Data search
Results for MligTC455_22089
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22089 | 90 | 1.87 | Mlig455_003176 | Neo: Irradiation Age: - |
Mlig455_003176 {REF} {Length: 3783} {TRANSSPLICED} {RNA1509_23005} {RNA1310_11644.1} {RNA815_1539.2} |
Cumulative graph for MligTC455_22089
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.564 | 1.977 | 1.00000 | 1.00000 | |
| RegionR2 | 3.513 | 1.977 | 0.01505 | 0.12975 | |
| RegionR3 | 2.31 | 1.977 | 0.02573 | 0.27394 | |
| RegionR4 | -0.183 | 1.977 | 0.83541 | 1.00000 | |
| RegionR5 | 1.564 | 1.977 | 0.15635 | 0.41456 | |
| RegionR6 | 1.707 | 1.977 | 0.15223 | 0.69557 | |
| RegionR7 | 0.805 | 1.977 | 0.56121 | 1.00000 | |
| RegionR8 | -3.151 | 1.977 | 0.99977 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.653 | 1.977 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.459 | 1.977 | 0.13898 | 0.56807 | |
| RegenerationR3 | 2.08 | 1.977 | 0.03001 | 0.31104 | |
| RegenerationR4 | 1.348 | 1.977 | 0.18481 | 0.62602 | |
| RegenerationR5 | 2.363 | 1.977 | 0.00185 | 0.07395 | |
| RegenerationR6 | 3.114 | 1.977 | 0.00166 | 0.04541 | |
| RegenerationBL | 4.492 | 1.977 | 0.01313 | 0.11823 | |
| RegenerationTP | 3.553 | 1.977 | 0.17855 | 0.61380 |
Genes with expression patterns similar to MligTC455_22089
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22089 | 90 | 1.87 | Mlig455_003176 | Neo: Irradiation Age: - |
4 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | Mlig455_003176 {REF} {Length: 3783} {TRANSSPLICED} {RNA1509_23005} {RNA1310_11644.1} {RNA815_1539.2} | |
| 2. | MligTC455_49548 | 163 | 3.4 | Mlig455_028627 | Neo: - Age: - |
NR6A1 | 1.868 | - | - | - | - | 0.915 | 0.953 | Mlig455_028627 {REF} {Length: 4064} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.2]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=65.1, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.0, Expect=6e-12]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=6e-14]} {RNA1509_44831, RNA1509_56197} {RNA1310_45687.1, RNA1509_44831} {RNA1509_44831, RNA815_27369.2} |
| 3. | MligTC455_25117 | 227 | 4.74 | Mlig455_034425 | Neo: - Age: - |
WARS2 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_034425 {REF} {Length: 1953} {TRANSSPLICED} {Pfam: tRNA synthetases class I (W and Y) [PF00579.27, score=184.3]} {Human: ENSG00000116874, WARS2, tryptophanyl tRNA synthetase 2, mitochondrial, [RH, Score=267, Expect=1e-86]} {Mouse: ENSMUSG00000004233, Wars2, tryptophanyl tRNA synthetase 2 (mitochondrial), [RH, Score=250, Expect=3e-80]} {Dmel: FBgn0036763, TrpRS-m, Tryptophanyl-tRNA synthetase, mitochondrial, [RH, Score=233, Expect=2e-70]} {Celegans: WBGene00006946, prx-10, Tryptophan--tRNA ligase, mitochondrial, [RH, Score=225, Expect=9e-71]} {Smed: dd_Smed_v6_6466_0_1, dd_Smed_v6_6466_0_1, [RH, Score=230, Expect=1e-72]} {RNA1509_24436} {RNA1310_20843.2, RNA1509_24436} {RNA1509_24436, RNA815_16422} |
| 4. | MligTC455_53270 | 930 | 19.37 | Mlig455_030406 | Neo: Int S/G2/M Age: - |
SF3B4 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_030406 {REF} {Length: 1496} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=132.7]; RNA recognition motif [PF16367.7, score=32.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.5]} {Human: ENSG00000143368, SF3B4, splicing factor 3b subunit 4, [RH, Score=400, Expect=4e-138]} {Mouse: ENSMUSG00000068856, Sf3b4, splicing factor 3b, subunit 4, [RH, Score=401, Expect=2e-138]} {Dmel: FBgn0015818, Spx, Spliceosomal protein on the X, [RH, Score=386, Expect=4e-134]} {Celegans: WBGene00004723, sap-49, Splicing factor 3B subunit 4, [RH, Score=371, Expect=2e-127]} {Smed: dd_Smed_v6_3556_0_1, dd_Smed_v6_3556_0_1, [RH, Score=402, Expect=8e-141]} {RNA1509_11168, RNA1509_41241} {RNA1310_45243, RNA1509_41241} {RNA1509_41241, RNA815_14059.2} |
| 5. | MligTC455_52533 | 399 | 8.32 | Mlig455_001263 | Neo: Int S/G2/M Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_001263 {REF} {Length: 2980} {TRANSSPLICED} {Pfam: Nucleoporin protein Ndc1-Nup [PF09531.12, score=55.1]} {RNA1509_16900} {RNA1310_7021, RNA1509_16900} {RNA1509_16900, RNA815_8245.1} | |
| 6. | MligTC455_27322 | 336 | 7 | Mlig455_010205 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=-0.326 Region-enriched R5: 1.364/0.02539 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_010205 {REF} {Length: 3139} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=30.2]} {RNA1509_25391} {RNA1310_14948} {RNA815_4608.2} |
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