Data search
Results for MligTC455_53270
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53270 | 930 | 19.37 | Mlig455_030406 | Neo: Int S/G2/M Age: - |
SF3B4 | Mlig455_030406 {REF} {Length: 1496} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=132.7]; RNA recognition motif [PF16367.7, score=32.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.5]} {Human: ENSG00000143368, SF3B4, splicing factor 3b subunit 4, [RH, Score=400, Expect=4e-138]} {Mouse: ENSMUSG00000068856, Sf3b4, splicing factor 3b, subunit 4, [RH, Score=401, Expect=2e-138]} {Dmel: FBgn0015818, Spx, Spliceosomal protein on the X, [RH, Score=386, Expect=4e-134]} {Celegans: WBGene00004723, sap-49, Splicing factor 3B subunit 4, [RH, Score=371, Expect=2e-127]} {Smed: dd_Smed_v6_3556_0_1, dd_Smed_v6_3556_0_1, [RH, Score=402, Expect=8e-141]} {RNA1509_11168, RNA1509_41241} {RNA1310_45243, RNA1509_41241} {RNA1509_41241, RNA815_14059.2} |
Cumulative graph for MligTC455_53270
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.683 | 4.482 | 0.49683 | 1.00000 | |
| RegionR2 | 0.175 | 4.482 | 0.69853 | 1.00000 | |
| RegionR3 | -0.481 | 4.482 | 0.21511 | 0.75646 | |
| RegionR4 | 0.45 | 4.482 | 0.26564 | 0.57022 | |
| RegionR5 | 0.891 | 4.482 | 0.00498 | 0.03450 | |
| RegionR6 | -0.004 | 4.482 | 0.99246 | 1.00000 | |
| RegionR7 | -0.264 | 4.482 | 0.60042 | 1.00000 | |
| RegionR8 | -0.084 | 4.482 | 0.88990 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.014 | 4.482 | 0.99210 | 1.00000 | |
| RegenerationR2 | -0.228 | 4.482 | 0.56396 | 0.90040 | |
| RegenerationR3 | 0.953 | 4.482 | 0.03029 | 0.31161 | |
| RegenerationR4 | 0.217 | 4.482 | 0.59961 | 0.91336 | |
| RegenerationR5 | 0.142 | 4.482 | 0.70040 | 0.95191 | |
| RegenerationR6 | 1.381 | 4.482 | 0.00084 | 0.03135 | |
| RegenerationBL | 0.59 | 4.482 | 0.21859 | 0.56542 | |
| RegenerationTP | 0.397 | 4.482 | 0.46175 | 0.87516 |
Genes with expression patterns similar to MligTC455_53270
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53270 | 930 | 19.37 | Mlig455_030406 | Neo: Int S/G2/M Age: - |
SF3B4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030406 {REF} {Length: 1496} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=132.7]; RNA recognition motif [PF16367.7, score=32.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.5]} {Human: ENSG00000143368, SF3B4, splicing factor 3b subunit 4, [RH, Score=400, Expect=4e-138]} {Mouse: ENSMUSG00000068856, Sf3b4, splicing factor 3b, subunit 4, [RH, Score=401, Expect=2e-138]} {Dmel: FBgn0015818, Spx, Spliceosomal protein on the X, [RH, Score=386, Expect=4e-134]} {Celegans: WBGene00004723, sap-49, Splicing factor 3B subunit 4, [RH, Score=371, Expect=2e-127]} {Smed: dd_Smed_v6_3556_0_1, dd_Smed_v6_3556_0_1, [RH, Score=402, Expect=8e-141]} {RNA1509_11168, RNA1509_41241} {RNA1310_45243, RNA1509_41241} {RNA1509_41241, RNA815_14059.2} |
| 2. | MligTC455_53271 | 514 | 10.71 | Mlig455_069029 | Neo: - Age: Down-Up-Up |
