-21]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=87.8, Expect=1e-20]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=87.4, Expect=1e-20]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=76.3, Expect=9e-17]} {Celegans: WBGene00016768, cyp-33E1, CYtochrome P450 family, [Score=89.0, Expect=2e-21]} {Smed: dd_Smed_v6_5344_0_2, dd_Smed_v6_5344_0_2, [Score=102, Expect=4e-26]} {RNA1509_39728} {RNA1310_10949.2} {RNA815_7611}
10. MligTC455_40897 1645 34.27 Mlig455_063519

Neo: -

Age: -

 2.565 - - 0.956 0.816 - 0.793 Mlig455_063519 {REF} {Length: 1370} {Pfam: Cysteine and tyrosine-rich protein 1 [PF10873.10, score=21.4]} {RNA1509_18073, RNA1509_25726, RNA1509_52666} {RNA1310_31503.1, RNA1509_18073, RNA1509_25726, RNA1509_52666} {RNA1509_18073, RNA1509_25726, RNA1509_52666, RNA815_16246.1}
11. MligTC455_11607 191 3.98 Mlig455_001162

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.741

 2.554 - 0.823 - 0.751 0.980 - Mlig455_001162 {REF} {Length: 844} {TRANSSPLICED} {RNA1509_27526} {RNA1310_21583} {RNA815_12355}
12. MligTC455_11606 208 4.32 Mlig455_001163

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.255

 2.5 - 0.806 - 0.722 0.972 - Mlig455_001163 {REF} {Length: 3123} {TRANSSPLICED} {Pfam: Cysteine and tyrosine-rich protein 1 [PF10873.10, score=23.7]} {RNA1509_18810, RNA1509_34925, RNA1509_36309} {RNA1310_7682.1, RNA1509_34925, RNA1509_36309} {RNA1509_34925, RNA1509_36309, RNA815_11219}
13. MligTC455_53960 381 7.93 Mlig455_039523

Neo: -

Age: logFC(26M/2M)=-0.527

Region-enriched R2: 1.863/0.02753

 TTLL7 2.476 - - 0.954 0.808 0.714 - Mlig455_039523 {REF} {Length: 2811} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=44.5]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=146, Expect=5e-37]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=261, Expect=2e-76]} {Dmel: FBgn0039501, CG5987, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=118, Expect=1e-27]} {RNA1509_8901} {RNA1310_4651} {RNA815_1757}
14. MligTC455_44624 5094 106.13 Mlig455_057087

Neo: -

Age: logFC(26M/2M)=-0.347

 C1orf158 2.464 - - - 0.951 0.770 0.743 Mlig455_057087 {REF} {Length: 1117} {Human: ENSG00000157330, C1orf158, chromosome 1 open reading frame 158, [RH, Score=92.0, Expect=8e-23]} {Mouse: ENSMUSG00000028589, 1700012P22Rik, RIKEN cDNA 1700012P22 gene, [RH, Score=92.4, Expect=5e-23]} {Smed: dd_Smed_v6_6127_0_1, dd_Smed_v6_6127_0_1, [RH, Score=141, Expect=1e-42]} {RNA1509_23671, RNA1509_5886} {RNA1310_35499.1, RNA1509_23671, RNA1509_5886} {RNA1509_23671, RNA1509_5886, RNA815_44.1}
15. MligTC455_39514 18318 381.63 Mlig455_031387

Neo: -

Age: Down-Up-Up

 CAV3 1.801 - - 0.831 - - 0.970 Mlig455_031387 {REF} {Length: 1631} {Pfam: Caveolin [PF01146.19, score=122.7]} {Human: ENSG00000182533, CAV3, caveolin 3, [Score=95.1, Expect=2e-25]} {Mouse: ENSMUSG00000000058, Cav2, caveolin 2, [RH, Score=93.6, Expect=9e-25]} {Celegans: WBGene00000302, cav-2, Caveolin-2, [Score=70.1, Expect=5e-16]} {Smed: dd_Smed_v6_877_0_1, dd_Smed_v6_877_0_1, [RH, Score=127, Expect=1e-38]} {RNA1509_19265, RNA1509_30298, RNA1509_5172, RNA1509_822} {RNA1310_41931, RNA1509_19265, RNA1509_30298, RNA1509_5172, RNA1509_822} {RNA1509_19265, RNA1509_30298, RNA1509_5172, RNA1509_822, RNA815_18937}
16. MligTC455_44389 1039 21.65 Mlig455_060258

