Data search
Results for MligTC455_52896
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52896 | 904 | 18.83 | Mlig455_024424, Mlig455_024578 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.512/0.00012 Regeneration-upregulated BL: 3.867 Regeneration-enriched BL: 3.867 |
BARD1 | Mlig455_024424 {REF} {Length: 2471} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.3]; Ankyrin repeats (many copies) [PF13637.8, score=61.6]; Ankyrin repeat [PF00023.32, score=57.6]; Ankyrin repeats (many copies) [PF13857.8, score=49.5]; Ankyrin repeat [PF13606.8, score=48.4]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=36.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=33.5]; RING-type zinc-finger [PF13445.8, score=22.2]; Prokaryotic RING finger family 4 [PF14447.8, score=21.6]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=21.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.2]} {Human: ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [RH, Score=214, Expect=2e-59]} {Mouse: ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [RH, Score=213, Expect=2e-59]} {Dmel: FBgn0036814, CG14073, [RH, Score=88.6, Expect=9e-18]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=71.6, Expect=6e-13]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=103, Expect=8e-23]} {RNA1509_6999} {RNA1310_8348} {RNA815_2740} Mlig455_024578 {REF} {Length: 2553} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.2]; Ankyrin repeats (many copies) [PF13637.8, score=61.3]; Ankyrin repeat [PF00023.32, score=57.4]; Ankyrin repeat [PF13606.8, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=46.6]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=39.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=32.2]; RING-type zinc-finger [PF13445.8, score=22.1]; Prokaryotic RING finger family 4 [PF14447.8, score=21.5]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=21.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.2]} {Human: ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [RH, Score=218, Expect=2e-60]} {Mouse: ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [RH, Score=217, Expect=2e-60]} {Dmel: FBgn0036814, CG14073, [RH, Score=89.0, Expect=8e-18]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=71.6, Expect=6e-13]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=103, Expect=7e-23]} {RNA1509_6999} {RNA1310_8348, RNA1509_6999} {RNA1509_6999, RNA815_2740} |
Cumulative graph for MligTC455_52896
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.05 | 4.528 | 0.99861 | 1.00000 | |
| RegionR2 | 1.292 | 4.528 | 0.11837 | 0.42618 | |
| RegionR3 | 0.577 | 4.528 | 0.42975 | 0.95026 | |
| RegionR4 | 1.653 | 4.528 | 0.01902 | 0.09844 | |
| RegionR5 | 2.512 | 4.528 | 0.00000 | 0.00012 | |
| RegionR6 | 1.267 | 4.528 | 0.07270 | 0.50154 | |
| RegionR7 | 1.602 | 4.528 | 0.03531 | 0.35780 | |
| RegionR8 | -6.853 | 4.528 | 0.00432 | 0.11497 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.589 | 4.528 | 0.50064 | 1.00000 | |
| RegenerationR2 | -0.173 | 4.528 | 0.74774 | 0.97257 | |
| RegenerationR3 | 1.235 | 4.528 | 0.03678 | 0.33926 | |
| RegenerationR4 | 0.565 | 4.528 | 0.32081 | 0.75920 | |
| RegenerationR5 | 0.557 | 4.528 | 0.25972 | 0.69138 | |
| RegenerationR6 | 1.83 | 4.528 | 0.00107 | 0.03594 | |
| RegenerationBL | 3.867 | 4.528 | 0.00001 | 0.00083 | Specific for BL: 3.867 |
| RegenerationTP | 3.424 | 4.528 | 0.02406 | 0.26322 |
Genes with expression patterns similar to MligTC455_52896
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52896 | 904 | 18.83 | Mlig455_024424, Mlig455_024578 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.512/0.00012 Regeneration-upregulated BL: 3.867 Regeneration-enriched BL: 3.867 |
