Data search
Results for MligTC455_27208
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27208 | 670 | 13.95 | Mlig455_042079 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.323/0.00029 |
Mlig455_042079 {REF} {Length: 1743} {NoTransDecoderORF} {RNA1509_19104} {RNA1310_30704} {RNA815_17804} |
Cumulative graph for MligTC455_27208
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.043 | 4.046 | 0.97108 | 1.00000 | |
| RegionR2 | -0.571 | 4.046 | 0.20905 | 0.57226 | |
| RegionR3 | 0.188 | 4.046 | 0.59872 | 1.00000 | |
| RegionR4 | 0.748 | 4.046 | 0.09321 | 0.29339 | |
| RegionR5 | 1.323 | 4.046 | 0.00001 | 0.00029 | |
| RegionR6 | -0.217 | 4.046 | 0.58663 | 1.00000 | |
| RegionR7 | -0.642 | 4.046 | 0.26264 | 0.89082 | |
| RegionR8 | -0.785 | 4.046 | 0.27942 | 0.90491 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.095 | 4.046 | 0.95611 | 1.00000 | |
| RegenerationR2 | 0.257 | 4.046 | 0.45564 | 0.85027 | |
| RegenerationR3 | -0.179 | 4.046 | 0.63140 | 0.92074 | |
| RegenerationR4 | 0.207 | 4.046 | 0.59778 | 0.91256 | |
| RegenerationR5 | -0.417 | 4.046 | 0.19646 | 0.62873 | |
| RegenerationR6 | 0.737 | 4.046 | 0.06264 | 0.31425 | |
| RegenerationBL | 0.899 | 4.046 | 0.07300 | 0.31513 | |
| RegenerationTP | 0.864 | 4.046 | 0.13418 | 0.55035 |
Genes with expression patterns similar to MligTC455_27208
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27208 | 670 | 13.95 | Mlig455_042079 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.323/0.00029 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042079 {REF} {Length: 1743} {NoTransDecoderORF} {RNA1509_19104} {RNA1310_30704} {RNA815_17804} | |
| 2. | MligTC455_27209 | 850 | 17.7 | Mlig455_042304 | Neo: - Age: - Region-enriched R4: 1.246/0.01505 |
CSDE1 | 3.821 | 0.878 | - | 0.977 | 0.983 | - | 0.983 | Mlig455_042304 {REF} {Length: 6022} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=36.5]} {Human: ENSG00000009307, CSDE1, cold shock domain containing E1, [Score=127, Expect=1e-31]} {Mouse: ENSMUSG00000068823, Csde1, cold shock domain containing E1, RNA binding, [Score=127, Expect=8e-32]} {Dmel: FBgn0263352, Unr, Upstream of N-ras, [Score=117, Expect=2e-28]} {Smed: dd_Smed_v6_598_0_1, dd_Smed_v6_598_0_1, [Score=127, Expect=9e-32]} {RNA1509_19104, RNA1509_34863} {RNA1310_30704, RNA1509_19104, RNA1509_34863} {RNA1509_19104, RNA1509_34863, RNA815_2002} |
| 3. | MligTC455_34803 | 655 | 13.65 | Mlig455_030101 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.174/0.04108 |
2.444 | - | - | - | 0.750 | 0.739 | 0.955 | Mlig455_030101 {REF} {Length: 808} {TRANSSPLICED} {Pfam: Phytochelatin synthase [PF05023.16, score=81.9]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [Score=62.4, Expect=2e-11]} {RNA1509_13809, RNA1509_14240} {RNA1310_44237.1, RNA1509_13809, RNA1509_14240} {RNA1509_13809, RNA1509_14240, RNA815_21943} | |
| 4. | MligTC455_38244 | 734 | 15.29 | Mlig455_022877 | Neo: - Age: Down-Up-Down |
