Data search
Results for MligTC455_24945
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24945 | 1253 | 26.09 | Mlig455_045575 | Neo: Irradiation |
ABCA1 | Mlig455_045575 {REF} {Length: 9233} {Pfam: ABC transporter [PF00005.29, score=176.2]; ABC-2 family transporter protein [PF12698.9, score=120.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=70.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=34.2]; AAA domain [PF13476.8, score=25.5]; AAA ATPase domain [PF13175.8, score=20.8]; RsgA GTPase [PF03193.18, score=20.5]; P-loop containing region of AAA domain [PF13555.8, score=20.1]; 50S ribosome-binding GTPase [PF01926.25, score=18.7]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [Score=646, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [Score=643, Expect=0.0]} {Dmel: FBgn0036747, CG6052, [Score=275, Expect=6e-74]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=272, Expect=6e-73]} {Smed: dd_Smed_v6_2300_0_1, dd_Smed_v6_2300_0_1, [Score=639, Expect=0.0]} {RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172} {RNA1310_344, RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172} {RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172, RNA815_636} |
Cumulative graph for MligTC455_24945
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.339 | 4.923 | 0.66945 | 1.00000 | |
| RegionR2 | 0.517 | 4.923 | 0.18781 | 0.54211 | |
| RegionR3 | -0.113 | 4.923 | 0.73505 | 1.00000 | |
| RegionR4 | 0.764 | 4.923 | 0.04003 | 0.16562 | |
| RegionR5 | -1.863 | 4.923 | 0.00000 | 0.00001 | |
| RegionR6 | -0.353 | 4.923 | 0.29866 | 0.89027 | |
| RegionR7 | 0.952 | 4.923 | 0.00577 | 0.12088 | |
| RegionR8 | 0.435 | 4.923 | 0.32467 | 0.95723 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.703 | 4.923 | 0.02981 | 0.62704 | |
| RegenerationR2 | 0.374 | 4.923 | 0.28857 | 0.73137 | |
| RegenerationR3 | 0.634 | 4.923 | 0.11067 | 0.52385 | |
| RegenerationR4 | -1.304 | 4.923 | 0.00167 | 0.04989 | |
| RegenerationR5 | 0.441 | 4.923 | 0.29900 | 0.72617 | |
| RegenerationR6 | 0.047 | 4.923 | 0.91096 | 1.00000 | |
| RegenerationBL | -0.444 | 4.923 | 0.31079 | 0.67622 | |
| RegenerationTP | -0.269 | 4.923 | 0.52931 | 0.91982 |
Genes with expression patterns similar to MligTC455_24945
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24945 | 1253 | 26.09 | Mlig455_045575 | Neo: Irradiation |
ABCA1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045575 {REF} {Length: 9233} {Pfam: ABC transporter [PF00005.29, score=176.2]; ABC-2 family transporter protein [PF12698.9, score=120.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=70.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=34.2]; AAA domain [PF13476.8, score=25.5]; AAA ATPase domain [PF13175.8, score=20.8]; RsgA GTPase [PF03193.18, score=20.5]; P-loop containing region of AAA domain [PF13555.8, score=20.1]; 50S ribosome-binding GTPase [PF01926.25, score=18.7]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [Score=646, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [Score=643, Expect=0.0]} {Dmel: FBgn0036747, CG6052, [Score=275, Expect=6e-74]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=272, Expect=6e-73]} {Smed: dd_Smed_v6_2300_0_1, dd_Smed_v6_2300_0_1, [Score=639, Expect=0.0]} {RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172} {RNA1310_344, RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172} {RNA1509_16622, RNA1509_22292, RNA1509_2233, RNA1509_58172, RNA815_636} |
| 2. | MligTC455_45062 | 1063 | 22.15 | Mlig455_044267 | Neo: - Age: - |
2.698 | - | - | - | 0.953 | 0.834 | 0.911 | Mlig455_044267 {REF} {Length: 1936} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=31.9]} {Smed: dd_Smed_v6_2982_0_2, dd_Smed_v6_2982_0_2, [Score=72.0, Expect=1e-14]} {RNA1509_23162, RNA1509_50902} {RNA1310_19283, RNA1509_23162, RNA1509_50902} {RNA1509_23162, RNA1509_50902, RNA815_7600.1} | |
| 3. | MligTC455_49143 | 772 | 16.08 | Mlig455_021704 | Neo: - Age: - Region-enriched R2: 1.427/0.03420 |