BARD1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024424 {REF} {Length: 2471} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.3]; Ankyrin repeats (many copies) [PF13637.8, score=61.6]; Ankyrin repeat [PF00023.32, score=57.6]; Ankyrin repeats (many copies) [PF13857.8, score=49.5]; Ankyrin repeat [PF13606.8, score=48.4]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=36.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=33.5]; RING-type zinc-finger [PF13445.8, score=22.2]; Prokaryotic RING finger family 4 [PF14447.8, score=21.6]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=21.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.2]} {Human: ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [RH, Score=214, Expect=2e-59]} {Mouse: ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [RH, Score=213, Expect=2e-59]} {Dmel: FBgn0036814, CG14073, [RH, Score=88.6, Expect=9e-18]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=71.6, Expect=6e-13]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=103, Expect=8e-23]} {RNA1509_6999} {RNA1310_8348} {RNA815_2740} Mlig455_024578 {REF} {Length: 2553} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.2]; Ankyrin repeats (many copies) [PF13637.8, score=61.3]; Ankyrin repeat [PF00023.32, score=57.4]; Ankyrin repeat [PF13606.8, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=46.6]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=39.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=32.2]; RING-type zinc-finger [PF13445.8, score=22.1]; Prokaryotic RING finger family 4 [PF14447.8, score=21.5]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=21.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.2]} {Human: ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [RH, Score=218, Expect=2e-60]} {Mouse: ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [RH, Score=217, Expect=2e-60]} {Dmel: FBgn0036814, CG14073, [RH, Score=89.0, Expect=8e-18]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=71.6, Expect=6e-13]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=103, Expect=7e-23]} {RNA1509_6999} {RNA1310_8348, RNA1509_6999} {RNA1509_6999, RNA815_2740} |
| 2. | MligTC455_47882 | 920 | 19.18 | Mlig455_014428 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.468/0.00366 |
2.621 | - | 0.743 | - | 0.962 | 0.916 | - | Mlig455_014428 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_12311} {RNA1310_13342} {RNA815_9722.1} | |
| 3. | MligTC455_50563 | 450 | 9.38 | Mlig455_055321 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.494 Region-enriched R5: 1.663/0.00868 |
CERS2 | 1.819 | - | - | - | 0.867 | 0.952 | - | Mlig455_055321 {REF} {Length: 2478} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=138.6]} {Human: ENSG00000143418, CERS2, ceramide synthase 2, [Score=230, Expect=5e-72]} {Mouse: ENSMUSG00000015714, Cers2, ceramide synthase 2, [Score=233, Expect=3e-73]} {Dmel: FBgn0040918, schlank, [RH, Score=229, Expect=2e-71]} {Celegans: WBGene00002043, hyl-1, Ceramide synthase hyl-1, [Score=158, Expect=1e-45]} {Smed: dd_Smed_v6_4223_0_1, dd_Smed_v6_4223_0_1, [Score=231, Expect=7e-73]} {RNA1509_5457} {RNA1310_7363.1} {RNA815_2329.1} |
| 4. | MligTC455_41415 | 3303 | 68.81 | Mlig455_018644, Mlig455_018832 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.340/0.00000 |
ZCCHC9 | 1.773 | 0.795 | - | - | - | 0.978 | - | Mlig455_018644 {REF} {Length: 1852} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=58.7]; Zinc knuckle [PF13696.8, score=41.1]} {Human: ENSG00000131732, ZCCHC9, zinc finger CCHC-type containing 9, [RH, Score=143, Expect=7e-41]} {Mouse: ENSMUSG00000021621, Zcchc9, zinc finger, CCHC domain containing 9, [RH, Score=144, Expect=3e-41]} {Celegans: WBGene00017210, F07E5.5, [RH, Score=111, Expect=2e-28]} {Smed: dd_Smed_v6_7172_0_1, dd_Smed_v6_7172_0_1, [RH, Score=128, Expect=2e-36]} {RNA1509_15308, RNA1509_21839} {RNA1310_28047.1, RNA1509_15308} {RNA1509_15308, RNA815_12618} Mlig455_018832 {REF} {Length: 1231} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=58.7]; Zinc knuckle [PF13696.8, score=41.1]} {Human: ENSG00000131732, ZCCHC9, zinc finger CCHC-type containing 9, [RH, Score=139, Expect=2e-39]} {Mouse: ENSMUSG00000021621, Zcchc9, zinc finger, CCHC domain containing 9, [RH, Score=140, Expect=5e-40]} {Celegans: WBGene00017210, F07E5.5, [RH, Score=111, Expect=2e-28]} {Smed: dd_Smed_v6_7172_0_1, dd_Smed_v6_7172_0_1, [RH, Score=128, Expect=2e-36]} {RNA1509_21839} {RNA1310_28047.1, RNA1509_21839} {RNA1509_21839, RNA815_12618} |
| 5. | MligTC455_51555 | 739 | 15.39 | Mlig455_028099 | Neo: Irradiation Age: - |
1.745 | - | - | - | 0.795 | 0.950 | - | Mlig455_028099 {REF} {Length: 6184} {TRANSSPLICED} {RNA1509_5476} {RNA1310_1309} {RNA815_4828} | |
| 6. | MligTC455_26502 | 510 | 10.62 | Mlig455_049569 | Neo: - Age: - Region-enriched R5: 1.399/0.00231 |
