TomoSeq data search

Data search

Results for MligTC455_40530

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40530

158

3.28

Mlig455_061188

Neo: -

Age: Down-Up-Down

Mlig455_061188 {REF} {Length: 1859} {RNA1509_57518} {RNA1310_16108, RNA1509_57518} {RNA1509_57518, RNA815_16241}

Cumulative graph for MligTC455_40530

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.861	2.424	0.33627	0.98248
RegionR2	2.023	2.424	0.11134	0.41243
RegionR3	0.736	2.424	0.55083	1.00000
RegionR4	-0.304	2.424	0.93400	1.00000
RegionR5	0.406	2.424	0.70199	1.00000
RegionR6	0.167	2.424	0.81220	1.00000
RegionR7	1.064	2.424	0.46100	1.00000
RegionR8	0.77	2.424	0.63995	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.402	2.424	0.99998	1.00000
RegenerationR2	-1.02	2.424	0.24851	0.69499
RegenerationR3	0.198	2.424	0.85138	0.99880
RegenerationR4	2.029	2.424	0.05765	0.38521
RegenerationR5	1.619	2.424	0.09026	0.46197
RegenerationR6	3.315	2.424	0.00153	0.04357
RegenerationBL	-1.587	2.424	0.30372	0.66764
RegenerationTP	0.633	2.424	0.62109	0.97309

