TomoSeq data search

Data search

Results for MligTC455_53209

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53209

648

13.49

Mlig455_053550

Neo: -

Age: Down-Up-Up

NIF3L1

Mlig455_053550 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: NIF3 (NGG1p interacting factor 3) [PF01784.20, score=108.9]} {Human: ENSG00000196290, NIF3L1, NGG1 interacting factor 3 like 1, [RH, Score=115, Expect=2e-31]} {Mouse: ENSMUSG00000026036, Nif3l1, Ngg1 interacting factor 3-like 1 (S. pombe), [RH, Score=108, Expect=2e-28]} {Dmel: FBgn0014092, CG4278, [Score=130, Expect=3e-37]} {Smed: dd_Smed_v6_2860_0_1, dd_Smed_v6_2860_0_1, [Score=108, Expect=5e-29]} {RNA1509_38804} {RNA1310_1821.1} {RNA815_6672.1}

Cumulative graph for MligTC455_53209

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.009	3.945	0.99281	1.00000
RegionR2	-0.486	3.945	0.28369	0.67036
RegionR3	-0.151	3.945	0.68539	1.00000
RegionR4	0.756	3.945	0.05624	0.20883
RegionR5	0.425	3.945	0.18794	0.47010
RegionR6	-0.225	3.945	0.57356	1.00000
RegionR7	-0.519	3.945	0.36943	1.00000
RegionR8	0.21	3.945	0.74815	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.936	3.945	0.58929	1.00000
RegenerationR2	0.555	3.945	0.11949	0.53765
RegenerationR3	0.582	3.945	0.13566	0.56001
RegenerationR4	0.603	3.945	0.10452	0.49855
RegenerationR5	0.196	3.945	0.56338	0.89316
RegenerationR6	0.429	3.945	0.30750	0.65594
RegenerationBL	1.034	3.945	0.02578	0.17670
RegenerationTP	0.892	3.945	0.09263	0.47795