NFX1 | 1.744 | 0.790 | - | - | 0.954 | - | - | Mlig455_049569 {REF} {Length: 3854} {TRANSSPLICED} {Pfam: NF-X1 type zinc finger [PF01422.19, score=40.6]; R3H domain [PF01424.24, score=21.6]} {Human: ENSG00000086102, NFX1, nuclear transcription factor, X-box binding 1, [RH, Score=545, Expect=1e-176]} {Mouse: ENSMUSG00000028423, Nfx1, nuclear transcription factor, X-box binding 1, [RH, Score=534, Expect=1e-172]} {Dmel: FBgn0001978, stc, shuttle craft, [RH, Score=473, Expect=2e-149]} {Celegans: WBGene00007048, nfx-1, Transcriptional repressor NF-X1 homolog, [RH, Score=468, Expect=1e-147]} {Smed: dd_Smed_v6_4795_0_1, dd_Smed_v6_4795_0_1, [RH, Score=408, Expect=1e-126]} {RNA1509_5938} {RNA1310_3865.1} {RNA815_4979} |
| 7. | MligTC455_14285 | 3014 | 62.79 | Mlig455_016582 | Neo: Int S/G2/M Age: - Regeneration-enriched R6: 1.855 |
NCL | 1.729 | - | - | - | 0.950 | 0.779 | - | Mlig455_016582 {REF} {Length: 3078} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=67.0]} {Human: ENSG00000115053, NCL, nucleolin, [RH, Score=97.4, Expect=3e-20]} {Mouse: ENSMUSG00000022858, Tra2b, transformer 2 beta, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_1760_0_2, dd_Smed_v6_1760_0_2, [Score=58.5, Expect=3e-09]} {RNA1509_1178, RNA1509_13202, RNA1509_14349, RNA1509_30637, RNA1509_9321} {RNA1310_13731, RNA1509_1178, RNA1509_13202, RNA1509_14349, RNA1509_30637, RNA1509_9321} {RNA1509_1178, RNA1509_13202, RNA1509_14349, RNA1509_30637, RNA1509_9321, RNA815_4445} |
| 8. | MligTC455_41592 | 1224 | 25.5 | Mlig455_017260 | Neo: Irradiation Age: - |
SPG7 | 1.683 | - | - | - | 0.952 | 0.731 | - | Mlig455_017260 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=133.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=131.5]; AAA+ lid domain [PF17862.3, score=44.3]; AAA ATPase domain [PF13191.8, score=26.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=23.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=19.3]; AAA domain [PF13401.8, score=18.8]} {Human: ENSG00000197912, SPG7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=450, Expect=3e-146]} {Mouse: ENSMUSG00000000738, Spg7, SPG7, paraplegin matrix AAA peptidase subunit, [Score=445, Expect=1e-145]} {Dmel: FBgn0024992, CG2658, [RH, Score=460, Expect=8e-150]} {Celegans: WBGene00021425, ppgn-1, ParaPleGiN AAA protease family; Paraplegin, [Score=425, Expect=2e-137]} {Smed: dd_Smed_v6_3475_0_1, dd_Smed_v6_3475_0_1, [RH, Score=443, Expect=1e-144]} {RNA1509_5475} {RNA1310_4379, RNA1509_5475} {RNA1509_5475, RNA815_3147} |
| 9. | MligTC455_19667 | 1945 | 40.52 | Mlig455_048916 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.226 |
METAP2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_048916 {REF} {Length: 1920} {TRANSSPLICED} {Pfam: Metallopeptidase family M24 [PF00557.26, score=151.8]} {Human: ENSG00000111142, METAP2, methionyl aminopeptidase 2, [RH, Score=580, Expect=0.0]} {Mouse: ENSMUSG00000036112, Metap2, methionine aminopeptidase 2, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0283478, und, uninitiated, [RH, Score=563, Expect=0.0]} {Celegans: WBGene00003130, map-2, Methionine AminoPeptidase, [RH, Score=553, Expect=0.0]} {Smed: dd_Smed_v6_2809_0_1, dd_Smed_v6_2809_0_1, [RH, Score=561, Expect=0.0]} {RNA1509_21855, RNA1509_3506, RNA1509_35350, RNA1509_44852, RNA1509_47551, RNA1509_5949, RNA1509_6431} {RNA1310_15348, RNA1509_21855, RNA1509_3506, RNA1509_35350, RNA1509_44852, RNA1509_47551, RNA1509_5949, RNA1509_6431} {RNA1509_21855, RNA1509_3506, RNA1509_35350, RNA1509_44852, RNA1509_47551, RNA1509_5949, RNA1509_6431, RNA815_5667} |
| 10. | MligTC455_23737 | 1020 | 21.26 | Mlig455_032622 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.580/0.00018 |
STARD7 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_032622 {REF} {Length: 1597} {Pfam: START domain [PF01852.21, score=59.0]} {Human: ENSG00000084090, STARD7, StAR related lipid transfer domain containing 7, [RH, Score=177, Expect=8e-52]} {Mouse: ENSMUSG00000027367, Stard7, START domain containing 7, [RH, Score=177, Expect=4e-52]} {Dmel: FBgn0032513, CG6565, [RH, Score=127, Expect=4e-33]} {Celegans: WBGene00007386, C06H2.2, [RH, Score=142, Expect=2e-39]} {Smed: dd_Smed_v6_4116_0_1, dd_Smed_v6_4116_0_1, [RH, Score=183, Expect=2e-54]} {RNA1509_29054, RNA1509_39330, RNA1509_56916} {RNA1310_19568.2, RNA1509_29054, RNA1509_39330, RNA1509_56916} {RNA1509_29054, RNA1509_39330, RNA1509_56916, RNA815_7887.1} |