TomoSeq data search

Data search

Results for MligTC455_08466

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08466

882

18.38

Mlig455_050890

Neo: -

Age: -

XYLB

Mlig455_050890 {REF} {Length: 843} {Pfam: FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=59.4]} {Human: ENSG00000093217, XYLB, xylulokinase, [Score=105, Expect=6e-26]} {Mouse: ENSMUSG00000035769, Xylb, xylulokinase homolog (H. influenzae), [Score=106, Expect=3e-26]} {Dmel: FBgn0038463, CG3534, [Score=100, Expect=3e-24]} {Celegans: WBGene00011147, R08D7.7, Uncharacterized sugar kinase R08D7.7, [Score=100, Expect=2e-24]} {Smed: dd_Smed_v6_11103_1_8, dd_Smed_v6_11103_1_8, [Score=89.0, Expect=5e-21]} {RNA1509_27855} {RNA1310_8740} {RNA815_3649.1}

Cumulative graph for MligTC455_08466

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.469	4.428	0.62711	1.00000
RegionR2	0.167	4.428	0.73808	1.00000
RegionR3	0.5	4.428	0.21509	0.75646
RegionR4	0.616	4.428	0.16992	0.43312
RegionR5	0.351	4.428	0.35331	0.70345
RegionR6	0.191	4.428	0.64726	1.00000
RegionR7	0.029	4.428	0.95252	1.00000
RegionR8	-2.324	4.428	0.01458	0.23496

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.944	4.428	0.48505	1.00000
RegenerationR2	0.149	4.428	0.72455	0.96383
RegenerationR3	-0.105	4.428	0.81469	0.98621
RegenerationR4	0.177	4.428	0.69842	0.95279
RegenerationR5	0.094	4.428	0.82796	0.99697
RegenerationR6	0.418	4.428	0.35591	0.70080
RegenerationBL	1.004	4.428	0.08719	0.34624
RegenerationTP	1.153	4.428	0.10754	0.50662

