TomoSeq data search

Data search

Results for MligTC455_53160

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_53160	190	3.95	Mlig455_060816	Neo: - Age: -		Mlig455_060816 {REF} {Length: 1724} {NoTransDecoderORF} {RNA1509_35107} {RNA1310_16389} {RNA815_7096.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_53160

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.306	2.485	0.38912	1.00000
RegionR2	-0.47	2.485	0.52168	0.89579
RegionR3	0.081	2.485	0.87952	1.00000
RegionR4	0.999	2.485	0.12543	0.35716
RegionR5	0.053	2.485	0.91429	1.00000
RegionR6	0.312	2.485	0.58914	1.00000
RegionR7	-0.008	2.485	0.99897	1.00000
RegionR8	-2.273	2.485	0.13258	0.66696

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.825	2.485	0.13022	0.86261
RegenerationR2	-0.082	2.485	0.87696	1.00000
RegenerationR3	-0.644	2.485	0.27186	0.70589
RegenerationR4	-1.632	2.485	0.00639	0.11505
RegenerationR5	0.027	2.485	0.95779	1.00000
RegenerationR6	-1.124	2.485	0.07623	0.34512
RegenerationBL	-0.151	2.485	0.90246	1.00000
RegenerationTP	0.753	2.485	0.50676	0.90445

