Data search
Results for MligTC455_53291
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53291 | 317 | 6.59 | Mlig455_028908 | Neo: - Age: - |
ATG4D | Mlig455_028908 {REF} {Length: 2631} {TRANSSPLICED} {Pfam: Peptidase family C54 [PF03416.21, score=151.3]} {Human: ENSG00000130734, ATG4D, autophagy related 4D cysteine peptidase, [Score=115, Expect=5e-27]} {Mouse: ENSMUSG00000002820, Atg4d, autophagy related 4D, cysteine peptidase, [Score=112, Expect=2e-26]; ENSMUSG00000116318, Atg4a, autophagy related 4A, cysteine peptidase, [Score=109, Expect=1e-25]; ENSMUSG00000079418, Atg4a, autophagy related 4A, cysteine peptidase, [Score=109, Expect=1e-25]; ENSMUSG00000026280, Atg4b, autophagy related 4B, cysteine peptidase, [Score=108, Expect=3e-25]; ENSMUSG00000087119, Atg4a-ps, autophagy related 4A, pseudogene, [Score=108, Expect=2e-25]} {Dmel: FBgn0038325, Atg4b, Autophagy-related 4b, [Score=112, Expect=5e-26]} {Celegans: WBGene00013595, atg-4.1, Cysteine protease, [Score=117, Expect=2e-28]} {Smed: dd_Smed_v6_6720_0_1, dd_Smed_v6_6720_0_1, [Score=117, Expect=1e-28]} {RNA1509_30649} {RNA1310_14296, RNA1509_30649} {RNA1509_30649, RNA815_16224} |
Cumulative graph for MligTC455_53291
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.507 | 3.345 | 0.09796 | 0.66273 | |
| RegionR2 | 0.878 | 3.345 | 0.39656 | 0.79086 | |
| RegionR3 | 1.397 | 3.345 | 0.07489 | 0.48488 | |
| RegionR4 | 1.406 | 3.345 | 0.12241 | 0.35125 | |
| RegionR5 | 1.424 | 3.345 | 0.04963 | 0.18658 | |
| RegionR6 | 1.122 | 3.345 | 0.18457 | 0.74984 | |
| RegionR7 | 0.328 | 3.345 | 0.71620 | 1.00000 | |
| RegionR8 | -0.048 | 3.345 | 0.87229 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.414 | 3.345 | 0.99994 | 1.00000 | |
| RegenerationR2 | -0.383 | 3.345 | 0.49102 | 0.86808 | |
| RegenerationR3 | -0.219 | 3.345 | 0.70889 | 0.95121 | |
| RegenerationR4 | -0.012 | 3.345 | 0.98091 | 1.00000 | |
| RegenerationR5 | 0.258 | 3.345 | 0.62920 | 0.92238 | |
| RegenerationR6 | 0.711 | 3.345 | 0.22647 | 0.57184 | |
| RegenerationBL | -1.498 | 3.345 | 0.14386 | 0.45234 | |
| RegenerationTP | -1.245 | 3.345 | 0.23451 | 0.68038 |
Genes with expression patterns similar to MligTC455_53291
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53291 | 317 | 6.59 | Mlig455_028908 | Neo: - Age: - |
ATG4D | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028908 {REF} {Length: 2631} {TRANSSPLICED} {Pfam: Peptidase family C54 [PF03416.21, score=151.3]} {Human: ENSG00000130734, ATG4D, autophagy related 4D cysteine peptidase, [Score=115, Expect=5e-27]} {Mouse: ENSMUSG00000002820, Atg4d, autophagy related 4D, cysteine peptidase, [Score=112, Expect=2e-26]; ENSMUSG00000116318, Atg4a, autophagy related 4A, cysteine peptidase, [Score=109, Expect=1e-25]; ENSMUSG00000079418, Atg4a, autophagy related 4A, cysteine peptidase, [Score=109, Expect=1e-25]; ENSMUSG00000026280, Atg4b, autophagy related 4B, cysteine peptidase, [Score=108, Expect=3e-25]; ENSMUSG00000087119, Atg4a-ps, autophagy related 4A, pseudogene, [Score=108, Expect=2e-25]} {Dmel: FBgn0038325, Atg4b, Autophagy-related 4b, [Score=112, Expect=5e-26]} {Celegans: WBGene00013595, atg-4.1, Cysteine protease, [Score=117, Expect=2e-28]} {Smed: dd_Smed_v6_6720_0_1, dd_Smed_v6_6720_0_1, [Score=117, Expect=1e-28]} {RNA1509_30649} {RNA1310_14296, RNA1509_30649} {RNA1509_30649, RNA815_16224} |
| 2. | MligTC455_18762 | 32 | 0.68 | Mlig455_065265 | Neo: - Age: - |