Neo: -

Age: -

 ZNF609 1.77 - 0.816 - - 0.954 - Mlig455_060258 {REF} {Length: 3936} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13912.8, score=19.4]} {Human: ENSG00000180357, ZNF609, zinc finger protein 609, [RH, Score=119, Expect=6e-27]} {Mouse: ENSMUSG00000040524, Zfp609, zinc finger protein 609, [RH, Score=115, Expect=9e-26]; ENSMUSG00000052713, Zfp608, zinc finger protein 608, [RH, Score=110, Expect=5e-24]} {Dmel: FBgn0285917, sbb, scribbler, [RH, Score=111, Expect=1e-24]} {Smed: dd_Smed_v6_9549_0_1, dd_Smed_v6_9549_0_1, [RH, Score=123, Expect=2e-30]} {RNA1509_5231, RNA1509_55248, RNA1509_58774} {RNA1310_1838, RNA1509_5231, RNA1509_55248, RNA1509_58774} {RNA1509_5231, RNA1509_55248, RNA1509_58774, RNA815_2102}
17. MligTC455_44144 1917 39.94 Mlig455_013403

Neo: -

Age: logFC(26M/2M)=-0.387

 TNKS 1.739 - - 0.955 - 0.784 - Mlig455_013403 {REF} {Length: 3109} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=73.2]; Ankyrin repeats (many copies) [PF13857.8, score=57.0]; Ankyrin repeats (many copies) [PF13637.8, score=54.5]; Ion transport protein [PF00520.33, score=51.4]; Ankyrin repeat [PF00023.32, score=50.9]; Ankyrin repeat [PF13606.8, score=46.3]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=88.6, Expect=3e-17]; ENSG00000285372, AC270292.3, tankyrase, [Score=87.4, Expect=7e-17]; ENSG00000107854, TNKS2, tankyrase 2, [Score=84.3, Expect=6e-16]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=87.4, Expect=4e-17]; ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [Score=84.0, Expect=5e-16]} {Dmel: FBgn0004647, N, Notch, [Score=80.1, Expect=7e-15]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=82.8, Expect=6e-16]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=79.3, Expect=6e-15]} {RNA1509_2994} {RNA1310_1688.1, RNA1509_2994} {RNA1509_2994, RNA815_1415.1}
18. MligTC455_25370 2478 51.63 Mlig455_036924

Neo: -

Age: logFC(26M/2M)=0.690

 RNF213 1.692 - - - 0.740 0.952 - Mlig455_036924 {REF} {Length: 18454} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=27.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.6]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=987, Expect=0.0]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=1107, Expect=0.0]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=58.9, Expect=9e-08]} {RNA1509_25904, RNA1509_30023, RNA1509_326} {RNA1310_27.1, RNA1509_25904, RNA1509_30023} {RNA1509_25904, RNA1509_30023, RNA815_14}
19. MligTC455_17383 1327 27.64 Mlig455_022114, Mlig455_053650

Neo: -

Age: -

 1.688 - 0.738 0.950 - - -

Mlig455_022114 {REF} {Length: 3990} {Pfam: Domain of Unknown Function (DUF1542) [PF07564.13, score=21.5]} {RNA1509_4411} {RNA1310_4537.1, RNA1509_4411} {RNA1509_4411, RNA815_1371}

Mlig455_053650 {REF} {Length: 4005} {Pfam: Domain of Unknown Function (DUF1542) [PF07564.13, score=21.5]} {RNA1509_4411, RNA1509_52435} {RNA1310_4537.1, RNA1509_52435} {RNA1509_52435, RNA815_1371}
20. MligTC455_48124 3676 76.59 Mlig455_051417, Mlig455_051432