Genes with expression patterns similar to MligTC455_53160

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53160	190	3.95	Mlig455_060816	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060816 {REF} {Length: 1724} {NoTransDecoderORF} {RNA1509_35107} {RNA1310_16389} {RNA815_7096.1}
2.	MligTC455_53159	334	6.96	Mlig455_060787	Neo: Int S/G2/M Age: -	KCTD9	3.34	-	-	0.961	0.732	0.730	0.917	Mlig455_060787 {REF} {Length: 4157} {TRANSSPLICED} {Pfam: Pentapeptide repeats (8 copies) [PF00805.24, score=118.5]; BTB/POZ domain [PF02214.24, score=71.3]; Pentapeptide repeats (9 copies) [PF13599.8, score=53.5]; Pentapeptide repeats (9 copies) [PF13576.8, score=52.1]} {Human: ENSG00000104756, KCTD9, potassium channel tetramerization domain containing 9, [RH, Score=278, Expect=3e-91]} {Mouse: ENSMUSG00000034327, Kctd9, potassium channel tetramerisation domain containing 9, [RH, Score=278, Expect=2e-91]} {Dmel: FBgn0037244, CG14647, [RH, Score=231, Expect=6e-74]} {Celegans: WBGene00016871, inso-1, INSOmniac (Drosophila sleep affecting) homolog, [Score=94.0, Expect=3e-22]} {Smed: dd_Smed_v6_1496_0_1, dd_Smed_v6_1496_0_1, [Score=94.0, Expect=6e-23]} {RNA1509_27249, RNA1509_35107, RNA1509_41051} {RNA1310_16389, RNA1509_27249, RNA1509_35107, RNA1509_41051} {RNA1509_27249, RNA1509_35107, RNA1509_41051, RNA815_9724}
3.	MligTC455_48436	268	5.58	Mlig455_022258	Neo: - Age: logFC(26M/2M)=0.565	TRAF3	1.894	-	-	-	0.934	-	0.960	Mlig455_022258 {REF} {Length: 3983} {TRANSSPLICED} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=132, Expect=3e-35]; ENSG00000127191, TRAF2, TNF receptor associated factor 2, [Score=130, Expect=3e-34]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=134, Expect=8e-36]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=132, Expect=4e-35]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=109, Expect=6e-27]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=80.5, Expect=5e-17]} {Smed: dd_Smed_v6_4368_0_1, dd_Smed_v6_4368_0_1, [Score=103, Expect=3e-25]} {RNA1509_37270} {RNA1310_8222} {RNA815_6745.1}
4.	MligTC455_38145	319	6.64	Mlig455_027088	Neo: - Age: -		1.7	-	-	0.955	-	-	0.745	Mlig455_027088 {REF} {Length: 749} {NoTransDecoderORF} {RNA1509_26189} {RNA1310_61517} {RNA815_34488}
5.	MligTC455_35087	554	11.54	Mlig455_006892	Neo: - Age: -		0.984	-	-	0.984	-	-	-	Mlig455_006892 {REF} {Length: 3686} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.4]; C2H2-type zinc finger [PF13894.8, score=50.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.0]; Zinc-finger of C2H2 type [PF12874.9, score=19.0]} {Mouse: ENSMUSG00000025602, Zfp202, zinc finger protein 202, [Score=53.9, Expect=2e-07]} {Dmel: FBgn0030240, CG2202, [Score=51.6, Expect=7e-07]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=52.4, Expect=3e-07]} {RNA1509_40803} {RNA1310_19402.1} {RNA815_13440}
6.	MligTC455_16591	1447	30.14	Mlig455_062918, Mlig455_062920	Neo: Int S/G2/M Age: - Region-enriched R1: 2.714/0.00863		0.97	-	-	0.970	-	-	-	Mlig455_062918 {REF} {Length: 1371} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal subunit [PF10244.11, score=73.4]} {Mouse: ENSMUSG00000030335, Mrpl51, mitochondrial ribosomal protein L51, [RH, Score=56.6, Expect=4e-10]} {Dmel: FBgn0032053, mRpL51, mitochondrial ribosomal protein L51, [RH, Score=57.0, Expect=4e-10]} {Celegans: WBGene00011740, mrpl-51, 39S ribosomal protein L51, mitochondrial, [RH, Score=55.8, Expect=1e-09]} {Smed: dd_Smed_v6_5659_0_1, dd_Smed_v6_5659_0_1, [RH, Score=84.3, Expect=2e-20]} {RNA1509_22332, RNA1509_26822} {RNA1310_24127, RNA1509_22332, RNA1509_26822} {RNA1509_22332, RNA1509_26822, RNA815_17856} Mlig455_062920 {REF} {Length: 1492} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal subunit [PF10244.11, score=73.4]} {Mouse: ENSMUSG00000030335, Mrpl51, mitochondrial ribosomal protein L51, [RH, Score=56.2, Expect=4e-10]} {Dmel: FBgn0032053, mRpL51, mitochondrial ribosomal protein L51, [RH, Score=57.0, Expect=4e-10]} {Celegans: WBGene00011740, mrpl-51, 39S ribosomal protein L51, mitochondrial, [RH, Score=55.8, Expect=1e-09]} {Smed: dd_Smed_v6_5659_0_1, dd_Smed_v6_5659_0_1, [RH, Score=84.3, Expect=2e-20]} {RNA1509_25815, RNA1509_26822, RNA1509_36945} {RNA1310_24127, RNA1509_25815, RNA1509_36945} {RNA1509_25815, RNA1509_36945, RNA815_17856}