Genes with expression patterns similar to MligTC455_53209

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53209	648	13.49	Mlig455_053550	Neo: - Age: Down-Up-Up	NIF3L1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053550 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: NIF3 (NGG1p interacting factor 3) [PF01784.20, score=108.9]} {Human: ENSG00000196290, NIF3L1, NGG1 interacting factor 3 like 1, [RH, Score=115, Expect=2e-31]} {Mouse: ENSMUSG00000026036, Nif3l1, Ngg1 interacting factor 3-like 1 (S. pombe), [RH, Score=108, Expect=2e-28]} {Dmel: FBgn0014092, CG4278, [Score=130, Expect=3e-37]} {Smed: dd_Smed_v6_2860_0_1, dd_Smed_v6_2860_0_1, [Score=108, Expect=5e-29]} {RNA1509_38804} {RNA1310_1821.1} {RNA815_6672.1}
2.	MligTC455_05384	663	13.82	Mlig455_037758	Neo: - Age: Up-Down-Up	PRR9	1.823	-	-	-	0.871	-	0.952	Mlig455_037758 {REF} {Length: 5161} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=6e-06]} {Mouse: ENSMUSG00000056270, Prr9, proline rich 9, [Score=45.4, Expect=1e-05]} {RNA1509_24708} {RNA1310_19741.1} {RNA815_7923}
3.	MligTC455_17355	454	9.46	Mlig455_042392	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_042392 {REF} {Length: 1844} {RNA1509_44829, RNA1509_47909} {RNA1310_36451, RNA1509_44829, RNA1509_47909} {RNA1509_44829, RNA1509_47909, RNA815_18418}
4.	MligTC455_47046	629	13.1	Mlig455_051939	Neo: Int S/G2/M Age: - Region-enriched R5: 1.298/0.00457		0.959	-	-	-	-	-	0.959	Mlig455_051939 {REF} {Length: 493} {TRANSSPLICED} {RNA1509_56604} {RNA1310_60152.2, RNA1509_56604} {RNA1509_56604, RNA815_39626}
5.	MligTC455_25118	800	16.66	Mlig455_045721	Neo: Int S/G2/M Age: -	SIL1	0.956	-	-	-	-	-	0.956	Mlig455_045721 {REF} {Length: 2078} {TRANSSPLICED} {Pfam: Nucleotide exchange factor Fes1 [PF08609.12, score=22.4]} {Human: ENSG00000120725, SIL1, SIL1 nucleotide exchange factor, [RH, Score=191, Expect=1e-54]} {Mouse: ENSMUSG00000024357, Sil1, endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae), [RH, Score=189, Expect=5e-54]} {Dmel: FBgn0039296, CG10420, [RH, Score=131, Expect=3e-33]} {Smed: dd_Smed_v6_5534_0_1, dd_Smed_v6_5534_0_1, [RH, Score=203, Expect=5e-60]} {RNA1509_50296, RNA1509_8971} {RNA1310_12636, RNA1509_50296, RNA1509_8971} {RNA1509_50296, RNA1509_8971, RNA815_4540}
6.	MligTC455_26591	625	13.02	Mlig455_007573	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_007573 {REF} {Length: 3332} {TRANSSPLICED} {RNA1509_20972, RNA1509_34027, RNA1509_39076} {RNA1310_19800, RNA1509_20972, RNA1509_34027, RNA1509_39076} {RNA1509_20972, RNA1509_34027, RNA1509_39076, RNA815_2667.1}
7.	MligTC455_42713	767	15.98	Mlig455_005198	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.661	PIGM	0.951	-	-	0.951	-	-	-	Mlig455_005198 {REF} {Length: 1406} {TRANSSPLICED} {Pfam: Mannosyltransferase (PIG-M) [PF05007.15, score=177.8]; GPI transamidase subunit PIG-U [PF06728.15, score=27.3]} {Human: ENSG00000143315, PIGM, phosphatidylinositol glycan anchor biosynthesis class M, [RH, Score=181, Expect=2e-52]} {Mouse: ENSMUSG00000050229, Pigm, phosphatidylinositol glycan anchor biosynthesis, class M, [RH, Score=178, Expect=1e-51]} {Dmel: FBgn0034649, PIG-M, Phosphatidylinositol glycan anchor biosynthesis class M, [RH, Score=139, Expect=1e-36]} {Celegans: WBGene00007189, B0491.1, [RH, Score=195, Expect=3e-58]} {Smed: dd_Smed_v6_13168_0_1, dd_Smed_v6_13168_0_1, [RH, Score=214, Expect=8e-66]} {RNA1509_40700} {RNA1310_25088} {RNA815_10384}
8.	MligTC455_27208	670	13.95	Mlig455_042079	Neo: - Age: Down-Up-Down Region-enriched R5: 1.323/0.00029		0.95	-	-	-	-	-	0.950	Mlig455_042079 {REF} {Length: 1743} {NoTransDecoderORF} {RNA1509_19104} {RNA1310_30704} {RNA815_17804}
9.	MligTC455_28049	504	10.5	Mlig455_026885	Neo: - Age: Down-Down-Up	NOC2L	0.95	-	-	-	-	0.950	-	Mlig455_026885 {REF} {Length: 1928} {TRANSSPLICED} {Pfam: Noc2p family [PF03715.15, score=128.5]} {Human: ENSG00000188976, NOC2L, NOC2 like nucleolar associated transcriptional repressor, [Score=197, Expect=8e-54]} {Mouse: ENSMUSG00000095567, Noc2l, NOC2 like nucleolar associated transcriptional repressor, [Score=184, Expect=3e-50]} {Dmel: FBgn0032925, CG9246, [Score=139, Expect=4e-34]} {Celegans: WBGene00007413, pro-2, Nucleolar complex protein 2 homolog, [Score=105, Expect=1e-23]} {Smed: dd_Smed_v6_6278_0_1, dd_Smed_v6_6278_0_1, [Score=86.7, Expect=4e-18]} {RNA1509_8413} {RNA1310_14791} {RNA815_5447}

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