ANK1 | 0.976 | - | - | - | - | 0.976 | - | Mlig455_065265 {REF} {Length: 4359} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=267.6]; Ankyrin repeats (many copies) [PF13637.8, score=187.6]; Ankyrin repeat [PF00023.32, score=184.8]; Ankyrin repeats (many copies) [PF13857.8, score=167.0]; Ankyrin repeat [PF13606.8, score=145.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=271, Expect=5e-74]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=257, Expect=1e-69]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=229, Expect=2e-60]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=233, Expect=4e-62]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=218, Expect=5e-59]} {RNA1509_24588} {RNA1310_27979} {RNA815_13672} |
| 3. | MligTC455_37570 | 446 | 9.3 | Mlig455_009506 | Neo: - |
SRP72 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_009506 {REF} {Length: 3095} {Pfam: Putative TPR-like repeat [PF17004.7, score=60.8]; SRP72 RNA-binding domain [PF08492.14, score=58.5]; Tetratricopeptide repeat [PF07719.19, score=30.2]} {Human: ENSG00000174780, SRP72, signal recognition particle 72, [RH, Score=338, Expect=4e-106]} {Mouse: ENSMUSG00000036323, Srp72, signal recognition particle 72, [RH, Score=328, Expect=1e-102]} {Dmel: FBgn0038810, Srp72, Signal recognition particle protein 72, [RH, Score=287, Expect=4e-87]} {Celegans: WBGene00017245, srpa-72, Signal recognition particle subunit SRP72, [RH, Score=241, Expect=4e-70]} {Smed: dd_Smed_v6_2629_0_1, dd_Smed_v6_2629_0_1, [RH, Score=375, Expect=2e-120]} {RNA1509_27018, RNA1509_4629} {RNA1310_9141.3, RNA1509_27018, RNA1509_4629} {RNA1509_27018, RNA1509_4629, RNA815_4690} |
| 4. | MligTC455_48503 | 1623 | 33.8 | Mlig455_038159, Mlig455_038264 | Neo: - Age: - |
ERCC2 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_038159 {REF} {Length: 2889} {Pfam: DEAD_2 [PF06733.17, score=158.5]; Helicase C-terminal domain [PF13307.8, score=148.2]; Helical and beta-bridge domain [PF06777.13, score=128.6]; Type III restriction enzyme, res subunit [PF04851.17, score=24.7]; DEAD/DEAH box helicase [PF00270.31, score=20.9]} {Human: ENSG00000104884, ERCC2, ERCC excision repair 2, TFIIH core complex helicase subunit, [RH, Score=1053, Expect=0.0]} {Mouse: ENSMUSG00000030400, Ercc2, excision repair cross-complementing rodent repair deficiency, complementation group 2, [RH, Score=1048, Expect=0.0]} {Dmel: FBgn0261850, Xpd, Xeroderma pigmentosum D, [RH, Score=1044, Expect=0.0]} {Celegans: WBGene00021752, xpd-1, XPD (Xeroderma Pigmentosum complementation group D) related, [RH, Score=754, Expect=0.0]} {Smed: dd_Smed_v6_8198_0_2, dd_Smed_v6_8198_0_2, [RH, Score=936, Expect=0.0]} {RNA1509_4106, RNA1509_53512} {RNA1310_4020.2, RNA1509_53512} {RNA1509_53512, RNA815_1351.1} Mlig455_038264 {REF} {Length: 2889} {Pfam: DEAD_2 [PF06733.17, score=158.5]; Helicase C-terminal domain [PF13307.8, score=148.2]; Helical and beta-bridge domain [PF06777.13, score=128.6]; Type III restriction enzyme, res subunit [PF04851.17, score=24.7]; DEAD/DEAH box helicase [PF00270.31, score=20.9]} {Human: ENSG00000104884, ERCC2, ERCC excision repair 2, TFIIH core complex helicase subunit, [RH, Score=1053, Expect=0.0]} {Mouse: ENSMUSG00000030400, Ercc2, excision repair cross-complementing rodent repair deficiency, complementation group 2, [RH, Score=1048, Expect=0.0]} {Dmel: FBgn0261850, Xpd, Xeroderma pigmentosum D, [RH, Score=1044, Expect=0.0]} {Celegans: WBGene00021752, xpd-1, XPD (Xeroderma Pigmentosum complementation group D) related, [RH, Score=754, Expect=0.0]} {Smed: dd_Smed_v6_8198_0_2, dd_Smed_v6_8198_0_2, [RH, Score=936, Expect=0.0]} {RNA1509_4106} {RNA1310_4020.2, RNA1509_4106} {RNA1509_4106, RNA815_1351.1} |
| 5. | MligTC455_13180 | 308 | 6.41 | Mlig455_006099, Mlig455_032871 | Neo: - Age: - |
