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Results for MligTC455_53250

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53250 122 2.54 Mlig455_067502

Neo: -

Age: -

WBP4 Mlig455_067502 {REF} {Length: 1131} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=42.4]; U1 zinc finger [PF06220.14, score=41.5]} {Human: ENSG00000120688, WBP4, WW domain binding protein 4, [RH, Score=86.3, Expect=1e-18]} {Mouse: ENSMUSG00000022023, Wbp4, WW domain binding protein 4, [RH, Score=89.4, Expect=6e-20]} {Dmel: FBgn0031287, CG4291, [RH, Score=89.4, Expect=3e-20]} {Smed: dd_Smed_v6_10030_0_6, dd_Smed_v6_10030_0_6, [RH, Score=85.9, Expect=4e-20]} {RNA1509_46002} {RNA1310_29789, RNA1509_46002} {RNA1509_46002, RNA815_12245}

Cumulative graph for MligTC455_53250

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 3.214 1.863 0.10639 0.68346
RegionR2 0.257 1.863 0.53436 0.90475
RegionR3 -3.414 1.863 0.99967 1.00000
RegionR4 2.102 1.863 0.04486 0.17912
RegionR5 1.154 1.863 0.17768 0.45261
RegionR6 -0.629 1.863 0.81621 1.00000
RegionR7 0.744 1.863 0.44884 1.00000
RegionR8 -3.426 1.863 0.99954 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.802 1.863 0.51411 1.00000
RegenerationR2 0.528 1.863 0.61016 0.91974
RegenerationR3 4.289 1.863 0.00978 0.18081
RegenerationR4 0.14 1.863 0.90479 1.00000
RegenerationR5 1.611 1.863 0.12777 0.53218
RegenerationR6 2.914 1.863 0.02732 0.20678
RegenerationBL 2.65 1.863 0.11263 0.39631
RegenerationTP 2.542 1.863 0.26358 0.71177


Genes with expression patterns similar to MligTC455_53250

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53250 122 2.54 Mlig455_067502

Neo: -

Age: -

WBP4 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_067502 {REF} {Length: 1131} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=42.4]; U1 zinc finger [PF06220.14, score=41.5]} {Human: ENSG00000120688, WBP4, WW domain binding protein 4, [RH, Score=86.3, Expect=1e-18]} {Mouse: ENSMUSG00000022023, Wbp4, WW domain binding protein 4, [RH, Score=89.4, Expect=6e-20]} {Dmel: FBgn0031287, CG4291, [RH, Score=89.4, Expect=3e-20]} {Smed: dd_Smed_v6_10030_0_6, dd_Smed_v6_10030_0_6, [RH, Score=85.9, Expect=4e-20]} {RNA1509_46002} {RNA1310_29789, RNA1509_46002} {RNA1509_46002, RNA815_12245}
2. MligTC455_45568 73 1.52 Mlig455_045036

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R5: 2.439/0.00238

PRDX2 1.868 0.914 - - - - 0.954 Mlig455_045036 {REF} {Length: 1089} {TRANSSPLICED} {Pfam: AhpC/TSA family [PF00578.23, score=126.9]; Redoxin [PF08534.12, score=59.0]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=52.3]} {Human: ENSG00000167815, PRDX2, peroxiredoxin 2, [RH, Score=271, Expect=8e-92]} {Mouse: ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [RH, Score=277, Expect=2e-94]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [Score=268, Expect=4e-91]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=262, Expect=9e-89]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=284, Expect=1e-97]} {RNA1509_41676} {RNA1310_17406, RNA1509_41676} {RNA1509_41676, RNA815_10619}
3. MligTC455_53545 764 15.92 Mlig455_025899

Neo: -

Age: logFC(26M/2M)=0.796

HELT 0.982 - - - 0.982 - - Mlig455_025899 {REF} {Length: 2919} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=43.8]} {Human: ENSG00000187821, HELT, helt bHLH transcription factor, [Score=68.2, Expect=1e-12]} {Mouse: ENSMUSG00000047171, Helt, helt bHLH transcription factor, [Score=68.6, Expect=6e-13]} {Dmel: FBgn0027788, Hey, Hairy/E(spl)-related with YRPW motif, [Score=66.2, Expect=1e-11]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=60.5, Expect=3e-10]} {RNA1509_12426, RNA1509_49122} {RNA1310_18992.1, RNA1509_49122} {RNA1509_49122, RNA815_16883}
4. MligTC455_20541 3396 70.75 Mlig455_003228