SF3B4 | 3.743 | 0.991 | 0.989 | - | 0.822 | 0.941 | - | Mlig455_069029 {REF} {Length: 1520} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=134.0]; RNA recognition motif [PF16367.7, score=32.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.3]} {Human: ENSG00000143368, SF3B4, splicing factor 3b subunit 4, [RH, Score=400, Expect=3e-138]} {Mouse: ENSMUSG00000068856, Sf3b4, splicing factor 3b, subunit 4, [RH, Score=401, Expect=2e-138]} {Dmel: FBgn0015818, Spx, Spliceosomal protein on the X, [RH, Score=387, Expect=4e-134]} {Celegans: WBGene00004723, sap-49, Splicing factor 3B subunit 4, [RH, Score=371, Expect=1e-127]} {Smed: dd_Smed_v6_3556_0_1, dd_Smed_v6_3556_0_1, [RH, Score=402, Expect=6e-141]} {RNA1509_11168} {RNA1310_45243, RNA1509_11168} {RNA1509_11168, RNA815_14059.2} |
| 3. | MligTC455_26457 | 836 | 17.43 | Mlig455_001958 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.330 Region-enriched R5: 1.295/0.00399 |
2.653 | 0.876 | - | - | - | 0.950 | 0.827 | Mlig455_001958 {REF} {Length: 1615} {TRANSSPLICED} {Pfam: Regulatory factor X-associated C-terminal binding domain [PF15289.8, score=19.6]} {RNA1509_43649, RNA1509_50433} {RNA1310_19279, RNA1509_43649, RNA1509_50433} {RNA1509_43649, RNA1509_50433, RNA815_22593} | |
| 4. | MligTC455_50670 | 1021 | 21.27 | Mlig455_026568 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.125/0.03562 |
SF3A2 | 1.787 | - | - | 0.832 | - | 0.955 | - | Mlig455_026568 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) [PF16835.7, score=127.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.7]; Cactus-binding C-terminus of cactin protein [PF09732.11, score=19.2]} {Human: ENSG00000104897, SF3A2, splicing factor 3a subunit 2, [RH, Score=355, Expect=1e-120]} {Mouse: ENSMUSG00000020211, Sf3a2, splicing factor 3a, subunit 2, [Score=355, Expect=3e-120]} {Dmel: FBgn0036314, Sf3a2, Splicing factor 3a subunit 2, [RH, Score=377, Expect=1e-132]} {Celegans: WBGene00008683, repo-1, REversed POlarity in early embryos, [RH, Score=361, Expect=5e-127]} {Smed: dd_Smed_v6_1788_0_1, dd_Smed_v6_1788_0_1, [RH, Score=372, Expect=5e-130]} {RNA1509_34887, RNA1509_9978} {RNA1310_38332.1, RNA1509_34887} {RNA1509_34887, RNA815_9802} |
| 5. | MligTC455_39007 | 2184 | 45.51 | Mlig455_062119, Mlig455_069663 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.418/0.00014 Regeneration-upregulated BL: 1.963 Regeneration-enriched BL: 1.963 |
NUP210, NUP210L | 1.73 | - | - | - | - | 0.770 | 0.960 | Mlig455_062119 {REF} {Length: 7147} {Pfam: Bacterial Ig-like domain (group 2) [PF02368.20, score=26.5]} {Human: ENSG00000132182, NUP210, nucleoporin 210, [RH, Score=536, Expect=2e-159]} {Mouse: ENSMUSG00000027939, Nup210l, nucleoporin 210-like, [RH, Score=506, Expect=2e-149]} {Dmel: FBgn0266580, Gp210, Glycoprotein 210 kDa, [RH, Score=243, Expect=2e-64]} {Celegans: WBGene00003798, npp-12, Nuclear Pore complex Protein, [Score=248, Expect=5e-66]} {Smed: dd_Smed_v6_4698_0_1, dd_Smed_v6_4698_0_1, [RH, Score=549, Expect=1e-163]} {RNA1509_2772} {RNA1310_410.1} {RNA815_6899} Mlig455_069663 {REF} {Length: 6507} {Pfam: Bacterial Ig-like domain (group 2) [PF02368.20, score=22.5]} {Human: ENSG00000143552, NUP210L, nucleoporin 210 like, [Score=473, Expect=8e-137]} {Mouse: ENSMUSG00000027939, Nup210l, nucleoporin 210-like, [RH, Score=506, Expect=5e-148]} {Dmel: FBgn0266580, Gp210, Glycoprotein 210 kDa, [Score=224, Expect=2e-58]} {Celegans: WBGene00003798, npp-12, Nuclear Pore complex Protein, [RH, Score=226, Expect=6e-59]} {Smed: dd_Smed_v6_4698_0_1, dd_Smed_v6_4698_0_1, [Score=538, Expect=2e-158]} {RNA1509_2772} {RNA1310_410.1} {RNA815_6899} |
| 6. | MligTC455_20118 | 473 | 9.86 | Mlig455_004413, Mlig455_037246 | Neo: - Age: - Region-enriched R5: 1.095/0.02037 |
UPRT | 1.687 | - | - | - | 0.731 | 0.956 | - | Mlig455_004413 {REF} {Length: 2779} {TRANSSPLICED} {Pfam: Uracil phosphoribosyltransferase [PF14681.8, score=131.9]} {Human: ENSG00000094841, UPRT, uracil phosphoribosyltransferase homolog, [Score=211, Expect=8e-67]} {Mouse: ENSMUSG00000073016, Uprt, uracil phosphoribosyltransferase, [Score=216, Expect=6e-69]} {Dmel: FBgn0035639, kri, krishah, [Score=197, Expect=3e-62]} {Celegans: WBGene00008131, C47B2.2, [RH, Score=188, Expect=4e-59]} {Smed: dd_Smed_v6_6546_0_1, dd_Smed_v6_6546_0_1, [Score=206, Expect=3e-66]} {RNA1509_28661} {RNA1310_30463.1} {RNA815_13705} Mlig455_037246 {REF} {Length: 1949} {NoTransDecoderORF} {RNA1509_37793} {RNA1310_21553, RNA1509_37793} {RNA1509_37793, RNA815_29701} |
| 7. | MligTC455_36578 | 5214 | 108.63 | Mlig455_043909 | Neo: Int S/G2/M Age: - Regeneration-enriched BL: 1.402 |
PSMC6 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_043909 {REF} {Length: 2375} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=145.5]; AAA+ lid domain [PF17862.3, score=45.2]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=34.2]; AAA ATPase domain [PF13191.8, score=33.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.7]; AAA domain (Cdc48 subfamily) [PF07724.16, score=26.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.3]; AAA domain [PF13401.8, score=20.5]} {Human: ENSG00000100519, PSMC6, proteasome 26S subunit, ATPase 6, [RH, Score=683, Expect=0.0]} {Mouse: ENSMUSG00000021832, Psmc6, proteasome (prosome, macropain) 26S subunit, ATPase, 6, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0028685, Rpt4, Regulatory particle triple-A ATPase 4, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00004504, rpt-4, Probable 26S protease regulatory subunit 10B, [RH, Score=655, Expect=0.0]} {Smed: dd_Smed_v6_2133_0_1, dd_Smed_v6_2133_0_1, [RH, Score=697, Expect=0.0]} {RNA1509_12298, RNA1509_1468, RNA1509_15727} {RNA1310_14071, RNA1509_12298, RNA1509_1468, RNA1509_15727} {RNA1509_12298, RNA1509_1468, RNA1509_15727, RNA815_6834} |
| 8. | MligTC455_22089 | 90 | 1.87 | Mlig455_003176 | Neo: Irradiation Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_003176 {REF} {Length: 3783} {TRANSSPLICED} {RNA1509_23005} {RNA1310_11644.1} {RNA815_1539.2} |
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