Genes with expression patterns similar to MligTC455_08466

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08466	882	18.38	Mlig455_050890	Neo: - Age: -	XYLB	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050890 {REF} {Length: 843} {Pfam: FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=59.4]} {Human: ENSG00000093217, XYLB, xylulokinase, [Score=105, Expect=6e-26]} {Mouse: ENSMUSG00000035769, Xylb, xylulokinase homolog (H. influenzae), [Score=106, Expect=3e-26]} {Dmel: FBgn0038463, CG3534, [Score=100, Expect=3e-24]} {Celegans: WBGene00011147, R08D7.7, Uncharacterized sugar kinase R08D7.7, [Score=100, Expect=2e-24]} {Smed: dd_Smed_v6_11103_1_8, dd_Smed_v6_11103_1_8, [Score=89.0, Expect=5e-21]} {RNA1509_27855} {RNA1310_8740} {RNA815_3649.1}
2.	MligTC455_16948	708	14.75	Mlig455_030592	Neo: - Age: -	DDX51	3.362	0.721	0.802	-	0.876	0.963	-	Mlig455_030592 {REF} {Length: 1836} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=104.2]; Helicase conserved C-terminal domain [PF00271.33, score=74.0]; AAA domain [PF13401.8, score=23.9]} {Human: ENSG00000185163, DDX51, DEAD-box helicase 51, [RH, Score=297, Expect=3e-92]} {Mouse: ENSMUSG00000029504, Ddx51, DEAD (Asp-Glu-Ala-Asp) box polypeptide 51, [RH, Score=296, Expect=4e-92]} {Dmel: FBgn0004556, Dbp73D, Dead box protein 73D, [RH, Score=257, Expect=4e-77]} {Celegans: WBGene00022792, ZK686.2, Putative ATP-dependent RNA helicase ZK686.2, [RH, Score=189, Expect=2e-52]} {Smed: dd_Smed_v6_12279_0_2, dd_Smed_v6_12279_0_2, [RH, Score=310, Expect=4e-99]} {RNA1509_15723, RNA1509_58505} {RNA1310_6602, RNA1509_15723, RNA1509_58505} {RNA1509_15723, RNA1509_58505, RNA815_6752}
3.	MligTC455_27190	686	14.3	Mlig455_069689	Neo: - Age: - Region-enriched R5: 2.147/0.01781 Regeneration-upregulated BL: 2.726 Regeneration-enriched BL: 2.726	RIOX1	2.656	-	-	-	0.872	0.951	0.833	Mlig455_069689 {REF} {Length: 1997} {TRANSSPLICED} {Pfam: Cupin superfamily protein [PF08007.14, score=211.7]; Cupin-like domain [PF13621.8, score=27.0]} {Human: ENSG00000170468, RIOX1, ribosomal oxygenase 1, [RH, Score=397, Expect=2e-130]} {Mouse: ENSMUSG00000046791, Riox1, ribosomal oxygenase 1, [RH, Score=395, Expect=6e-130]} {Dmel: FBgn0266570, CG2982, [RH, Score=329, Expect=3e-104]} {Celegans: WBGene00020902, jmjc-1, Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, [RH, Score=273, Expect=4e-82]} {RNA1509_19703} {RNA1310_13539, RNA1509_19703} {RNA1509_19703, RNA815_7796}
4.	MligTC455_38770	397	8.28	Mlig455_018183	Neo: - Age: Down-Down-Up	NIT1	1.873	-	-	-	0.955	0.918	-	Mlig455_018183 {REF} {Length: 2149} {TRANSSPLICED} {Pfam: Carbon-nitrogen hydrolase [PF00795.24, score=191.2]; HIT domain [PF01230.25, score=67.3]; Ribosomal L29 protein [PF00831.25, score=63.8]} {Human: ENSG00000158793, NIT1, nitrilase 1, [RH, Score=256, Expect=8e-80]} {Mouse: ENSMUSG00000013997, Nit1, nitrilase 1, [RH, Score=264, Expect=8e-83]} {Dmel: FBgn0024945, NitFhit, Nitrilase and fragile histidine triad fusion protein, [RH, Score=312, Expect=6e-100]} {Celegans: WBGene00003594, nft-1, Nitrilase and fragile histidine triad fusion protein NitFhit Bis(5'-adenosyl)-triphosphatase Nitrilase homolog, [RH, Score=361, Expect=5e-119]} {Smed: dd_Smed_v6_2711_0_1, dd_Smed_v6_2711_0_1, [RH, Score=401, Expect=8e-135]} {RNA1509_19262} {RNA1310_18639.1} {RNA815_7752.1}
5.	MligTC455_48738	3747	78.06	Mlig455_002401, Mlig455_057636, Mlig455_060154	Neo: Int S/G2/M Age: logFC(26M/2M)=0.346 Region-enriched R5: 1.033/0.00363	MRPL3	1.792	-	-	-	0.950	0.842	-	Mlig455_002401 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.24, score=40.1]; Ribosomal protein S6 [PF01250.19, score=34.0]} {Human: ENSG00000114686, MRPL3, mitochondrial ribosomal protein L3, [RH, Score=166, Expect=3e-46]} {Mouse: ENSMUSG00000032563, Mrpl3, mitochondrial ribosomal protein L3, [RH, Score=159, Expect=8e-44]} {Dmel: FBgn0030686, mRpL3, mitochondrial ribosomal protein L3, [RH, Score=196, Expect=1e-57]} {Celegans: WBGene00016142, mrps-18C, Putative 39S ribosomal protein L3, mitochondrial, [RH, Score=124, Expect=9e-31]} {Smed: dd_Smed_v6_2057_0_1, dd_Smed_v6_2057_0_1, [RH, Score=276, Expect=2e-88]} {RNA1509_40692} {RNA1310_23165} {RNA815_9925.1} Mlig455_057636 {REF} {Length: 1417} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.24, score=41.0]} {Human: ENSG00000114686, MRPL3, mitochondrial ribosomal protein L3, [RH, Score=165, Expect=6e-47]} {Mouse: ENSMUSG00000032563, Mrpl3, mitochondrial ribosomal protein L3, [RH, Score=159, Expect=3e-45]} {Dmel: FBgn0030686, mRpL3, mitochondrial ribosomal protein L3, [RH, Score=196, Expect=3e-59]} {Celegans: WBGene00016142, mrps-18C, Putative 39S ribosomal protein L3, mitochondrial, [RH, Score=121, Expect=7e-31]} {Smed: dd_Smed_v6_2057_0_1, dd_Smed_v6_2057_0_1, [RH, Score=276, Expect=3e-90]} {RNA1509_26077} {RNA1310_23165, RNA1509_26077} {RNA1509_26077, RNA815_9925.1} Mlig455_060154 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Ribosomal protein L3 [PF00297.24, score=39.0]; Ribosomal protein S6 [PF01250.19, score=34.1]} {Human: ENSG00000114686, MRPL3, mitochondrial ribosomal protein L3, [RH, Score=164, Expect=3e-45]} {Mouse: ENSMUSG00000032563, Mrpl3, mitochondrial ribosomal protein L3, [RH, Score=160, Expect=3e-44]} {Dmel: FBgn0030686, mRpL3, mitochondrial ribosomal protein L3, [RH, Score=197, Expect=3e-58]} {Celegans: WBGene00016142, mrps-18C, Putative 39S ribosomal protein L3, mitochondrial, [RH, Score=124, Expect=7e-31]} {Smed: dd_Smed_v6_2057_0_1, dd_Smed_v6_2057_0_1, [RH, Score=280, Expect=1e-89]} {RNA1509_40692} {RNA1310_23165} {RNA815_9925.1}
6.	MligTC455_30042	1037	21.59	Mlig455_033567, Mlig455_067056	Neo: - Age: -	TMEM94	1.76	-	-	-	0.802	0.958	-	Mlig455_033567 {REF} {Length: 5439} {Human: ENSG00000177728, TMEM94, transmembrane protein 94, [RH, Score=212, Expect=5e-55]} {Mouse: ENSMUSG00000020747, Tmem94, transmembrane protein 94, [RH, Score=212, Expect=4e-55]} {Dmel: FBgn0022153, l(2)k05819, lethal (2) k05819, [RH, Score=407, Expect=2e-119]} {Celegans: WBGene00017010, D1007.15, [RH, Score=197, Expect=8e-51]} {Smed: dd_Smed_v6_12358_0_1, dd_Smed_v6_12358_0_1, [RH, Score=333, Expect=6e-96]} {RNA1509_7674} {RNA1310_1886.1} {RNA815_651} Mlig455_067056 {REF} {Length: 5609} {TRANSSPLICED} {Human: ENSG00000177728, TMEM94, transmembrane protein 94, [Score=192, Expect=7e-49]} {Mouse: ENSMUSG00000020747, Tmem94, transmembrane protein 94, [Score=192, Expect=9e-49]} {Dmel: FBgn0022153, l(2)k05819, lethal (2) k05819, [RH, Score=328, Expect=2e-91]} {Celegans: WBGene00017010, D1007.15, [Score=151, Expect=2e-36]} {Smed: dd_Smed_v6_12358_0_1, dd_Smed_v6_12358_0_1, [Score=307, Expect=2e-86]} {RNA1509_7674} {RNA1310_1886.1} {RNA815_651}
7.	MligTC455_11393	1140	23.74	Mlig455_039930	Neo: Irradiation Age: Up-Down-Up	NRDC	1.708	-	-	-	-	0.753	0.955	Mlig455_039930 {REF} {Length: 1657} {Human: ENSG00000078618, NRDC, nardilysin convertase, [Score=84.0, Expect=3e-18]} {Mouse: ENSMUSG00000053510, Nrd1, nardilysin, N-arginine dibasic convertase, NRD convertase 1, [Score=86.7, Expect=2e-19]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [Score=71.2, Expect=3e-14]} {Smed: dd_Smed_v6_5554_0_1, dd_Smed_v6_5554_0_1, [Score=87.0, Expect=9e-20]} {RNA1509_54117} {RNA1310_5306} {RNA815_766.1}
