Data search


search
Exact
Search

Results for MligTC455_53056

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53056 433 9.02 Mlig455_016578, Mlig455_035599, Mlig455_035608

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.573

Region-enriched R3: 3.354/0.00002

Mlig455_016578 {REF} {Length: 7355} {Pfam: Haemolysin-type calcium binding protein related domain [PF06594.13, score=47.1]; EAL domain [PF00563.22, score=20.8]} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=64.3, Expect=1e-10]} {RNA1509_42800} {RNA1310_945.1} {RNA815_1511.1}

Mlig455_035599 {REF} {Length: 7073} {Pfam: Haemolysin-type calcium binding protein related domain [PF06594.13, score=47.5]; RTX C-terminal domain [PF08339.12, score=19.7]} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=65.1, Expect=6e-11]} {RNA1509_42800} {RNA1310_945.1} {RNA815_1511.1}

Mlig455_035608 {REF} {Length: 5924} {Pfam: Haemolysin-type calcium binding protein related domain [PF06594.13, score=34.1]; RTX C-terminal domain [PF08339.12, score=22.3]} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=65.9, Expect=3e-11]} {RNA1509_10045, RNA1509_40204, RNA1509_47229, RNA1509_54966} {RNA1310_945.1, RNA1509_10045, RNA1509_40204, RNA1509_47229} {RNA1509_10045, RNA1509_40204, RNA1509_47229, RNA815_1511.1}

Cumulative graph for MligTC455_53056

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.869 3.787 0.30023 0.94957
RegionR2 1.284 3.787 0.20625 0.56885
RegionR3 3.354 3.787 0.00000 0.00002
RegionR4 0.226 3.787 0.76915 1.00000
RegionR5 0.148 3.787 0.81571 1.00000
RegionR6 -1.141 3.787 0.20156 0.77397
RegionR7 -1.256 3.787 0.31521 0.94976
RegionR8 -0.745 3.787 0.65131 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.691 3.787 0.42939 1.00000
RegenerationR2 0.367 3.787 0.64119 0.93176
RegenerationR3 -0.653 3.787 0.36466 0.78005
RegenerationR4 -0.215 3.787 0.77414 0.97832
RegenerationR5 -0.49 3.787 0.50879 0.86308
RegenerationR6 0.876 3.787 0.33667 0.68301
RegenerationBL -2.391 3.787 0.16705 0.48989
RegenerationTP -0.259 3.787 0.85887 1.00000


Genes with expression patterns similar to MligTC455_53056

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53056 433 9.02 Mlig455_016578, Mlig455_035599, Mlig455_035608

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.573

Region-enriched R3: 3.354/0.00002

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_016578 {REF} {Length: 7355} {Pfam: Haemolysin-type calcium binding protein related domain [PF06594.13, score=47.1]; EAL domain [PF00563.22, score=20.8]} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=64.3, Expect=1e-10]} {RNA1509_42800} {RNA1310_945.1} {RNA815_1511.1}

Mlig455_035599 {REF} {Length: 7073} {Pfam: Haemolysin-type calcium binding protein related domain [PF06594.13, score=47.5]; RTX C-terminal domain [PF08339.12, score=19.7]} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=65.1, Expect=6e-11]} {RNA1509_42800} {RNA1310_945.1} {RNA815_1511.1}

Mlig455_035608 {REF} {Length: 5924} {Pfam: Haemolysin-type calcium binding protein related domain [PF06594.13, score=34.1]; RTX C-terminal domain [PF08339.12, score=22.3]} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=65.9, Expect=3e-11]} {RNA1509_10045, RNA1509_40204, RNA1509_47229, RNA1509_54966} {RNA1310_945.1, RNA1509_10045, RNA1509_40204, RNA1509_47229} {RNA1509_10045, RNA1509_40204, RNA1509_47229, RNA815_1511.1}
2. MligTC455_53055 150 3.12 Mlig455_016633

Neo: -

Age: -

Region-enriched R3: 2.528/0.00563

5.938 0.995 0.987 0.998 0.974 0.993 0.991 Mlig455_016633 {REF} {Length: 2904} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=65.5, Expect=1e-11]} {RNA1509_54966} {RNA1310_945.1} {RNA815_1511.1}
3. MligTC455_13372 54 1.13 Mlig455_003666, Mlig455_003876

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=1.830

Region-enriched R4: 5.705/0.00171

1.87 - - - - 0.954 0.916

Mlig455_003666 {REF} {Length: 2129} {RNA1310_43536} {RNA815_30577}

Mlig455_003876 {REF} {Length: 2738} {RNA1310_27600.1} {RNA815_30577}
4. MligTC455_30242 16 0.33 Mlig455_044882, Mlig455_044883, Mlig455_044986, Mlig455_044988, Mlig455_052686, Mlig455_070556

Neo: -

Age: logFC(26M/2M)=0.714

PIF1 1.674 - - - - 0.966 0.708

Mlig455_044882 {REF} {Length: 7531} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=93.7]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193}