7.	MligTC455_25034	895	18.65	Mlig455_007748	Neo: - Age: -		0.97	-	-	0.970	-	-	-	Mlig455_007748 {REF} {Length: 2518} {TRANSSPLICED} {Smed: dd_Smed_v6_7269_0_1, dd_Smed_v6_7269_0_1, [Score=62.8, Expect=3e-10]} {RNA1509_32336} {RNA1310_6848.1} {RNA815_13828}
8.	MligTC455_28690	336	7	Mlig455_001122	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.888	SLC5A8	0.97	-	-	0.970	-	-	-	Mlig455_001122 {REF} {Length: 3975} {Pfam: Sodium:solute symporter family [PF00474.19, score=114.8]} {Human: ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=367, Expect=1e-117]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=367, Expect=1e-117]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=360, Expect=3e-115]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=346, Expect=2e-109]} {Dmel: FBgn0250757, CG42235, [RH, Score=309, Expect=9e-95]} {Celegans: WBGene00014092, ZK822.5, [Score=213, Expect=2e-60]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=321, Expect=1e-100]} {RNA1509_12386} {RNA1310_8136.1} {RNA815_2751}
9.	MligTC455_15494	299	6.23	Mlig455_003802	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_003802 {REF} {Length: 2576} {RNA1509_23541} {RNA1310_23341.1} {RNA815_11967.1}
10.	MligTC455_04446	242	5.05	Mlig455_060896	Neo: - Age: -		0.96	-	-	0.960	-	-	-	Mlig455_060896 {REF} {Length: 368} {NoTransDecoderORF} {RNA1310_146995}
11.	MligTC455_22756	263	5.48	Mlig455_002661	Neo: - Age: logFC(26M/2M)=0.225		0.958	-	-	-	-	-	0.958	Mlig455_002661 {REF} {Length: 3391} {TRANSSPLICED} {RNA1509_20135} {RNA1310_8897.1} {RNA815_3545}
12.	MligTC455_22096	441	9.19	Mlig455_036351	Neo: - Age: -	FOXK2	0.957	-	-	0.957	-	-	-	Mlig455_036351 {REF} {Length: 3114} {Pfam: Forkhead domain [PF00250.20, score=119.9]; FHA domain [PF00498.28, score=33.7]} {Human: ENSG00000141568, FOXK2, forkhead box K2, [RH, Score=223, Expect=9e-65]} {Mouse: ENSMUSG00000039275, Foxk2, forkhead box K2, [RH, Score=224, Expect=2e-65]} {Dmel: FBgn0036134, FoxK, Forkhead box K, [RH, Score=140, Expect=3e-35]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=110, Expect=3e-27]} {Smed: dd_Smed_v6_4500_0_1, dd_Smed_v6_4500_0_1, [RH, Score=155, Expect=3e-40]} {RNA1509_44154} {RNA1310_2461} {RNA815_11037}
13.	MligTC455_06227	228	4.75	Mlig455_036666, Mlig455_036679	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_036666 {REF} {Length: 780} {RNA1310_112949} Mlig455_036679 {REF} {Length: 4100} {RNA1310_79588}
14.	MligTC455_50173	1334	27.8	Mlig455_025822, Mlig455_067624	Neo: Int S/G2/M Age: -	UPF1	0.956	-	-	0.956	-	-	-	Mlig455_025822 {REF} {Length: 4508} {Pfam: RNA helicase (UPF2 interacting domain) [PF09416.12, score=240.4]; AAA domain [PF13087.8, score=203.4]; AAA domain [PF13086.8, score=165.9]; RNA helicase UPF1, 1B domain [PF18141.3, score=109.2]; AAA domain [PF13604.8, score=46.4]; AAA domain [PF13245.8, score=40.9]; Type III restriction enzyme, res subunit [PF04851.17, score=25.2]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=21.8]; Helicase [PF05127.16, score=19.2]} {Human: ENSG00000005007, UPF1, UPF1, RNA helicase and ATPase, [RH, Score=1410, Expect=0.0]} {Mouse: ENSMUSG00000058301, Upf1, UPF1 regulator of nonsense transcripts homolog (yeast), [RH, Score=1410, Expect=0.0]} {Dmel: FBgn0030354, Upf1, [RH, Score=1241, Expect=0.0]} {Celegans: WBGene00004880, smg-2, Regulator of nonsense transcripts 1, [RH, Score=975, Expect=0.0]} {Smed: dd_Smed_v6_5185_0_1, dd_Smed_v6_5185_0_1, [RH, Score=1377, Expect=0.0]} {RNA1509_19309, RNA1509_2090} {RNA1310_1431, RNA1509_19309} {RNA1509_19309, RNA815_940} Mlig455_067624 {REF} {Length: 5566} {Pfam: AAA domain [PF13087.8, score=204.2]; AAA domain [PF13086.8, score=123.5]; AAA domain [PF13604.8, score=34.7]; AAA domain [PF13245.8, score=26.3]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=19.1]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=18.9]} {Human: ENSG00000005007, UPF1, UPF1, RNA helicase and ATPase, [Score=622, Expect=0.0]} {Mouse: ENSMUSG00000058301, Upf1, UPF1 regulator of nonsense transcripts homolog (yeast), [Score=621, Expect=0.0]} {Dmel: FBgn0030354, Upf1, [Score=534, Expect=1e-175]} {Celegans: WBGene00004880, smg-2, Regulator of nonsense transcripts 1, [Score=449, Expect=2e-144]} {Smed: dd_Smed_v6_5185_0_1, dd_Smed_v6_5185_0_1, [Score=592, Expect=0.0]} {RNA1509_2090} {RNA1310_1431} {RNA815_940}
15.	MligTC455_28105	262	5.46	Mlig455_038527	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_038527 {REF} {Length: 3543} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_9245.1} {RNA815_15623}
16.	MligTC455_50632	730	15.2	Mlig455_035453	Neo: - Age: logFC(26M/2M)=-1.037 Region-enriched R4: 5.727/0.00000		0.954	-	-	0.954	-	-	-	Mlig455_035453 {REF} {Length: 1360} {RNA1509_18596, RNA1509_40633} {RNA1310_43815, RNA1509_18596, RNA1509_40633} {RNA1509_18596, RNA1509_40633, RNA815_23662.3}
17.	MligTC455_26507	103	2.14	Mlig455_012440, Mlig455_012482	Neo: - Age: Down-Down-Down		0.952	-	-	0.952	-	-	-	Mlig455_012440 {REF} {Length: 382} {TRANSSPLICED} {RNA1509_39210} {RNA1310_67854.2} {RNA815_3012.1} Mlig455_012482 {REF} {Length: 1107} {TRANSSPLICED} {Pfam: Translation machinery associated TMA7 [PF09072.12, score=67.7]} {Smed: dd_Smed_v6_563_0_1, dd_Smed_v6_563_0_1, [RH, Score=66.2, Expect=1e-15]} {RNA1509_14584} {RNA1310_14574.2} {RNA815_22175.1}
18.	MligTC455_44592	1049	21.86	Mlig455_057747	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_057747 {REF} {Length: 4064} {RNA1509_59863} {RNA1310_10688} {RNA815_511.1}
19.	MligTC455_23118	897	18.68	Mlig455_053548	Neo: - Age: - Region-enriched R4: 1.042/0.02573	DDX17	0.951	-	-	0.951	-	-	-	Mlig455_053548 {REF} {Length: 2791} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=167.9]; Helicase conserved C-terminal domain [PF00271.33, score=100.9]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=514, Expect=3e-174]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=504, Expect=6e-172]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=515, Expect=7e-176]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=503, Expect=1e-171]} {Dmel: FBgn0035720, CG10077, [RH, Score=494, Expect=8e-166]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [Score=444, Expect=7e-150]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=523, Expect=5e-180]} {RNA1509_39281, RNA1509_42303, RNA1509_8347} {RNA1310_6636.1, RNA1509_39281, RNA1509_42303} {RNA1509_39281, RNA1509_42303, RNA815_4842.1}
20.	MligTC455_50615	204	4.25	Mlig455_056431	Neo: - Age: -	GRK3	0.95	-	-	-	-	0.950	-	Mlig455_056431 {REF} {Length: 4903} {Pfam: Protein kinase domain [PF00069.27, score=230.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=94.3]; Regulator of G protein signaling domain [PF00615.21, score=52.7]} {Human: ENSG00000100077, GRK3, G protein-coupled receptor kinase 3, [RH, Score=914, Expect=0.0]; ENSG00000173020, GRK2, G protein-coupled receptor kinase 2, [RH, Score=908, Expect=0.0]} {Mouse: ENSMUSG00000024858, Grk2, G protein-coupled receptor kinase 2, [RH, Score=908, Expect=0.0]; ENSMUSG00000042249, Grk3, G protein-coupled receptor kinase 3, [RH, Score=906, Expect=0.0]} {Dmel: FBgn0260798, Gprk1, G protein-coupled receptor kinase 1, [RH, Score=907, Expect=0.0]} {Celegans: WBGene00001709, grk-2, G protein-coupled receptor kinase 2, [RH, Score=887, Expect=0.0]} {Smed: dd_Smed_v6_6480_0_1, dd_Smed_v6_6480_0_1, [RH, Score=1042, Expect=0.0]} {RNA1509_18859, RNA1509_46485} {RNA1310_7105, RNA1509_18859, RNA1509_46485} {RNA1509_18859, RNA1509_46485, RNA815_2886}