2.443 | - | - | 0.711 | 0.961 | 0.771 | - | Mlig455_021704 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4537) [PF15057.8, score=48.8]} {Smed: dd_Smed_v6_13233_0_2, dd_Smed_v6_13233_0_2, [Score=60.1, Expect=4e-09]} {RNA1509_11962} {RNA1310_8951.1, RNA1509_11962} | |
| 4. | MligTC455_52768 | 693 | 14.44 | Mlig455_004978 | Neo: - Age: - |
1.788 | - | - | 0.837 | 0.951 | - | - | Mlig455_004978 {REF} {Length: 1158} {TRANSSPLICED} {RNA1509_54814} {RNA1310_30336.1} {RNA815_6347.1} | |
| 5. | MligTC455_41059 | 909 | 18.94 | Mlig455_066680 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.413 Region-enriched R2: 2.304/0.00054 |
1.743 | - | - | - | 0.956 | 0.787 | - | Mlig455_066680 {REF} {Length: 7899} {TRANSSPLICED} {Pfam: DB module [PF01682.21, score=77.4]; Fibronectin type III domain [PF00041.23, score=61.6]; Immunoglobulin domain [PF13927.8, score=48.4]; Immunoglobulin domain [PF13895.8, score=45.9]; Immunoglobulin I-set domain [PF07679.18, score=35.4]; Immunoglobulin domain [PF00047.27, score=27.0]} {Dmel: FBgn0036454, CG17839, [Score=50.4, Expect=1e-05]} {Celegans: WBGene00011418, igdb-1, Ig-like and fibronectin type-III domain-containing protein 1, [Score=50.1, Expect=1e-05]} {RNA1509_1506} {RNA1310_657} {RNA815_714} | |
| 6. | MligTC455_17057 | 399 | 8.31 | Mlig455_052073 | Neo: - Age: - Region-enriched R2: 3.347/0.00011 |
CCDC153 | 1.718 | - | - | - | - | 0.951 | 0.767 | Mlig455_052073 {REF} {Length: 1504} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain [PF16454.7, score=20.6]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=18.8]} {Human: ENSG00000248712, CCDC153, coiled-coil domain containing 153, [RH, Score=51.6, Expect=1e-07]} {Mouse: ENSMUSG00000070306, Ccdc153, coiled-coil domain containing 153, [RH, Score=67.4, Expect=1e-13]} {Smed: dd_Smed_v6_6974_0_1, dd_Smed_v6_6974_0_1, [RH, Score=89.7, Expect=2e-22]} {RNA1509_20719, RNA1509_24357} {RNA1310_27583.2, RNA1509_20719, RNA1509_24357} {RNA1509_20719, RNA1509_24357, RNA815_17925} |
| 7. | MligTC455_24519 | 1035 | 21.55 | Mlig455_026505 | Neo: - Age: Up-Down-Down Region-enriched R2: 1.364/0.03756 |
DNAH10 | 1.694 | - | - | - | 0.955 | 0.739 | - | Mlig455_026505 {REF} {Length: 14733} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=390.5]; P-loop containing dynein motor region D4 [PF12780.9, score=341.0]; Dynein heavy chain C-terminal domain [PF18199.3, score=306.8]; ATP-binding dynein motor region [PF12781.9, score=282.5]; P-loop containing dynein motor region [PF12775.9, score=264.2]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.4]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=142.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=92.9]; Dynein heavy chain AAA lid domain [PF17852.3, score=81.8]; AAA+ lid domain [PF17857.3, score=63.2]; AAA domain [PF13401.8, score=44.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=34.7]; AAA ATPase domain [PF13191.8, score=31.6]; AAA domain [PF13238.8, score=24.7]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=21.4]; Sigma-54 interaction domain [PF00158.28, score=21.3]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [RH, Score=4662, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [Score=4676, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3860, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1408, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [RH, Score=4698, Expect=0.0]} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1310_40.1, RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395, RNA815_20} |
| 8. | MligTC455_30439 | 1099 | 22.9 | Mlig455_028552 | Neo: - |