Mlig455_044883 {REF} {Length: 5877} {Pfam: PIF1-like helicase [PF05970.16, score=89.6]; Helitron helicase-like domain at N-terminus [PF14214.8, score=80.5]; AAA domain [PF13604.8, score=52.4]; AAA domain [PF13245.8, score=36.0]; AAA ATPase domain [PF13191.8, score=19.0]; ATP-dependent RecD-like DNA helicase SH3 domain [PF18335.3, score=18.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=64.7, Expect=5e-10]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=65.5, Expect=3e-10]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=62.0, Expect=2e-09]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=63.5, Expect=5e-10]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=58.5, Expect=1e-08]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193}

Mlig455_044986 {REF} {Length: 2141} {Pfam: OTU-like cysteine protease [PF02338.21, score=24.6]; Family of unknown function (DUF6139) [PF19636.1, score=18.9]; Peptidase C65 Otubain [PF10275.11, score=18.3]} {RNA1509_7562} {RNA1310_912.1} {RNA815_4349}

Mlig455_044988 {REF} {Length: 7397} {Pfam: PIF1-like helicase [PF05970.16, score=89.6]; Helitron helicase-like domain at N-terminus [PF14214.8, score=80.5]; AAA domain [PF13604.8, score=52.4]; AAA domain [PF13245.8, score=36.0]; AAA ATPase domain [PF13191.8, score=19.0]; ATP-dependent RecD-like DNA helicase SH3 domain [PF18335.3, score=18.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=64.7, Expect=5e-10]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=65.5, Expect=3e-10]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=62.0, Expect=2e-09]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=63.5, Expect=5e-10]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=58.5, Expect=1e-08]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193}

Mlig455_052686 {REF} {Length: 8043} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=99.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=80.3]; AAA domain [PF13604.8, score=61.3]; AAA domain [PF13245.8, score=35.9]; Helicase [PF02689.16, score=23.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=22.5]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=5e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=128, Expect=5e-30]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=122, Expect=2e-28]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=120, Expect=5e-28]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=112, Expect=3e-25]} {RNA1509_2607} {RNA1310_5853.1} {RNA815_4349}

Mlig455_070556 {REF} {Length: 425} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=49.3, Expect=4e-07]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=49.7, Expect=2e-07]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=46.2, Expect=2e-06]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=46.6, Expect=1e-06]} {RNA1509_2607} {RNA1310_5853.3} {RNA815_5517.2}
5. MligTC455_09478 42 0.88 Mlig455_008774

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_008774 {REF} {Length: 1365} {Pfam: RAM signalling pathway protein [PF10428.11, score=19.4]} {RNA1509_53279} {RNA1310_34746} {RNA815_43491}
6. MligTC455_46263 67 1.39 Mlig455_058665

Neo: -

Age: -

SLC26A1 0.966 - - - - 0.966 - Mlig455_058665 {REF} {Length: 1886} {Pfam: STAS domain [PF01740.23, score=89.4]; Sulfate permease family [PF00916.22, score=38.8]; STAS domain [PF13466.8, score=26.9]} {Human: ENSG00000145217, SLC26A1, solute carrier family 26 member 1, [Score=68.2, Expect=8e-12]} {Mouse: ENSMUSG00000020651, Slc26a4, solute carrier family 26, member 4, [Score=71.2, Expect=5e-13]} {Dmel: FBgn0036770, Prestin, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00017464, sulp-2, Anion transporter SULP-2; SULfate Permease family, [Score=69.7, Expect=9e-13]} {Smed: dd_Smed_v6_10602_0_1, dd_Smed_v6_10602_0_1, [Score=71.6, Expect=1e-13]} {RNA1509_45237} {RNA1310_30910} {RNA815_30992}
7. MligTC455_50898 26 0.55 Mlig455_053568

Neo: -

Age: -

Region-enriched R4: 5.983/0.00107

0.961 - - - 0.961 - - Mlig455_053568 {REF} {Length: 1320} {RNA1509_27480} {RNA1310_54225} {RNA815_31675}
8. MligTC455_41544 38 0.8 Mlig455_004081

Neo: -

Age: Up-Down-Up

0.958 - - - 0.958 - - Mlig455_004081 {REF} {Length: 3551} {Pfam: F5/8 type C domain [PF00754.27, score=23.5]} {RNA1310_43457}
9. MligTC455_11402 21 0.44 Mlig455_058743

Neo: -

Age: -

0.957 - - - - 0.957 - Mlig455_058743 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59423} {RNA1310_39651} {RNA815_29881}
10. MligTC455_43395 39 0.81 Mlig455_036648

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_036648 {REF} {Length: 1263} {RNA1310_36062} {RNA815_46858}
11. MligTC455_36935 35 0.72 Mlig455_051430