Neo: -

Age: logFC(26M/2M)=0.463

Region-enriched R8: 1.314/0.00013

KY 0.978 - - - 0.978 - - Mlig455_003228 {REF} {Length: 15524} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=22.1]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=84.7, Expect=2e-15]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=78.2, Expect=2e-13]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=105, Expect=8e-22]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=96.3, Expect=3e-19]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=301, Expect=4e-84]} {RNA1509_704} {RNA1310_3180} {RNA815_1159.1}
5. MligTC455_33276 842 17.54 Mlig455_028689, Mlig455_028712

Neo: Germline

Age: -

Region-enriched R5: 2.799/0.00001
Region-enriched R4: 2.129/0.00993

HSPA4 0.977 - - - 0.977 - -

Mlig455_028689 {REF} {Length: 1889} {TRANSSPLICED} {RNA1509_32584} {RNA1310_6293} {RNA815_1599.1}

Mlig455_028712 {REF} {Length: 3052} {Pfam: Hsp70 protein [PF00012.22, score=398.1]} {Human: ENSG00000170606, HSPA4, heat shock protein family A (Hsp70) member 4, [Score=494, Expect=1e-163]; ENSG00000164070, HSPA4L, heat shock protein family A (Hsp70) member 4 like, [Score=481, Expect=7e-159]} {Mouse: ENSMUSG00000020361, Hspa4, heat shock protein 4, [Score=498, Expect=1e-165]; ENSMUSG00000115951, Hspa4l, heat shock protein 4 like, [Score=492, Expect=4e-163]; ENSMUSG00000025757, Hspa4l, heat shock protein 4 like, [Score=492, Expect=4e-163]} {Dmel: FBgn0026418, Hsc70Cb, [Score=391, Expect=5e-125]} {Celegans: WBGene00016250, hsp-110, Heat shock protein 110, [Score=385, Expect=4e-123]} {Smed: dd_Smed_v6_1087_0_1, dd_Smed_v6_1087_0_1, [Score=450, Expect=9e-148]} {RNA1509_32584, RNA1509_53074, RNA1509_9689} {RNA1310_5361.1, RNA1509_32584, RNA1509_53074, RNA1509_9689} {RNA1509_32584, RNA1509_53074, RNA1509_9689, RNA815_1599.1}
6. MligTC455_44942 226 4.7 Mlig455_004098

Neo: -

Age: -

PIGA 0.977 - - - 0.977 - - Mlig455_004098 {REF} {Length: 2075} {TRANSSPLICED} {Pfam: PIGA (GPI anchor biosynthesis) [PF08288.14, score=136.1]; Glycosyltransferase Family 4 [PF13439.8, score=107.1]; Glycosyl transferases group 1 [PF00534.22, score=89.4]; Glycosyl transferases group 1 [PF13692.8, score=83.9]; Glycosyl transferase 4-like domain [PF13579.8, score=56.2]} {Human: ENSG00000165195, PIGA, phosphatidylinositol glycan anchor biosynthesis class A, [RH, Score=470, Expect=1e-163]} {Mouse: ENSMUSG00000031381, Piga, phosphatidylinositol glycan anchor biosynthesis, class A, [RH, Score=475, Expect=1e-165]} {Dmel: FBgn0034270, PIG-A, Phosphatidylinositol glycan anchor biosynthesis class A, [RH, Score=383, Expect=1e-129]} {Celegans: WBGene00008431, piga-1, PhosphatidylInositol-Glycan biosynthesis class A protein, [RH, Score=401, Expect=2e-137]} {Smed: dd_Smed_v6_5918_0_1, dd_Smed_v6_5918_0_1, [RH, Score=430, Expect=1e-148]} {RNA1509_59793} {RNA1310_21220.1} {RNA815_5464}
7. MligTC455_47738 719 14.98 Mlig455_033682

Neo: -

Age: Down-Up-Up

0.971 - - - 0.971 - - Mlig455_033682 {REF} {Length: 2679} {TRANSSPLICED} {Pfam: Sleepless protein [PF17064.7, score=32.6]} {Smed: dd_Smed_v6_3412_0_1, dd_Smed_v6_3412_0_1, [Score=141, Expect=3e-44]} {RNA1509_28967} {RNA1310_27590} {RNA815_17765}
8. MligTC455_20542 5447 113.47 Mlig455_003023, Mlig455_003318

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.611

Region-enriched R8: 1.173/0.00545

KY 0.97 - - - 0.970 - -

Mlig455_003023 {REF} {Length: 19522} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=22.4]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=79.7, Expect=1e-13]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=77.8, Expect=3e-13]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=103, Expect=4e-21]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=90.5, Expect=2e-17]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=290, Expect=4e-80]} {RNA1509_704} {RNA1310_3180} {RNA815_1159.1}

Mlig455_003318 {REF} {Length: 19222} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=22.9]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=80.5, Expect=7e-14]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=75.5, Expect=2e-12]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=99.8, Expect=5e-20]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=90.9, Expect=1e-17]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=292, Expect=8e-81]} {RNA1509_2987, RNA1509_37803, RNA1509_704} {RNA1310_3180, RNA1509_2987, RNA1509_37803} {RNA1509_2987, RNA1509_37803, RNA815_1159.1}
9. MligTC455_25454 85 1.78 Mlig455_010571

Neo: -

Age: Up-Down-Down

PCDH11Y 0.967 - - - - - 0.967 Mlig455_010571 {REF} {Length: 5203} {Pfam: Cadherin domain [PF00028.19, score=240.3]; Cadherin-like [PF08266.14, score=38.0]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=244, Expect=2e-65]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=244, Expect=2e-65]; ENSG00000156453, PCDH1, protocadherin 1, [Score=237, Expect=2e-63]; ENSG00000184226, PCDH9, protocadherin 9, [Score=232, Expect=5e-62]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=236, Expect=2e-63]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=231, Expect=9e-62]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=228, Expect=5e-60]; ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=226, Expect=6e-61]} {Dmel: FBgn0284247, ds, dachsous, [Score=219, Expect=3e-57]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=160, Expect=3e-39]} {Smed: dd_Smed_v6_13155_0_1, dd_Smed_v6_13155_0_1, [RH, Score=327, Expect=5e-95]} {RNA1509_52197} {RNA1310_19708.1} {RNA815_21665.1}
10. MligTC455_35261 103 2.15 Mlig455_032278

Neo: -

Age: Up-Down-Up

0.967 - - 0.967 - - - Mlig455_032278 {REF} {Length: 7116} {Pfam: Axin beta-catenin binding motif [PF08833.12, score=18.8]} {RNA1509_32997} {RNA1310_5547.1} {RNA815_11709}
11. MligTC455_30919 296 6.16 Mlig455_027919

Neo: -

Age: -

TNN 0.966 - - - 0.966 - - Mlig455_027919 {REF} {Length: 2245} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=79.7]} {Human: ENSG00000120332, TNN, tenascin N, [Score=68.2, Expect=1e-11]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=66.6, Expect=3e-11]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=66.2, Expect=3e-11]; ENSMUSG00000015829, Tnr, tenascin R, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0031804, CG9500, [Score=81.3, Expect=4e-17]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=68.9, Expect=2e-12]} {RNA1509_53291} {RNA1310_21728} {RNA815_9881}
12. MligTC455_35403 638 13.28 Mlig455_065741

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.314

NEBL 0.965 - - - 0.965 - - Mlig455_065741 {REF} {Length: 3515} {Pfam: Nebulin repeat [PF00880.20, score=59.6]; Variant SH3 domain [PF14604.8, score=50.0]; LIM domain [PF00412.24, score=47.2]; SH3 domain [PF00018.30, score=45.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.9]; Variant SH3 domain [PF07653.19, score=19.6]} {Human: ENSG00000078114, NEBL, nebulette, [RH, Score=195, Expect=2e-60]} {Mouse: ENSMUSG00000038366, Lasp1, LIM and SH3 protein 1, [RH, Score=187, Expect=1e-57]} {Dmel: FBgn0063485, Lasp, [RH, Score=190, Expect=6e-55]} {Celegans: WBGene00018367, F42H10.3, LIM and SH3 domain protein F42H10.3, [RH, Score=170, Expect=2e-50]} {Smed: dd_Smed_v6_1218_0_1, dd_Smed_v6_1218_0_1, [RH, Score=119, Expect=3e-32]} {RNA1509_40794} {RNA1310_6041.1, RNA1509_40794} {RNA1509_40794, RNA815_19941}
13. MligTC455_38921 1688 35.17 Mlig455_023977