UPP1 | 1.673 | - | - | 0.711 | 0.962 | - | - | Mlig455_028552 {REF} {Length: 5179} {Pfam: Phosphorylase superfamily [PF01048.22, score=98.6]} {Human: ENSG00000183696, UPP1, uridine phosphorylase 1, [RH, Score=266, Expect=4e-88]; ENSG00000007001, UPP2, uridine phosphorylase 2, [RH, Score=261, Expect=4e-86]} {Mouse: ENSMUSG00000020407, Upp1, uridine phosphorylase 1, [RH, Score=271, Expect=3e-90]; ENSMUSG00000026839, Upp2, uridine phosphorylase 2, [RH, Score=263, Expect=6e-87]} {Dmel: FBgn0039464, CG6330, [RH, Score=263, Expect=2e-86]} {Celegans: WBGene00022817, upp-1, Uridine and thymidine phosphorylase, [RH, Score=203, Expect=6e-64]} {Smed: dd_Smed_v6_9107_0_1, dd_Smed_v6_9107_0_1, [RH, Score=200, Expect=7e-63]} {RNA1509_11239, RNA1509_11745} {RNA1310_7741.2, RNA1509_11239, RNA1509_11745} {RNA1509_11239, RNA1509_11745, RNA815_2064.1} |
| 9. | MligTC455_20723 | 1908 | 39.76 | Mlig455_026557 | Neo: - Age: - |
CCDC62 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_026557 {REF} {Length: 2509} {Human: ENSG00000130783, CCDC62, coiled-coil domain containing 62, [RH, Score=117, Expect=7e-27]} {Mouse: ENSMUSG00000061882, Ccdc62, coiled-coil domain containing 62, [RH, Score=122, Expect=1e-28]} {RNA1509_39993} {RNA1310_6237.1} {RNA815_13573} |
| 10. | MligTC455_28142 | 254 | 5.3 | Mlig455_011323, Mlig455_026058 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_011323 {REF} {Length: 2835} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_24716.1} {RNA815_11419.1} Mlig455_026058 {REF} {Length: 2664} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_24716.1} {RNA815_11419.1} |
|
| 11. | MligTC455_15645 | 14723 | 306.72 | Mlig455_015733, Mlig455_049437 | Neo: - Age: Down-Down-Up Region-enriched R7: 1.492/0.00234 Regeneration-downregulated BL: -2.677 Regeneration-depleted BL: -2.677 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_015733 {REF} {Length: 960} {Pfam: SLBB domain [PF10531.11, score=20.2]} {RNA1509_3484} {RNA1310_43598.2} {RNA815_17382} Mlig455_049437 {REF} {Length: 994} {Pfam: YtkA-like [PF13115.8, score=24.2]} {RNA1509_3484} {RNA1310_43598.2} {RNA815_17382} |
|
| 12. | MligTC455_22567 | 154 | 3.2 | Mlig455_006662 | Neo: - Age: Down-Up-Down |
TRPM3 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_006662 {REF} {Length: 5900} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=101.6]; Ankyrin repeats (3 copies) [PF12796.9, score=83.4]; Ankyrin repeats (many copies) [PF13857.8, score=57.5]; Ankyrin repeat [PF00023.32, score=54.5]; Ankyrin repeat [PF13606.8, score=53.6]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=108, Expect=6e-23]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=107, Expect=9e-23]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=107, Expect=4e-23]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=60.5, Expect=1e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=118, Expect=1e-26]} {RNA1509_12598} {RNA1310_943.1, RNA1509_12598} {RNA1509_12598, RNA815_2516.1} |
| 13. | MligTC455_21183 | 113 | 2.35 | Mlig455_002162 | Neo: - Age: - Region-enriched R7: 2.794/0.01846 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_002162 {REF} {Length: 4174} {RNA1509_21579} {RNA1310_1867.1} {RNA815_13517} | |
| 14. | MligTC455_28156 | 802 | 16.71 | Mlig455_003147, Mlig455_032425, Mlig455_034911, Mlig455_035373, Mlig455_051607, Mlig455_054980, Mlig455_057443 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_003147 {REF} {Length: 967} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_39121} Mlig455_032425 {REF} {Length: 1839} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_2198.1} Mlig455_034911 {REF} {Length: 964} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_39121} Mlig455_035373 {REF} {Length: 283} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17062} {RNA815_22796.1} Mlig455_051607 {REF} {Length: 334} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.3} {RNA815_39121} Mlig455_054980 {REF} {Length: 345} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.3} {RNA815_39121} Mlig455_057443 {REF} {Length: 938} {NoTransDecoderORF} {RNA1509_20409} {RNA1310_17737.3} {RNA815_39121} |
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