Neo: -

Age: Down-Up-Up

 1.687 - - 0.961 - - 0.726

Mlig455_051417 {REF} {Length: 3031} {Smed: dd_Smed_v6_7960_0_1, dd_Smed_v6_7960_0_1, [RH, Score=95.1, Expect=7e-25]} {RNA1509_46977} {RNA1310_32988} {RNA815_14341}

Mlig455_051432 {REF} {Length: 2527} {Smed: dd_Smed_v6_7960_0_1, dd_Smed_v6_7960_0_1, [RH, Score=95.1, Expect=7e-25]} {RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629} {RNA1310_32988, RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629} {RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629, RNA815_14341}
21. MligTC455_48123 1826 38.05 Mlig455_039614

Neo: -

Age: -

 1.683 - - 0.958 - - 0.725 Mlig455_039614 {REF} {Length: 4721} {Smed: dd_Smed_v6_7960_0_1, dd_Smed_v6_7960_0_1, [RH, Score=94.4, Expect=1e-24]} {RNA1509_46977} {RNA1310_32988} {RNA815_14341}
22. MligTC455_37381 849 17.7 Mlig455_023394

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.979

 1.681 - - - 0.727 0.954 - Mlig455_023394 {REF} {Length: 1607} {Pfam: Cytochrome P450 [PF00067.24, score=23.4]} {RNA1509_34868} {RNA1310_14317} {RNA815_5514}
23. MligTC455_47440 202 4.21 Mlig455_045850

Neo: -

Age: Up-Down-Up

 1.676 - 0.726 0.950 - - - Mlig455_045850 {REF} {Length: 2995} {TRANSSPLICED} {Smed: dd_Smed_v6_11834_0_1, dd_Smed_v6_11834_0_1, [RH, Score=170, Expect=5e-46]} {RNA1509_4754} {RNA1310_5693.1} {RNA815_2001}
24. MligTC455_48704 743 15.47 Mlig455_022999

Neo: -

Age: -

 CALU 0.963 - - 0.963 - - - Mlig455_022999 {REF} {Length: 1703} {Pfam: EF hand [PF00036.34, score=76.1]; EF-hand domain pair [PF13499.8, score=68.2]; EF hand [PF13202.8, score=66.2]; EF-hand domain [PF13405.8, score=58.2]; EF-hand domain pair [PF13833.8, score=42.4]; Dockerin type I domain [PF00404.20, score=22.5]} {Human: ENSG00000128595, CALU, calumenin, [Score=81.3, Expect=1e-16]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [Score=82.4, Expect=4e-17]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=86.3, Expect=2e-19]} {Celegans: WBGene00017240, calu-2, CALUmenin (Calcium-binding protein) homolog, [Score=60.8, Expect=3e-10]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=84.0, Expect=4e-18]} {RNA1509_23307, RNA1509_4643, RNA1509_9442} {RNA1310_23219, RNA1509_23307, RNA1509_9442} {RNA1509_23307, RNA1509_9442, RNA815_9251.1}
25. MligTC455_48705 4066 84.71 Mlig455_023100, Mlig455_027772

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.474

 CALU 0.962 - - 0.962 - - -

Mlig455_023100 {REF} {Length: 1754} {Pfam: EF hand [PF00036.34, score=76.2]; EF-hand domain pair [PF13499.8, score=70.4]; EF hand [PF13202.8, score=64.9]; EF-hand domain [PF13405.8, score=58.3]; EF-hand domain pair [PF13833.8, score=43.0]; Dockerin type I domain [PF00404.20, score=22.2]} {Human: ENSG00000128595, CALU, calumenin, [Score=80.9, Expect=2e-16]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [Score=82.0, Expect=5e-17]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=87.8, Expect=4e-20]} {Celegans: WBGene00017240, calu-2, CALUmenin (Calcium-binding protein) homolog, [Score=58.2, Expect=2e-09]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=87.0, Expect=4e-19]} {RNA1509_13383, RNA1509_37646, RNA1509_46506} {RNA1310_23219, RNA1509_13383, RNA1509_37646, RNA1509_46506} {RNA1509_13383, RNA1509_37646, RNA1509_46506, RNA815_9251.1}

