Data search
Results for MligTC455_52768
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52768 | 693 | 14.44 | Mlig455_004978 | Neo: - Age: - |
Mlig455_004978 {REF} {Length: 1158} {TRANSSPLICED} {RNA1509_54814} {RNA1310_30336.1} {RNA815_6347.1} |
Cumulative graph for MligTC455_52768
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.855 | 4.108 | 0.41409 | 1.00000 | |
| RegionR2 | 0.207 | 4.108 | 0.63086 | 0.97182 | |
| RegionR3 | -0.352 | 4.108 | 0.35889 | 0.89431 | |
| RegionR4 | -0.14 | 4.108 | 0.73437 | 1.00000 | |
| RegionR5 | 0.358 | 4.108 | 0.28386 | 0.61312 | |
| RegionR6 | 0.342 | 4.108 | 0.35082 | 0.93573 | |
| RegionR7 | 0.19 | 4.108 | 0.68406 | 1.00000 | |
| RegionR8 | 0.251 | 4.108 | 0.67508 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.199 | 4.108 | 0.08179 | 0.77912 | |
| RegenerationR2 | -0.303 | 4.108 | 0.39959 | 0.81434 | |
| RegenerationR3 | -0.172 | 4.108 | 0.67976 | 0.94017 | |
| RegenerationR4 | -0.395 | 4.108 | 0.32855 | 0.76384 | |
| RegenerationR5 | -0.382 | 4.108 | 0.29429 | 0.72212 | |
| RegenerationR6 | -0.809 | 4.108 | 0.05127 | 0.28378 | |
| RegenerationBL | -0.677 | 4.108 | 0.16681 | 0.48948 | |
| RegenerationTP | 0.3 | 4.108 | 0.53322 | 0.92280 |
Genes with expression patterns similar to MligTC455_52768
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52768 | 693 | 14.44 | Mlig455_004978 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004978 {REF} {Length: 1158} {TRANSSPLICED} {RNA1509_54814} {RNA1310_30336.1} {RNA815_6347.1} | |
| 2. | MligTC455_24945 | 1253 | 26.09 | Mlig455_045575 | Neo: Irradiation |
ABCA1 | 1.788 | - | - | 0.837 | 0.951 | - | - | Mlig455_045575 {REF} {Length: 9233} {Pfam: ABC transporter [PF00005.29, score=176.2]; ABC-2 family transporter protein [PF12698.9, score=120.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=70.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=34.2]; AAA domain [PF13476.8, score=25.5]; AAA ATPase domain [PF13175.8, score=20.8]; RsgA GTPase [PF03193.18, score=20.5]; P-loop containing region of AAA domain [PF13555.8, score=20.1]; 50S ribosome-binding GTPase [PF01926.25, score=18.7]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [Score=646, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [Score=643, Expect=0.0]} {Dmel: FBgn0036747, CG6052, [Score=275, Expect=6e-74]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=272, Expect=6e-73]} {Smed: dd_Smed_v6_2300_0_1, dd_Smed_v6_2300_0_1, [Score=639, Expect=0.0]} {RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172} {RNA1310_344, RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172} {RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172, RNA815_636} |
| 3. | MligTC455_25479 | 507 | 10.56 | Mlig455_002918 | Neo: - Age: - |
ITK | 0.959 | - | - | - | - | - | 0.959 | Mlig455_002918 {REF} {Length: 4643} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=267.9]; Protein kinase domain [PF00069.27, score=133.8]; SH2 domain [PF00017.26, score=77.3]; PH domain [PF00169.31, score=32.0]; BTK motif [PF00779.21, score=29.7]; Variant SH3 domain [PF14604.8, score=28.5]; SH3 domain [PF00018.30, score=27.5]; SH3 domain [PF17902.3, score=18.6]} {Human: ENSG00000113263, ITK, IL2 inducible T cell kinase, [RH, Score=434, Expect=9e-144]} {Mouse: ENSMUSG00000031264, Btk, Bruton agammaglobulinemia tyrosine kinase, [RH, Score=430, Expect=7e-142]; ENSMUSG00000020395, Itk, IL2 inducible T cell kinase, [RH, Score=421, Expect=7e-139]} {Dmel: FBgn0003502, Btk29A, Btk family kinase at 29A, [RH, Score=452, Expect=6e-149]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=294, Expect=7e-92]} {Smed: dd_Smed_v6_4818_0_1, dd_Smed_v6_4818_0_1, [RH, Score=643, Expect=0.0]} {RNA1509_14892} {RNA1310_2046} {RNA815_1375.1} |
| 4. | MligTC455_30439 | 1099 | 22.9 | Mlig455_028552 | Neo: - |
UPP1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_028552 {REF} {Length: 5179} {Pfam: Phosphorylase superfamily [PF01048.22, score=98.6]} {Human: ENSG00000183696, UPP1, uridine phosphorylase 1, [RH, Score=266, Expect=4e-88]; ENSG00000007001, UPP2, uridine phosphorylase 2, [RH, Score=261, Expect=4e-86]} {Mouse: ENSMUSG00000020407, Upp1, uridine phosphorylase 1, [RH, Score=271, Expect=3e-90]; ENSMUSG00000026839, Upp2, uridine phosphorylase 2, [RH, Score=263, Expect=6e-87]} {Dmel: FBgn0039464, CG6330, [RH, Score=263, Expect=2e-86]} {Celegans: WBGene00022817, upp-1, Uridine and thymidine phosphorylase, [RH, Score=203, Expect=6e-64]} {Smed: dd_Smed_v6_9107_0_1, dd_Smed_v6_9107_0_1, [RH, Score=200, Expect=7e-63]} {RNA1509_11239, RNA1509_11745} {RNA1310_7741.2, RNA1509_11239, RNA1509_11745} {RNA1509_11239, RNA1509_11745, RNA815_2064.1} |
| 5. | MligTC455_31313 | 381 | 7.94 | Mlig455_001901 | Neo: - Age: - |
ARGLU1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_001901 {REF} {Length: 2328} {TRANSSPLICED} {Pfam: Arginine and glutamate-rich 1 [PF15346.8, score=111.3]} {Human: ENSG00000134884, ARGLU1, arginine and glutamate rich 1, [RH, Score=79.0, Expect=1e-16]} {Mouse: ENSMUSG00000040459, Arglu1, arginine and glutamate rich 1, [RH, Score=79.3, Expect=9e-17]} {Dmel: FBgn0051712, CG31712, [RH, Score=83.2, Expect=3e-18]} {Smed: dd_Smed_v6_6381_0_1, dd_Smed_v6_6381_0_1, [RH, Score=63.9, Expect=5e-12]} {RNA1509_30130} {RNA1310_34850} {RNA815_5433.1} |
Berezikov Lab - 2020-2021 © ERIBA