Genes with expression patterns similar to MligTC455_40530

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40530	158	3.28	Mlig455_061188	Neo: - Age: Down-Up-Down		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_061188 {REF} {Length: 1859} {RNA1509_57518} {RNA1310_16108, RNA1509_57518} {RNA1509_57518, RNA815_16241}
2.	MligTC455_24897	1565	32.6	Mlig455_048310, Mlig455_048334, Mlig455_048354	Neo: - Age: logFC(26M/2M)=-0.953 Region-enriched R6: 7.021/0.00000	SLC6A5	2.438	-	-	-	0.734	0.950	0.754	Mlig455_048310 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=599.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=531, Expect=3e-179]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=529, Expect=1e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=523, Expect=5e-172]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=408, Expect=4e-134]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=556, Expect=0.0]} {RNA1509_14130} {RNA1310_6202.1, RNA1509_14130} {RNA1509_14130, RNA815_3548} Mlig455_048334 {REF} {Length: 2413} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=594.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=528, Expect=4e-178]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=527, Expect=9e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=518, Expect=9e-170]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=407, Expect=8e-134]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=550, Expect=0.0]} {RNA1509_14130} {RNA1310_6202.1} {RNA815_3548} Mlig455_048354 {REF} {Length: 2413} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=598.4]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=530, Expect=7e-179]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=528, Expect=2e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=522, Expect=2e-171]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=409, Expect=8e-135]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=556, Expect=0.0]} {RNA1509_14130, RNA1509_31856} {RNA1310_6202.1, RNA1509_31856} {RNA1509_31856, RNA815_3548}
3.	MligTC455_25301	467	9.73	Mlig455_060414	Neo: - Age: - Region-enriched R6: 8.250/0.00000		1.715	-	-	-	-	0.955	0.760	Mlig455_060414 {REF} {Length: 1159} {RNA1509_9361} {RNA1310_9984.1} {RNA815_3346.1}
4.	MligTC455_19970	173	3.59	Mlig455_034815	Neo: - Age: - Region-enriched R6: 4.214/0.00162	NR1I2	1.682	-	-	-	0.713	0.969	-	Mlig455_034815 {REF} {Length: 2960} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=75.1]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=136, Expect=2e-34]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=129, Expect=9e-33]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=123, Expect=2e-30]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=134, Expect=3e-33]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [RH, Score=132, Expect=1e-32]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=144, Expect=1e-37]} {RNA1509_24283} {RNA1310_5453} {RNA815_10529.1}
5.	MligTC455_27895	2711	56.48	Mlig455_066568	Neo: - Age: logFC(26M/2M)=-0.498 Region-specific R6: 7.810 Region-enriched R6: 8.330/0.00000	CPO	1.676	-	-	-	-	0.953	0.723	Mlig455_066568 {REF} {Length: 2023} {Pfam: Zinc carboxypeptidase [PF00246.26, score=262.4]} {Human: ENSG00000144410, CPO, carboxypeptidase O, [RH, Score=228, Expect=1e-70]} {Mouse: ENSMUSG00000011463, Cpb1, carboxypeptidase B1 (tissue), [Score=223, Expect=6e-68]; ENSMUSG00000071553, Cpa2, carboxypeptidase A2, pancreatic, [Score=215, Expect=3e-65]} {Dmel: FBgn0029807, CG3108, [Score=231, Expect=9e-67]} {Celegans: WBGene00020281, T06A4.1, [RH, Score=230, Expect=4e-69]} {Smed: dd_Smed_v6_5999_0_1, dd_Smed_v6_5999_0_1, [RH, Score=249, Expect=2e-78]} {RNA1509_5643, RNA1509_6356, RNA1509_726} {RNA1310_6757.1, RNA1509_5643, RNA1509_6356, RNA1509_726} {RNA1509_5643, RNA1509_6356, RNA1509_726, RNA815_5110.2}
6.	MligTC455_27896	2732	56.92	Mlig455_066571	Neo: - Age: Up-Up-Down Region-specific R6: 7.845 Region-enriched R6: 8.459/0.00000	CPO	1.675	-	-	-	-	0.953	0.722	Mlig455_066571 {REF} {Length: 1322} {Pfam: Zinc carboxypeptidase [PF00246.26, score=231.0]} {Human: ENSG00000144410, CPO, carboxypeptidase O, [Score=224, Expect=2e-71]} {Mouse: ENSMUSG00000011463, Cpb1, carboxypeptidase B1 (tissue), [Score=202, Expect=4e-62]} {Dmel: FBgn0029807, CG3108, [Score=210, Expect=1e-61]} {Celegans: WBGene00020281, T06A4.1, [Score=214, Expect=2e-65]} {Smed: dd_Smed_v6_5999_0_1, dd_Smed_v6_5999_0_1, [Score=233, Expect=2e-74]} {RNA1509_25110, RNA1509_6356} {RNA1310_6757.1, RNA1509_25110} {RNA1509_25110, RNA815_5110.2}
7.	MligTC455_28252	65	1.35	Mlig455_036681	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-1.253		0.978	-	-	-	-	-	0.978	Mlig455_036681 {REF} {Length: 2069} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=64.3, Expect=1e-14]} {RNA1509_20999} {RNA1310_76277} {RNA815_7836.4}
8.	MligTC455_07822	103	2.14	Mlig455_009973	Neo: - Age: - Region-enriched R6: 8.220/0.00000		0.971	-	-	-	-	0.971	-	Mlig455_009973 {REF} {Length: 1584} {RNA1310_20970} {RNA815_31710}
9.	MligTC455_46730	96	1.99	Mlig455_024629	Neo: Int S/G2/M Age: -		0.97	-	-	-	-	-	0.970	Mlig455_024629 {REF} {Length: 1676} {TRANSSPLICED} {RNA1509_48335} {RNA1310_57225} {RNA815_34102}
10.	MligTC455_19971	470	9.8	Mlig455_034828	Neo: - Age: Down-Up-Down Region-enriched R6: 4.781/0.00000	NR1I2	0.966	-	-	-	-	0.966	-	Mlig455_034828 {REF} {Length: 2980} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=74.5]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=135, Expect=5e-34]; ENSG00000126351, THRA, thyroid hormone receptor alpha, [Score=130, Expect=6e-33]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=130, Expect=4e-33]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=134, Expect=2e-33]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=129, Expect=9e-32]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=142, Expect=4e-37]} {RNA1509_24283} {RNA1310_5453, RNA1509_24283} {RNA1509_24283, RNA815_10529.1}