Mlig455_027772 {REF} {Length: 1491} {Pfam: EF hand [PF00036.34, score=64.8]; EF hand [PF13202.8, score=56.0]; EF-hand domain pair [PF13499.8, score=54.8]; EF-hand domain [PF13405.8, score=46.3]; EF-hand domain pair [PF13833.8, score=36.5]} {Human: ENSG00000128595, CALU, calumenin, [Score=67.4, Expect=5e-12]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [Score=68.9, Expect=1e-12]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=65.5, Expect=2e-12]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=67.0, Expect=2e-12]} {RNA1509_14221} {RNA1310_23219} {RNA815_9251.1}
26. MligTC455_30000 1520 31.66 Mlig455_006409

Neo: -

Age: Down-Down-Up

 NOTCH1 0.957 - - 0.957 - - - Mlig455_006409 {REF} {Length: 2677} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=198.7]; Human growth factor-like EGF [PF12661.9, score=99.3]; EGF-like domain [PF07974.15, score=23.3]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=306, Expect=2e-87]; ENSG00000134250, NOTCH2, notch 2, [Score=305, Expect=5e-87]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=312, Expect=1e-89]; ENSMUSG00000027878, Notch2, notch 2, [Score=300, Expect=9e-86]} {Dmel: FBgn0259685, crb, crumbs, [Score=291, Expect=1e-82]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=234, Expect=5e-64]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=236, Expect=9e-65]} {RNA1509_26892} {RNA1310_37026} {RNA815_11987.1}
27. MligTC455_15421 158 3.29 Mlig455_018040

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_018040 {REF} {Length: 1037} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=60.1]} {RNA1509_34494} {RNA1310_23320} {RNA815_36104}
28. MligTC455_44070 1172 24.41 Mlig455_013674, Mlig455_013682, Mlig455_013691

Neo: -

Age: logFC(26M/2M)=-0.325

 CASKIN1 0.952 - - 0.952 - - -

Mlig455_013674 {REF} {Length: 3260} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=71.4]; SAM domain (Sterile alpha motif) [PF07647.19, score=60.8]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=111, Expect=1e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=109, Expect=6e-24]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=103, Expect=3e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=90.5, Expect=1e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=142, Expect=4e-35]} {RNA1509_15754} {RNA1310_14106} {RNA815_1106}

Mlig455_013682 {REF} {Length: 4028} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=70.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=59.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=111, Expect=4e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=108, Expect=2e-23]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=102, Expect=6e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=153, Expect=3e-38]} {RNA1509_15754} {RNA1310_14106} {RNA815_1106}

Mlig455_013691 {REF} {Length: 4523} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=70.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=59.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=109, Expect=9e-24]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=102, Expect=8e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=90.1, Expect=2e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=146, Expect=6e-36]} {RNA1509_15754, RNA1509_52244} {RNA1310_14106, RNA1509_52244} {RNA1509_52244, RNA815_1106}
29. MligTC455_51575 571 11.89 Mlig455_022958

Neo: -

Age: Up-Down-Down

 CCDC57 0.952 - - - - 0.952 - Mlig455_022958 {REF} {Length: 3808} {Human: ENSG00000176155, CCDC57, coiled-coil domain containing 57, [RH, Score=111, Expect=2e-24]} {Smed: dd_Smed_v6_10967_0_1, dd_Smed_v6_10967_0_1, [RH, Score=201, Expect=1e-53]} {RNA1509_12720, RNA1509_57308, RNA1509_57386, RNA1509_9404} {RNA1310_3169, RNA1509_12720, RNA1509_57308, RNA1509_57386, RNA1509_9404} {RNA1509_12720, RNA1509_57308, RNA1509_57386, RNA1509_9404, RNA815_2625}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA