Data search
Results for MligTC455_52930
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52930 | 639 | 13.32 | Mlig455_051859, Mlig455_053164 | Neo: - Age: Up-Down-Down |
Mlig455_051859 {REF} {Length: 246} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56431} {RNA1310_33398} {RNA815_15276} Mlig455_053164 {REF} {Length: 250} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56431} {RNA1310_33398} {RNA815_15276} |
Cumulative graph for MligTC455_52930
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.373 | 3.964 | 0.02168 | 0.40265 | |
| RegionR2 | 1.447 | 3.964 | 0.05999 | 0.29507 | |
| RegionR3 | 0.827 | 3.964 | 0.30183 | 0.84359 | |
| RegionR4 | 1.304 | 3.964 | 0.07618 | 0.25626 | |
| RegionR5 | 0.729 | 3.964 | 0.36103 | 0.71313 | |
| RegionR6 | 0.154 | 3.964 | 0.78493 | 1.00000 | |
| RegionR7 | 0.858 | 3.964 | 0.35002 | 0.98654 | |
| RegionR8 | 2.054 | 3.964 | 0.00642 | 0.14559 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.62 | 3.964 | 0.14859 | 0.88976 | |
| RegenerationR2 | 0.498 | 3.964 | 0.22642 | 0.67430 | |
| RegenerationR3 | 0.804 | 3.964 | 0.09057 | 0.48616 | |
| RegenerationR4 | 0.109 | 3.964 | 0.81731 | 0.99242 | |
| RegenerationR5 | 0.359 | 3.964 | 0.40498 | 0.80193 | |
| RegenerationR6 | 1.862 | 3.964 | 0.00015 | 0.01144 | |
| RegenerationBL | 0.9 | 3.964 | 0.07425 | 0.31820 | |
| RegenerationTP | -0.08 | 3.964 | 0.89104 | 1.00000 |
Genes with expression patterns similar to MligTC455_52930
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52930 | 639 | 13.32 | Mlig455_051859, Mlig455_053164 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051859 {REF} {Length: 246} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56431} {RNA1310_33398} {RNA815_15276} Mlig455_053164 {REF} {Length: 250} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56431} {RNA1310_33398} {RNA815_15276} |
|
| 2. | MligTC455_12083 | 578 | 12.05 | Mlig455_068507 | Neo: - Age: - |
AP3S1 | 1.727 | 0.755 | - | - | - | - | 0.972 | Mlig455_068507 {REF} {Length: 2541} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=181.4]} {Human: ENSG00000177879, AP3S1, adaptor related protein complex 3 subunit sigma 1, [RH, Score=302, Expect=8e-106]; ENSG00000157823, AP3S2, adaptor related protein complex 3 subunit sigma 2, [RH, Score=298, Expect=4e-104]} {Mouse: ENSMUSG00000024480, Ap3s1, adaptor-related protein complex 3, sigma 1 subunit, [RH, Score=302, Expect=5e-106]; ENSMUSG00000063801, Ap3s2, adaptor-related protein complex 3, sigma 2 subunit, [RH, Score=298, Expect=3e-104]} {Dmel: FBgn0003008, or, orange, [RH, Score=313, Expect=2e-110]} {Celegans: WBGene00000165, aps-3, AdaPtin, Small chain (Clathrin associated complex), [RH, Score=326, Expect=1e-115]} {Smed: dd_Smed_v6_4819_0_1, dd_Smed_v6_4819_0_1, [RH, Score=286, Expect=2e-99]} {RNA1509_31261, RNA1509_37250, RNA1509_51237} {RNA1310_9495, RNA1509_37250, RNA1509_51237} {RNA1509_37250, RNA1509_51237, RNA815_5870.1} |
| 3. | MligTC455_08466 | 882 | 18.38 | Mlig455_050890 | Neo: - Age: - |
XYLB | 1.702 | - | - | - | 0.952 | - | 0.750 | Mlig455_050890 {REF} {Length: 843} {Pfam: FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=59.4]} {Human: ENSG00000093217, XYLB, xylulokinase, [Score=105, Expect=6e-26]} {Mouse: ENSMUSG00000035769, Xylb, xylulokinase homolog (H. influenzae), [Score=106, Expect=3e-26]} {Dmel: FBgn0038463, CG3534, [Score=100, Expect=3e-24]} {Celegans: WBGene00011147, R08D7.7, Uncharacterized sugar kinase R08D7.7, [Score=100, Expect=2e-24]} {Smed: dd_Smed_v6_11103_1_8, dd_Smed_v6_11103_1_8, [Score=89.0, Expect=5e-21]} {RNA1509_27855} {RNA1310_8740} {RNA815_3649.1} |
| 4. | MligTC455_45395 | 1764 | 36.76 | Mlig455_001728, Mlig455_063313 | Neo: - Age: - |
STK19 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_001728 {REF} {Length: 1572} {RNA1509_14993} {RNA1310_24145} {RNA815_9902.1} Mlig455_063313 {REF} {Length: 1663} {TRANSSPLICED} {Pfam: Serine-threonine protein kinase 19 [PF10494.11, score=98.7]} {Human: ENSG00000206342, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=2e-34]; ENSG00000236250, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]; ENSG00000226257, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]; ENSG00000204344, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=3e-34]; ENSG00000226033, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=3e-34]; ENSG00000234947, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]} {Mouse: ENSMUSG00000061207, Stk19, serine/threonine kinase 19, [RH, Score=124, Expect=5e-34]} {RNA1509_14993, RNA1509_47033} {RNA1310_24145, RNA1509_14993, RNA1509_47033} {RNA1509_14993, RNA1509_47033, RNA815_9902.1} |
| 5. | MligTC455_49550 | 650 | 13.55 | Mlig455_035011 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_035011 {REF} {Length: 1151} {RNA1509_15666, RNA1509_28504} {RNA1310_5704, RNA1509_28504} {RNA1509_28504, RNA815_33238} | |
| 6. | MligTC455_46283 | 1794 | 37.38 | Mlig455_061643 | Neo: Neoblast, stringent Age: - |
AQR | 0.951 | - | - | - | 0.951 | - | - | Mlig455_061643 {REF} {Length: 6320} {TRANSSPLICED} {Pfam: Intron-binding protein aquarius N-terminus [PF16399.7, score=841.4]; AAA domain [PF13086.8, score=94.1]; AAA domain [PF13087.8, score=85.5]; AAA domain [PF13245.8, score=32.1]; Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=25.7]; Type III restriction enzyme, res subunit [PF04851.17, score=23.9]; AAA ATPase domain [PF13191.8, score=19.3]} {Human: ENSG00000021776, AQR, aquarius intron-binding spliceosomal factor, [RH, Score=1501, Expect=0.0]} {Mouse: ENSMUSG00000040383, Aqr, aquarius, [RH, Score=1504, Expect=0.0]} {Dmel: FBgn0051368, CG31368, [RH, Score=1458, Expect=0.0]} {Celegans: WBGene00001258, emb-4, [RH, Score=1301, Expect=0.0]} {Smed: dd_Smed_v6_7822_0_1, dd_Smed_v6_7822_0_1, [RH, Score=1275, Expect=0.0]} {RNA1509_4495} {RNA1310_1537.1} {RNA815_404} |
| 7. | MligTC455_16259 | 1045 | 21.77 | Mlig455_028228 | Neo: - Age: - |
MORF4L1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_028228 {REF} {Length: 1589} {TRANSSPLICED} {Pfam: MRG [PF05712.15, score=87.2]; RNA binding activity-knot of a chromodomain [PF11717.10, score=51.1]} {Human: ENSG00000185787, MORF4L1, mortality factor 4 like 1, [RH, Score=192, Expect=6e-58]} {Mouse: ENSMUSG00000062270, Morf4l1, mortality factor 4 like 1, [RH, Score=192, Expect=4e-58]} {Dmel: FBgn0027378, MRG15, MORF-related gene 15, [RH, Score=87.0, Expect=2e-18]} {Celegans: WBGene00003406, mrg-1, MRG (Mortality factor-Related Gene) related, [RH, Score=80.1, Expect=1e-16]} {Smed: dd_Smed_v6_5890_0_4, dd_Smed_v6_5890_0_4, [RH, Score=199, Expect=6e-60]} {RNA1509_35919} {RNA1310_2177} {RNA815_2763.1} |
Berezikov Lab - 2020-2021 © ERIBA