8.	MligTC455_52930	639	13.32	Mlig455_051859, Mlig455_053164	Neo: - Age: Up-Down-Down		1.702	-	-	-	0.952	-	0.750	Mlig455_051859 {REF} {Length: 246} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56431} {RNA1310_33398} {RNA815_15276} Mlig455_053164 {REF} {Length: 250} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56431} {RNA1310_33398} {RNA815_15276}
9.	MligTC455_35521	1684	35.08	Mlig455_006137	Neo: - Age: -	AP3D1	1.684	-	-	0.725	-	-	0.959	Mlig455_006137 {REF} {Length: 5624} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=428.0]; AP-3 complex subunit delta-1 [PF06375.13, score=64.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=56.9]; HEAT repeats [PF13646.8, score=24.2]; HEAT repeat [PF02985.24, score=22.8]} {Human: ENSG00000065000, AP3D1, adaptor related protein complex 3 subunit delta 1, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000020198, Ap3d1, adaptor-related protein complex 3, delta 1 subunit, [RH, Score=950, Expect=0.0]} {Dmel: FBgn0001087, g, garnet, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00000162, apd-3, AP-3 complex subunit delta, [RH, Score=810, Expect=0.0]} {Smed: dd_Smed_v6_2534_0_1, dd_Smed_v6_2534_0_1, [RH, Score=892, Expect=0.0]} {RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255} {RNA1310_1080.1, RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255} {RNA1509_20502, RNA1509_2967, RNA1509_31068, RNA1509_36255, RNA815_531.1}
10.	MligTC455_53437	710	14.78	Mlig455_043076	Neo: - Age: -	MAP3K20	1.68	-	-	-	-	0.728	0.952	Mlig455_043076 {REF} {Length: 2612} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=203.7]; Protein kinase domain [PF00069.27, score=172.7]; SAM domain (Sterile alpha motif) [PF00536.32, score=33.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=30.1]} {Human: ENSG00000091436, MAP3K20, mitogen-activated protein kinase kinase kinase 20, [RH, Score=324, Expect=2e-98]} {Mouse: ENSMUSG00000004085, Map3k20, mitogen-activated protein kinase kinase kinase 20, [RH, Score=321, Expect=1e-97]} {Dmel: FBgn0036896, wnd, wallenda, [Score=201, Expect=1e-53]} {Celegans: WBGene00006971, zak-1, Mammalian ZAK kinase homolog, [RH, Score=252, Expect=8e-73]} {Smed: dd_Smed_v6_8838_0_1, dd_Smed_v6_8838_0_1, [Score=174, Expect=6e-45]} {RNA1509_14355} {RNA1310_6214.2, RNA1509_14355} {RNA1509_14355, RNA815_4745}
11.	MligTC455_42987	33	0.69	Mlig455_004214	Neo: - Age: -		0.971	-	-	-	0.971	-	-	Mlig455_004214 {REF} {Length: 1414} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=26.5]; F-box domain [PF00646.35, score=19.0]} {Dmel: FBgn0034893, mRpL43, mitochondrial ribosomal protein L43, [RH, Score=110, Expect=5e-28]} {Celegans: WBGene00007712, mrpl-34, Mitochondrial Ribosomal Protein, Large, [RH, Score=108, Expect=1e-27]} {Smed: dd_Smed_v6_4636_0_1, dd_Smed_v6_4636_0_1, [RH, Score=104, Expect=3e-26]} {RNA1509_41701} {RNA1310_20021.1} {RNA815_24275}
12.	MligTC455_27188	870	18.12	Mlig455_047559	Neo: Int S/G2/M Age: logFC(26M/2M)=0.426	RIOX1	0.964	-	-	-	0.964	-	-	Mlig455_047559 {REF} {Length: 1992} {TRANSSPLICED} {Pfam: Cupin superfamily protein [PF08007.14, score=174.8]; Cupin-like domain [PF13621.8, score=29.6]} {Human: ENSG00000170468, RIOX1, ribosomal oxygenase 1, [Score=352, Expect=9e-116]} {Mouse: ENSMUSG00000046791, Riox1, ribosomal oxygenase 1, [Score=346, Expect=5e-114]} {Dmel: FBgn0266570, CG2982, [Score=281, Expect=2e-88]} {Celegans: WBGene00020902, jmjc-1, Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, [Score=235, Expect=2e-70]} {RNA1509_12525, RNA1509_41260} {RNA1310_13539, RNA1509_12525, RNA1509_41260} {RNA1509_12525, RNA1509_41260, RNA815_7796}