Neo: -

Age: -

PARD3 0.955 - - - 0.955 - - Mlig455_051430 {REF} {Length: 4356} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=71.9]; N-terminal of Par3 and HAL proteins [PF12053.10, score=69.3]; PDZ domain [PF17820.3, score=48.1]; PDZ domain [PF13180.8, score=34.2]} {Human: ENSG00000148498, PARD3, par-3 family cell polarity regulator, [Score=150, Expect=2e-36]} {Mouse: ENSMUSG00000025812, Pard3, par-3 family cell polarity regulator, [Score=146, Expect=3e-35]} {Dmel: FBgn0000163, baz, bazooka, [Score=153, Expect=2e-37]} {Celegans: WBGene00003918, par-3, Partitioning defective protein 3, [Score=82.0, Expect=1e-15]} {Smed: dd_Smed_v6_11296_0_2, dd_Smed_v6_11296_0_2, [Score=115, Expect=8e-26]} {RNA1509_28187} {RNA1310_21435} {RNA815_17635.1}
12. MligTC455_01380 20 0.42 Mlig455_006074

Neo: -

Age: -

0.954 - - - - - 0.954 Mlig455_006074 {REF} {Length: 823} {NoTransDecoderORF} {RNA1509_27021} {RNA1310_10847.1} {RNA815_5428.1}
13. MligTC455_16625 45 0.94 Mlig455_019351

Neo: -

Age: -

Region-enriched R3: 4.565/0.00157

0.954 - - - - 0.954 - Mlig455_019351 {REF} {Length: 2232} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=38.9]; Male sterility protein [PF07993.14, score=34.4]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=30.8]; RmlD substrate binding domain [PF04321.19, score=21.9]; GDP-mannose 4,6 dehydratase [PF16363.7, score=19.1]} {Smed: dd_Smed_v6_12075_0_1, dd_Smed_v6_12075_0_1, [Score=56.6, Expect=9e-09]} {RNA1509_44711} {RNA1310_30985} {RNA815_13916}
14. MligTC455_23635 11 0.22 Mlig455_067931

Neo: Germline

Age: -

0.954 - - - - 0.954 - Mlig455_067931 {REF} {Length: 2254} {RNA1509_46642} {RNA1310_7864} {RNA815_30316}
15. MligTC455_40336 56 1.16 Mlig455_003699, Mlig455_003907

Neo: -

Age: Up-Down-Down

Regeneration-upregulated R3: 7.384

Regeneration-enriched R3: 7.384

0.954 - - - - 0.954 -

Mlig455_003699 {REF} {Length: 386} {NoTransDecoderORF} {RNA1509_35761} {RNA1310_13240} {RNA815_5118}

Mlig455_003907 {REF} {Length: 420} {NoTransDecoderORF} {RNA1509_35761} {RNA1310_13240} {RNA815_5118}
16. MligTC455_38156 18 0.38 Mlig455_042121

Neo: -

Age: -

ATP7A 0.952 - - - - 0.952 - Mlig455_042121 {REF} {Length: 5074} {TRANSSPLICED} {Pfam: Heavy-metal-associated domain [PF00403.28, score=274.9]; E1-E2 ATPase [PF00122.22, score=156.0]; haloacid dehalogenase-like hydrolase [PF00702.28, score=155.4]; haloacid dehalogenase-like hydrolase [PF08282.14, score=34.0]} {Human: ENSG00000165240, ATP7A, ATPase copper transporting alpha, [RH, Score=1022, Expect=0.0]; ENSG00000123191, ATP7B, ATPase copper transporting beta, [RH, Score=991, Expect=0.0]} {Mouse: ENSMUSG00000033792, Atp7a, ATPase, Cu++ transporting, alpha polypeptide, [RH, Score=1034, Expect=0.0]} {Dmel: FBgn0030343, ATP7, [RH, Score=916, Expect=0.0]} {Celegans: WBGene00000834, cua-1, CU (Copper) ATPase; Copper transporting ATPase, [RH, Score=789, Expect=0.0]} {Smed: dd_Smed_v6_7126_0_1, dd_Smed_v6_7126_0_1, [RH, Score=992, Expect=0.0]} {RNA1509_10172, RNA1509_15890, RNA1509_31821} {RNA1310_1414, RNA1509_10172, RNA1509_15890, RNA1509_31821} {RNA1509_10172, RNA1509_15890, RNA1509_31821, RNA815_389}
17. MligTC455_39158 46 0.97 Mlig455_052312

Neo: -

Age: -

UNC93A 0.952 - - - - 0.952 - Mlig455_052312 {REF} {Length: 1515} {Pfam: Major Facilitator Superfamily [PF07690.18, score=40.4]} {Human: ENSG00000112494, UNC93A, unc-93 homolog A, [Score=169, Expect=6e-47]} {Mouse: ENSMUSG00000056133, Unc93a2, unc-93 homolog A2, [Score=162, Expect=1e-44]; ENSMUSG00000067049, Unc93a, unc-93 homolog A, [Score=162, Expect=2e-44]} {Dmel: FBgn0027556, CG4928, [Score=197, Expect=3e-57]} {Celegans: WBGene00006822, unc-93, Putative potassium channel regulatory protein unc-93, [Score=145, Expect=2e-37]} {RNA1310_8603.1} {RNA815_11843}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA