Data search
Results for MligTC455_53159
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53159 | 334 | 6.96 | Mlig455_060787 | Neo: Int S/G2/M Age: - |
KCTD9 | Mlig455_060787 {REF} {Length: 4157} {TRANSSPLICED} {Pfam: Pentapeptide repeats (8 copies) [PF00805.24, score=118.5]; BTB/POZ domain [PF02214.24, score=71.3]; Pentapeptide repeats (9 copies) [PF13599.8, score=53.5]; Pentapeptide repeats (9 copies) [PF13576.8, score=52.1]} {Human: ENSG00000104756, KCTD9, potassium channel tetramerization domain containing 9, [RH, Score=278, Expect=3e-91]} {Mouse: ENSMUSG00000034327, Kctd9, potassium channel tetramerisation domain containing 9, [RH, Score=278, Expect=2e-91]} {Dmel: FBgn0037244, CG14647, [RH, Score=231, Expect=6e-74]} {Celegans: WBGene00016871, inso-1, INSOmniac (Drosophila sleep affecting) homolog, [Score=94.0, Expect=3e-22]} {Smed: dd_Smed_v6_1496_0_1, dd_Smed_v6_1496_0_1, [Score=94.0, Expect=6e-23]} {RNA1509_27249, RNA1509_35107, RNA1509_41051} {RNA1310_16389, RNA1509_27249, RNA1509_35107, RNA1509_41051} {RNA1509_27249, RNA1509_35107, RNA1509_41051, RNA815_9724} |
Cumulative graph for MligTC455_53159
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.359 | 3.127 | 0.75467 | 1.00000 | |
| RegionR2 | -0.456 | 3.127 | 0.40393 | 0.79773 | |
| RegionR3 | 0.262 | 3.127 | 0.54117 | 1.00000 | |
| RegionR4 | 0.667 | 3.127 | 0.16354 | 0.42315 | |
| RegionR5 | 0.36 | 3.127 | 0.36930 | 0.72195 | |
| RegionR6 | 0.613 | 3.127 | 0.15642 | 0.70499 | |
| RegionR7 | 0.042 | 3.127 | 0.94125 | 1.00000 | |
| RegionR8 | -1.847 | 3.127 | 0.05962 | 0.47680 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.201 | 3.127 | 0.07122 | 0.75387 | |
| RegenerationR2 | -0.064 | 3.127 | 0.88654 | 1.00000 | |
| RegenerationR3 | -0.946 | 3.127 | 0.04286 | 0.36216 | |
| RegenerationR4 | -0.728 | 3.127 | 0.11765 | 0.52301 | |
| RegenerationR5 | -0.23 | 3.127 | 0.58223 | 0.90142 | |
| RegenerationR6 | -1.068 | 3.127 | 0.02923 | 0.21337 | |
| RegenerationBL | -1.083 | 3.127 | 0.20337 | 0.54331 | |
| RegenerationTP | 0.455 | 3.127 | 0.56890 | 0.94406 |
Genes with expression patterns similar to MligTC455_53159
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53159 | 334 | 6.96 | Mlig455_060787 | Neo: Int S/G2/M Age: - |
KCTD9 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060787 {REF} {Length: 4157} {TRANSSPLICED} {Pfam: Pentapeptide repeats (8 copies) [PF00805.24, score=118.5]; BTB/POZ domain [PF02214.24, score=71.3]; Pentapeptide repeats (9 copies) [PF13599.8, score=53.5]; Pentapeptide repeats (9 copies) [PF13576.8, score=52.1]} {Human: ENSG00000104756, KCTD9, potassium channel tetramerization domain containing 9, [RH, Score=278, Expect=3e-91]} {Mouse: ENSMUSG00000034327, Kctd9, potassium channel tetramerisation domain containing 9, [RH, Score=278, Expect=2e-91]} {Dmel: FBgn0037244, CG14647, [RH, Score=231, Expect=6e-74]} {Celegans: WBGene00016871, inso-1, INSOmniac (Drosophila sleep affecting) homolog, [Score=94.0, Expect=3e-22]} {Smed: dd_Smed_v6_1496_0_1, dd_Smed_v6_1496_0_1, [Score=94.0, Expect=6e-23]} {RNA1509_27249, RNA1509_35107, RNA1509_41051} {RNA1310_16389, RNA1509_27249, RNA1509_35107, RNA1509_41051} {RNA1509_27249, RNA1509_35107, RNA1509_41051, RNA815_9724} |
| 2. | MligTC455_53160 | 190 | 3.95 | Mlig455_060816 | Neo: - Age: - |
3.34 | - | - | 0.961 | 0.732 | 0.730 | 0.917 | Mlig455_060816 {REF} {Length: 1724} {NoTransDecoderORF} {RNA1509_35107} {RNA1310_16389} {RNA815_7096.1} | |
| 3. | MligTC455_40496 | 617 | 12.86 | Mlig455_069183 | Neo: - Age: logFC(26M/2M)=-0.458 |
NOVA1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_069183 {REF} {Length: 3366} {Pfam: KH domain [PF00013.31, score=143.8]; KH domain [PF07650.19, score=43.1]; KH domain [PF13083.8, score=35.3]; NusA-like KH domain [PF13184.8, score=21.0]} {Human: ENSG00000139910, NOVA1, NOVA alternative splicing regulator 1, [RH, Score=227, Expect=3e-68]; ENSG00000104967, NOVA2, NOVA alternative splicing regulator 2, [RH, Score=219, Expect=3e-65]} {Mouse: ENSMUSG00000030411, Nova2, neuro-oncological ventral antigen 2, [RH, Score=219, Expect=2e-65]; ENSMUSG00000021047, Nova1, neuro-oncological ventral antigen 1, [RH, Score=215, Expect=1e-63]} {Dmel: FBgn0261552, ps, pasilla, [RH, Score=266, Expect=1e-82]} {Celegans: WBGene00013347, nova-1, NOVA kh (KH) homology domain homolog, [Score=137, Expect=8e-36]} {Smed: dd_Smed_v6_5632_0_1, dd_Smed_v6_5632_0_1, [Score=288, Expect=2e-90]} {RNA1509_31662, RNA1509_33570, RNA1509_3460, RNA1509_41488, RNA1509_6827} {RNA1310_9292, RNA1509_31662, RNA1509_33570, RNA1509_3460, RNA1509_41488, RNA1509_6827} {RNA1509_31662, RNA1509_33570, RNA1509_3460, RNA1509_41488, RNA1509_6827, RNA815_4794} |
Berezikov Lab - 2020-2021 © ERIBA