13.	MligTC455_48315	926	19.3	Mlig455_020184	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_020184 {REF} {Length: 1125} {TRANSSPLICED} {RNA1509_28277, RNA1509_36330, RNA1509_38475, RNA1509_55867} {RNA1310_23755.2, RNA1509_28277, RNA1509_36330, RNA1509_38475, RNA1509_55867} {RNA1509_28277, RNA1509_36330, RNA1509_38475, RNA1509_55867, RNA815_13137}
14.	MligTC455_46021	761	15.85	Mlig455_055618	Neo: - Age: -	RRP8	0.955	-	-	-	0.955	-	-	Mlig455_055618 {REF} {Length: 1027} {TRANSSPLICED} {Pfam: Hypothetical methyltransferase [PF05148.17, score=190.3]; Methyltransferase domain [PF08241.14, score=19.8]} {Human: ENSG00000132275, RRP8, ribosomal RNA processing 8, [Score=164, Expect=1e-46]} {Mouse: ENSMUSG00000030888, Rrp8, ribosomal RNA processing 8, methyltransferase, homolog (yeast), [Score=167, Expect=5e-48]} {Dmel: FBgn0034422, CG7137, [Score=147, Expect=1e-41]} {Celegans: WBGene00020296, T07A9.8, Ribosomal RNA-processing protein 8, [RH, Score=168, Expect=1e-49]} {Smed: dd_Smed_v6_11164_0_1, dd_Smed_v6_11164_0_1, [Score=143, Expect=5e-41]} {RNA1509_24023} {RNA1310_32382} {RNA815_14841}
15.	MligTC455_51864	3698	77.03	Mlig455_025842, Mlig455_025900	Neo: - Age: -	MBOAT2	0.951	-	-	-	-	0.951	-	Mlig455_025842 {REF} {Length: 2697} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=103.7]} {Human: ENSG00000143797, MBOAT2, membrane bound O-acyltransferase domain containing 2, [RH, Score=249, Expect=8e-76]} {Mouse: ENSMUSG00000020646, Mboat2, membrane bound O-acyltransferase domain containing 2, [RH, Score=256, Expect=6e-79]} {Dmel: FBgn0033476, oys, oysgedart, [RH, Score=319, Expect=8e-101]} {Celegans: WBGene00007446, mboa-4, Lysophospholipid acyltransferase; Membrane Bound O-Acyl transferase, MBOAT, [RH, Score=206, Expect=6e-60]} {Smed: dd_Smed_v6_3131_0_1, dd_Smed_v6_3131_0_1, [RH, Score=375, Expect=3e-125]} {RNA1509_4918} {RNA1310_6419.1, RNA1509_4918} {RNA1509_4918, RNA815_2336} Mlig455_025900 {REF} {Length: 2662} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=103.7]} {Human: ENSG00000143797, MBOAT2, membrane bound O-acyltransferase domain containing 2, [RH, Score=248, Expect=1e-75]} {Mouse: ENSMUSG00000020646, Mboat2, membrane bound O-acyltransferase domain containing 2, [RH, Score=256, Expect=6e-79]} {Dmel: FBgn0033476, oys, oysgedart, [RH, Score=319, Expect=5e-101]} {Celegans: WBGene00007446, mboa-4, Lysophospholipid acyltransferase; Membrane Bound O-Acyl transferase, MBOAT, [RH, Score=206, Expect=5e-60]} {Smed: dd_Smed_v6_3131_0_1, dd_Smed_v6_3131_0_1, [RH, Score=375, Expect=4e-125]} {RNA1509_44505, RNA1509_9913} {RNA1310_6419.1, RNA1509_44505, RNA1509_9913} {RNA1509_44505, RNA1509_9913, RNA815_2336}
16.	MligTC455_49190	1159	24.15	Mlig455_022216	Neo: - Age: -	CDK19	0.95	-	-	-	-	-	0.950	Mlig455_022216 {REF} {Length: 1960} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=197.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=87.1]} {Human: ENSG00000155111, CDK19, cyclin dependent kinase 19, [RH, Score=578, Expect=0.0]; ENSG00000132964, CDK8, cyclin dependent kinase 8, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000038481, Cdk19, cyclin-dependent kinase 19, [RH, Score=577, Expect=0.0]; ENSMUSG00000029635, Cdk8, cyclin-dependent kinase 8, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0015618, Cdk8, Cyclin-dependent kinase 8, [RH, Score=568, Expect=0.0]} {Celegans: WBGene00000409, cdk-8, Cyclin-dependent kinase 8, [RH, Score=461, Expect=1e-157]} {Smed: dd_Smed_v6_6004_0_2, dd_Smed_v6_6004_0_2, [RH, Score=521, Expect=0.0]} {RNA1509_7227} {RNA1310_14524, RNA1509_7227} {RNA1509_7227, RNA815_4672.1}

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