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.453

MX2 0.964 - - - 0.964 - - Mlig455_023977 {REF} {Length: 3870} {Pfam: Dynamin central region [PF01031.22, score=175.3]; Dynamin family [PF00350.25, score=125.4]; Dynamin GTPase effector domain [PF02212.20, score=47.1]; 50S ribosome-binding GTPase [PF01926.25, score=22.3]; AAA ATPase domain [PF13191.8, score=19.2]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=319, Expect=2e-97]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=307, Expect=8e-94]} {Dmel: FBgn0003392, shi, shibire, [Score=181, Expect=2e-47]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=177, Expect=3e-46]} {Smed: dd_Smed_v6_2583_0_1, dd_Smed_v6_2583_0_1, [Score=194, Expect=3e-52]} {RNA1509_17985, RNA1509_34505, RNA1509_40252} {RNA1310_6542.1, RNA1509_17985, RNA1509_34505, RNA1509_40252} {RNA1509_17985, RNA1509_34505, RNA1509_40252, RNA815_1426.1}
14. MligTC455_17151 70 1.45 Mlig455_022264

Neo: -

Age: -

0.961 - - 0.961 - - - Mlig455_022264 {REF} {Length: 2660} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.1}
15. MligTC455_39134 462 9.62 Mlig455_011600, Mlig455_054600

Neo: -

Age: -

COPS6 0.959 - - - 0.959 - -

Mlig455_011600 {REF} {Length: 1496} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=108.6]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=59.3, Expect=7e-09]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=78.2, Expect=5e-15]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=65.9, Expect=3e-11]} {RNA1310_87964}

Mlig455_054600 {REF} {Length: 2954} {TRANSSPLICED} {Pfam: Maintenance of mitochondrial structure and function [PF13012.8, score=85.9]; JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=43.1]} {Human: ENSG00000168090, COPS6, COP9 signalosome subunit 6, [RH, Score=243, Expect=6e-78]} {Mouse: ENSMUSG00000019494, Cops6, COP9 signalosome subunit 6, [RH, Score=239, Expect=1e-76]} {Dmel: FBgn0028837, CSN6, COP9 signalosome subunit 6, [RH, Score=233, Expect=3e-74]} {Celegans: WBGene00004464, rpn-8, Proteasome Regulatory Particle, Non-ATPase-like, [Score=89.0, Expect=1e-19]} {Smed: dd_Smed_v6_4168_0_1, dd_Smed_v6_4168_0_1, [RH, Score=131, Expect=1e-35]} {RNA1509_12499, RNA1509_33634} {RNA1310_25406.1, RNA1509_33634} {RNA1509_33634, RNA815_12821.1}
16. MligTC455_49516 1307 27.22 Mlig455_033534, Mlig455_069200

Neo: Germline

Age: -

Region-enriched R4: 2.341/0.00557

KY 0.959 - - - 0.959 - -

Mlig455_033534 {REF} {Length: 4025} {Pfam: LIM domain [PF00412.24, score=34.5]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=131, Expect=7e-31]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=134, Expect=7e-32]} {Dmel: FBgn0050147, Hil, Hillarin, [RH, Score=484, Expect=2e-156]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [RH, Score=355, Expect=7e-109]} {Smed: dd_Smed_v6_1846_0_1, dd_Smed_v6_1846_0_1, [Score=220, Expect=6e-60]} {RNA1509_4625} {RNA1310_2670.1, RNA1509_4625} {RNA1509_4625, RNA815_1677.1}

Mlig455_069200 {REF} {Length: 3762} {TRANSSPLICED} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=122, Expect=3e-28]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=127, Expect=4e-30]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=347, Expect=5e-108]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=305, Expect=1e-95]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=200, Expect=2e-53]} {RNA1509_4625} {RNA1310_2670.1} {RNA815_6810}
17. MligTC455_16219 160 3.33 Mlig455_046926

Neo: -

Age: -

Region-enriched R7: 2.535/0.01658
Region-enriched R6: 2.155/0.01360

0.958 - - - - - 0.958 Mlig455_046926 {REF} {Length: 3093} {RNA1509_37336} {RNA1310_6936.1} {RNA815_9561.1}
18. MligTC455_28252 65 1.35 Mlig455_036681