TRAPPC3 | 1.694 | - | - | 0.734 | - | - | 0.960 | Mlig455_022877 {REF} {Length: 1976} {TRANSSPLICED} {Pfam: Transport protein particle (TRAPP) component [PF04051.18, score=107.6]} {Human: ENSG00000054116, TRAPPC3, trafficking protein particle complex 3, [RH, Score=234, Expect=6e-79]} {Mouse: ENSMUSG00000028847, Trappc3, trafficking protein particle complex 3, [RH, Score=235, Expect=3e-79]} {Dmel: FBgn0260859, Bet3, Blocked early in transport 3, [RH, Score=207, Expect=3e-68]} {Celegans: WBGene00014222, trpp-3, Trafficking protein particle complex subunit 3 homolog, [Score=143, Expect=2e-43]} {Smed: dd_Smed_v6_4848_0_1, dd_Smed_v6_4848_0_1, [RH, Score=219, Expect=4e-73]} {RNA1509_14723} {RNA1310_13044} {RNA815_24609} |
| 5. | MligTC455_18302 | 353 | 7.35 | Mlig455_040458 | Neo: - Age: Up-Down-Down |
MED1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_040458 {REF} {Length: 6029} {TRANSSPLICED} {Pfam: Mediator of RNA polymerase II transcription subunit 1 [PF10744.11, score=26.6]; M-phase phosphoprotein 6 [PF10175.11, score=20.1]} {Human: ENSG00000125686, MED1, mediator complex subunit 1, [RH, Score=102, Expect=4e-21]} {RNA1509_4190} {RNA1310_1177.1, RNA1509_4190} {RNA1509_4190, RNA815_8164} |
| 6. | MligTC455_35734 | 1207 | 25.15 | Mlig455_016267 | Neo: - Age: - |
PBX1 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_016267 {REF} {Length: 2584} {TRANSSPLICED} {Pfam: PBC domain [PF03792.15, score=246.8]; Homeodomain [PF00046.31, score=70.3]; Homeobox KN domain [PF05920.13, score=55.9]} {Human: ENSG00000185630, PBX1, PBX homeobox 1, [RH, Score=398, Expect=2e-139]; ENSG00000167081, PBX3, PBX homeobox 3, [RH, Score=395, Expect=9e-137]} {Mouse: ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [RH, Score=398, Expect=2e-139]; ENSMUSG00000038718, Pbx3, pre B cell leukemia homeobox 3, [RH, Score=395, Expect=5e-137]} {Dmel: FBgn0000611, exd, extradenticle, [RH, Score=401, Expect=3e-140]} {Celegans: WBGene00000443, ceh-20, Homeobox protein ceh-20, [RH, Score=355, Expect=1e-122]} {Smed: dd_Smed_v6_3098_0_1, dd_Smed_v6_3098_0_1, [RH, Score=370, Expect=6e-128]} {RNA1509_47841, RNA1509_52495, RNA1509_8058} {RNA1310_11055, RNA1509_47841, RNA1509_52495, RNA1509_8058} {RNA1509_47841, RNA1509_52495, RNA1509_8058, RNA815_18271} |
| 7. | MligTC455_34711 | 1445 | 30.11 | Mlig455_051634, Mlig455_061998 | Neo: - Age: - Region-enriched R4: 1.537/0.00193 |
SDHAF3 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_051634 {REF} {Length: 2779} {Pfam: Complex1_LYR-like [PF13233.8, score=62.5]; Complex 1 protein (LYR family) [PF05347.17, score=38.9]} {Human: ENSG00000196636, SDHAF3, succinate dehydrogenase complex assembly factor 3, [RH, Score=83.2, Expect=8e-21]} {Mouse: ENSMUSG00000042505, Sdhaf3, succinate dehydrogenase complex assembly factor 3, [RH, Score=87.0, Expect=2e-22]} {Dmel: FBgn0038437, Sdhaf3, Succinate dehydrogenase assembly factor 3, [RH, Score=88.2, Expect=4e-23]} {Celegans: WBGene00009139, F25H9.7, [RH, Score=57.4, Expect=4e-11]} {Smed: dd_Smed_v6_8316_0_1, dd_Smed_v6_8316_0_1, [RH, Score=84.0, Expect=1e-21]} {RNA1509_39733} {RNA1310_36694} {RNA815_22183.1} Mlig455_061998 {REF} {Length: 3730} {Pfam: Complex1_LYR-like [PF13233.8, score=62.0]; Complex 1 protein (LYR family) [PF05347.17, score=37.7]} {Human: ENSG00000196636, SDHAF3, succinate dehydrogenase complex assembly factor 3, [RH, Score=83.2, Expect=8e-21]} {Mouse: ENSMUSG00000042505, Sdhaf3, succinate dehydrogenase complex assembly factor 3, [RH, Score=86.7, Expect=3e-22]} {Dmel: FBgn0038437, Sdhaf3, Succinate dehydrogenase assembly factor 3, [RH, Score=88.2, Expect=4e-23]} {Celegans: WBGene00009139, F25H9.7, [RH, Score=57.4, Expect=3e-11]} {Smed: dd_Smed_v6_8316_0_1, dd_Smed_v6_8316_0_1, [RH, Score=84.0, Expect=1e-21]} {RNA1509_39733} {RNA1310_36694} {RNA815_22183.1} |
| 8. | MligTC455_30959 | 5144 | 107.16 | Mlig455_053739 | Neo: Int S/G2/M Age: - |
PSMD6 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_053739 {REF} {Length: 1825} {Pfam: 26S proteasome subunit RPN7 [PF10602.11, score=190.6]; PCI domain [PF01399.29, score=60.5]} {Human: ENSG00000163636, PSMD6, proteasome 26S subunit, non-ATPase 6, [RH, Score=493, Expect=9e-175]} {Mouse: ENSMUSG00000021737, Psmd6, proteasome (prosome, macropain) 26S subunit, non-ATPase, 6, [RH, Score=492, Expect=2e-174]} {Dmel: FBgn0028688, Rpn7, Regulatory particle non-ATPase 7, [RH, Score=486, Expect=4e-172]} {Celegans: WBGene00004463, rpn-7, 26S proteasome non-ATPase regulatory subunit 6, [RH, Score=351, Expect=8e-119]} {Smed: dd_Smed_v6_3986_0_1, dd_Smed_v6_3986_0_1, [RH, Score=495, Expect=8e-176]} {RNA1509_755} {RNA1310_16981, RNA1509_755} {RNA1509_755, RNA815_6491} |
| 9. | MligTC455_44854 | 1026 | 21.38 | Mlig455_021934 | Neo: - Age: - Region-enriched R5: 1.051/0.00690 |
RNF217 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_021934 {REF} {Length: 2682} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=56.5]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=172, Expect=6e-46]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=170, Expect=1e-45]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=72.8, Expect=3e-13]} {Celegans: WBGene00013270, Y57A10A.31, [Score=78.6, Expect=8e-15]} {Smed: dd_Smed_v6_7110_0_1, dd_Smed_v6_7110_0_1, [Score=135, Expect=2e-33]} {RNA1509_38984, RNA1509_4132} {RNA1310_7549, RNA1509_38984} {RNA1509_38984, RNA815_2398.1} |
| 10. | MligTC455_53209 | 648 | 13.49 | Mlig455_053550 | Neo: - Age: Down-Up-Up |
NIF3L1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_053550 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: NIF3 (NGG1p interacting factor 3) [PF01784.20, score=108.9]} {Human: ENSG00000196290, NIF3L1, NGG1 interacting factor 3 like 1, [RH, Score=115, Expect=2e-31]} {Mouse: ENSMUSG00000026036, Nif3l1, Ngg1 interacting factor 3-like 1 (S. pombe), [RH, Score=108, Expect=2e-28]} {Dmel: FBgn0014092, CG4278, [Score=130, Expect=3e-37]} {Smed: dd_Smed_v6_2860_0_1, dd_Smed_v6_2860_0_1, [Score=108, Expect=5e-29]} {RNA1509_38804} {RNA1310_1821.1} {RNA815_6672.1} |
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