11.	MligTC455_16323	272	5.66	Mlig455_033108	Neo: - Age: Up-Down-Down Regeneration-enriched R6: 8.020 Regeneration-enriched R5: 6.117	CYP2U1	0.964	-	-	-	-	0.964	-	Mlig455_033108 {REF} {Length: 2725} {Pfam: Cytochrome P450 [PF00067.24, score=265.7]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=194, Expect=1e-54]; ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=192, Expect=1e-54]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=187, Expect=1e-52]} {Mouse: ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=192, Expect=1e-54]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=192, Expect=2e-54]; ENSMUSG00000082932, Cyp2j8, cytochrome P450, family 2, subfamily j, polypeptide 8, [Score=190, Expect=9e-54]; ENSMUSG00000074254, Cyp2a4, cytochrome P450, family 2, subfamily a, polypeptide 4, [Score=187, Expect=1e-52]; ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=186, Expect=3e-52]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=186, Expect=2e-52]; ENSMUSG00000022445, Cyp2d26, cytochrome P450, family 2, subfamily d, polypeptide 26, [Score=186, Expect=2e-52]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=185, Expect=7e-52]; ENSMUSG00000005547, Cyp2a5, cytochrome P450, family 2, subfamily a, polypeptide 5, [Score=184, Expect=2e-51]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=183, Expect=6e-51]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=183, Expect=6e-51]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=170, Expect=3e-46]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=196, Expect=2e-56]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=194, Expect=1e-55]} {RNA1310_26583} {RNA815_18006}
12.	MligTC455_16324	623	12.98	Mlig455_010953, Mlig455_033136	Neo: - Age: Up-Up-Down Regeneration-enriched R3: 8.476 Regeneration-enriched R6: 7.051 Regeneration-enriched R4: 7.012	CYP2A6, CYP2U1	0.961	-	-	-	-	0.961	-	Mlig455_010953 {REF} {Length: 2835} {Pfam: Cytochrome P450 [PF00067.24, score=259.9]} {Human: ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=191, Expect=8e-54]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=187, Expect=2e-52]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=184, Expect=4e-51]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=192, Expect=2e-54]; ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=191, Expect=3e-54]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=189, Expect=2e-53]; ENSMUSG00000082932, Cyp2j8, cytochrome P450, family 2, subfamily j, polypeptide 8, [Score=189, Expect=2e-53]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=183, Expect=3e-51]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=162, Expect=3e-43]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=191, Expect=1e-54]} {Smed: dd_Smed_v6_2351_0_3, dd_Smed_v6_2351_0_3, [Score=191, Expect=1e-54]} {RNA1310_26583} {RNA815_18006} Mlig455_033136 {REF} {Length: 2565} {Pfam: Cytochrome P450 [PF00067.24, score=259.8]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=191, Expect=9e-54]; ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=190, Expect=9e-54]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=187, Expect=2e-52]} {Mouse: ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=193, Expect=6e-55]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=189, Expect=2e-53]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=189, Expect=3e-53]; ENSMUSG00000082932, Cyp2j8, cytochrome P450, family 2, subfamily j, polypeptide 8, [Score=188, Expect=4e-53]; ENSMUSG00000074254, Cyp2a4, cytochrome P450, family 2, subfamily a, polypeptide 4, [Score=185, Expect=4e-52]; ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=184, Expect=2e-51]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=170, Expect=4e-46]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=194, Expect=1e-55]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=193, Expect=3e-55]} {RNA1310_26583} {RNA815_18006}
13.	MligTC455_45568	73	1.52	Mlig455_045036	Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 2.439/0.00238	PRDX2	0.961	-	-	-	-	-	0.961	Mlig455_045036 {REF} {Length: 1089} {TRANSSPLICED} {Pfam: AhpC/TSA family [PF00578.23, score=126.9]; Redoxin [PF08534.12, score=59.0]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=52.3]} {Human: ENSG00000167815, PRDX2, peroxiredoxin 2, [RH, Score=271, Expect=8e-92]} {Mouse: ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [RH, Score=277, Expect=2e-94]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [Score=268, Expect=4e-91]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=262, Expect=9e-89]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=284, Expect=1e-97]} {RNA1509_41676} {RNA1310_17406, RNA1509_41676} {RNA1509_41676, RNA815_10619}
14.	MligTC455_27737	1336	27.84	Mlig455_056926	Neo: - Age: logFC(26M/2M)=-0.801 Region-specific R6: 7.000 Region-enriched R6: 7.332/0.00000		0.957	-	-	-	-	0.957	-	Mlig455_056926 {REF} {Length: 233} {NoTransDecoderORF} {RNA1509_11291} {RNA1310_76104.1} {RNA815_39096}
15.	MligTC455_53250	122	2.54	Mlig455_067502	Neo: - Age: -	WBP4	0.952	-	-	-	-	-	0.952	Mlig455_067502 {REF} {Length: 1131} {TRANSSPLICED} {Pfam: WW domain [PF00397.28, score=42.4]; U1 zinc finger [PF06220.14, score=41.5]} {Human: ENSG00000120688, WBP4, WW domain binding protein 4, [RH, Score=86.3, Expect=1e-18]} {Mouse: ENSMUSG00000022023, Wbp4, WW domain binding protein 4, [RH, Score=89.4, Expect=6e-20]} {Dmel: FBgn0031287, CG4291, [RH, Score=89.4, Expect=3e-20]} {Smed: dd_Smed_v6_10030_0_6, dd_Smed_v6_10030_0_6, [RH, Score=85.9, Expect=4e-20]} {RNA1509_46002} {RNA1310_29789, RNA1509_46002} {RNA1509_46002, RNA815_12245}
16.	MligTC455_27791	122	2.53	Mlig455_022712	Neo: - Age: - Region-enriched R4: 3.062/0.02349 Region-enriched R5: 2.979/0.00495		0.95	-	-	-	-	-	0.950	Mlig455_022712 {REF} {Length: 4083} {RNA1509_10146, RNA1509_58545} {RNA1310_8181.1, RNA1509_58545} {RNA1509_58545, RNA815_1721.1}

Berezikov Lab - 2020-2021 © ERIBA