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-1.253

0.956 - - - - - 0.956 Mlig455_036681 {REF} {Length: 2069} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=64.3, Expect=1e-14]} {RNA1509_20999} {RNA1310_76277} {RNA815_7836.4}
19. MligTC455_52862 1188 24.74 Mlig455_031929, Mlig455_032668

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.118/0.03771

0.956 - - - 0.956 - -

Mlig455_031929 {REF} {Length: 1359} {RNA1509_57987} {RNA1310_20286.1} {RNA815_21366}

Mlig455_032668 {REF} {Length: 1867} {RNA1509_57987} {RNA1310_22434.1, RNA1509_57987} {RNA1509_57987, RNA815_10826}
20. MligTC455_16933 502 10.45 Mlig455_022729

Neo: Irradiation

Age: -

Region-enriched R5: 1.943/0.00000

KIF23 0.955 - - - 0.955 - - Mlig455_022729 {REF} {Length: 3615} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=298.5]; Arf6-interacting domain of mitotic kinesin-like protein 1 [PF16540.7, score=92.9]; Microtubule binding [PF16796.7, score=60.9]} {Human: ENSG00000137807, KIF23, kinesin family member 23, [RH, Score=428, Expect=1e-136]} {Mouse: ENSMUSG00000032254, Kif23, kinesin family member 23, [RH, Score=384, Expect=5e-119]} {Dmel: FBgn0011692, pav, pavarotti, [RH, Score=434, Expect=6e-139]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [RH, Score=377, Expect=8e-119]} {Smed: dd_Smed_v6_9585_0_1, dd_Smed_v6_9585_0_1, [RH, Score=276, Expect=9e-82]} {RNA1509_39292} {RNA1310_6447.1, RNA1509_39292} {RNA1509_39292, RNA815_8976}
21. MligTC455_18686 589 12.27 Mlig455_006304

Neo: -

Age: Down-Up-Down

C9orf78 0.954 - - - 0.954 - - Mlig455_006304 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: Hepatocellular carcinoma-associated antigen 59 [PF07052.13, score=75.1]} {Human: ENSG00000136819, C9orf78, chromosome 9 open reading frame 78, [RH, Score=77.4, Expect=8e-16]} {Mouse: ENSMUSG00000026851, BC005624, cDNA sequence BC005624, [RH, Score=80.5, Expect=6e-17]} {Dmel: FBgn0035254, CG7974, [RH, Score=89.7, Expect=2e-20]} {Smed: dd_Smed_v6_8171_0_1, dd_Smed_v6_8171_0_1, [RH, Score=89.4, Expect=1e-20]} {RNA1509_42392, RNA1509_56512} {RNA1310_25572, RNA1509_42392, RNA1509_56512} {RNA1509_42392, RNA1509_56512, RNA815_11025}
22. MligTC455_40530 158 3.28 Mlig455_061188

Neo: -

Age: Down-Up-Down

0.952 - - - - - 0.952 Mlig455_061188 {REF} {Length: 1859} {RNA1509_57518} {RNA1310_16108, RNA1509_57518} {RNA1509_57518, RNA815_16241}
23. MligTC455_26175 77 1.61 Mlig455_001462, Mlig455_004850, Mlig455_030045, Mlig455_039017

Neo: -

Age: -

Region-enriched R2: 5.289/0.03235

NYNRIN 0.95 - - 0.950 - - -

Mlig455_001462 {REF} {Length: 3779} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

Mlig455_004850 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

Mlig455_030045 {REF} {Length: 4782} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.6]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=49.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=44.5]; Aspartyl protease [PF13650.8, score=32.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=78.6, Expect=5e-14]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=6e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=265, Expect=5e-74]} {RNA1509_38388, RNA1509_56442} {RNA1310_4763.1, RNA1509_38388, RNA1509_56442} {RNA1509_38388, RNA1509_56442, RNA815_16141}

Mlig455_039017 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=48.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.7]; Aspartyl protease [PF13650.8, score=32.2]; Retroviral aspartyl protease [PF00077.22, score=19.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=76.6, Expect=3e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=76.6, Expect=2e-13]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=268, Expect=2e-74]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

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