RERE | 0.961 | - | - | - | - | - | 0.961 | Mlig455_006099 {REF} {Length: 3462} {TRANSSPLICED} {Pfam: BAH domain [PF01426.20, score=49.2]; ELM2 domain [PF01448.26, score=36.1]; YL1 nuclear protein [PF05764.15, score=20.6]; Atrophin-1 family [PF03154.17, score=18.3]} {Human: ENSG00000142599, RERE, arginine-glutamic acid dipeptide repeats, [RH, Score=254, Expect=1e-69]} {Mouse: ENSMUSG00000039852, Rere, arginine glutamic acid dipeptide (RE) repeats, [RH, Score=253, Expect=2e-69]} {Dmel: FBgn0010825, Gug, Grunge, [RH, Score=157, Expect=1e-38]} {Celegans: WBGene00001194, egl-27, Egg-laying defective protein 27, [RH, Score=154, Expect=4e-38]} {Smed: dd_Smed_v6_6341_0_1, dd_Smed_v6_6341_0_1, [RH, Score=191, Expect=1e-49]} {RNA1509_37003, RNA1509_9251} {RNA1310_3861, RNA1509_9251} {RNA1509_9251, RNA815_1114.1} Mlig455_032871 {REF} {Length: 3328} {TRANSSPLICED} {Pfam: BAH domain [PF01426.20, score=49.2]; ELM2 domain [PF01448.26, score=36.2]; YL1 nuclear protein [PF05764.15, score=20.5]; Atrophin-1 family [PF03154.17, score=18.6]; BUD22 [PF09073.12, score=18.1]} {Human: ENSG00000142599, RERE, arginine-glutamic acid dipeptide repeats, [Score=211, Expect=9e-56]} {Mouse: ENSMUSG00000039852, Rere, arginine glutamic acid dipeptide (RE) repeats, [Score=213, Expect=3e-56]} {Dmel: FBgn0010825, Gug, Grunge, [Score=109, Expect=7e-24]} {Celegans: WBGene00001194, egl-27, Egg-laying defective protein 27, [Score=112, Expect=4e-25]} {Smed: dd_Smed_v6_6341_0_1, dd_Smed_v6_6341_0_1, [Score=166, Expect=7e-42]} {RNA1509_37003} {RNA1310_3861} {RNA815_1114.1} |
| 6. | MligTC455_49169 | 409 | 8.52 | Mlig455_014589 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.141 |
SLC30A5 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_014589 {REF} {Length: 3364} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=140.9]} {Human: ENSG00000145740, SLC30A5, solute carrier family 30 member 5, [Score=456, Expect=3e-150]} {Mouse: ENSMUSG00000021629, Slc30a5, solute carrier family 30 (zinc transporter), member 5, [Score=446, Expect=1e-146]} {Dmel: FBgn0037875, ZnT86D, Zinc transporter 86D, [Score=136, Expect=8e-35]} {Celegans: WBGene00013668, Y105E8A.3, [Score=327, Expect=2e-101]} {Smed: dd_Smed_v6_4378_0_1, dd_Smed_v6_4378_0_1, [Score=401, Expect=1e-129]} {RNA1509_47381} {RNA1310_7900} {RNA815_16274} |
| 7. | MligTC455_05614 | 808 | 16.83 | Mlig455_033658 | Neo: - Age: Down-Down-Up |
EPHX1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_033658 {REF} {Length: 1910} {Pfam: Epoxide hydrolase N terminus [PF06441.14, score=109.2]; alpha/beta hydrolase fold [PF00561.22, score=59.6]} {Human: ENSG00000143819, EPHX1, epoxide hydrolase 1, [RH, Score=374, Expect=1e-125]} {Mouse: ENSMUSG00000038776, Ephx1, epoxide hydrolase 1, microsomal, [RH, Score=367, Expect=5e-123]} {Dmel: FBgn0010053, Jheh1, Juvenile hormone epoxide hydrolase 1, [RH, Score=304, Expect=3e-98]} {Celegans: WBGene00020909, W01A11.1, Epoxide hydrolase, [Score=329, Expect=2e-108]} {Smed: dd_Smed_v6_5113_0_1, dd_Smed_v6_5113_0_1, [Score=333, Expect=4e-110]} {RNA1509_11467} {RNA1310_15477, RNA1509_11467} {RNA1509_11467, RNA815_6806.1} |
| 8. | MligTC455_14948 | 775 | 16.14 | Mlig455_070128 | Neo: - Age: - Region-enriched R5: 1.290/0.00023 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_070128 {REF} {Length: 1941} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=49.6]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=146, Expect=1e-40]} {RNA1509_19514} {RNA1310_15638} {RNA815_3347.1} | |
| 9. | MligTC455_35028 | 246 | 5.12 | Mlig455_070778 | Neo: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_070778 {REF} {Length: 1634} {TRANSSPLICED} {RNA1509_21464} {RNA1310_30597} {RNA815_11296} | |
| 10. | MligTC455_28063 | 833 | 17.35 | Mlig455_056559 | Neo: - Age: - |
TFB1M | 0.951 | - | - | - | - | - | 0.951 | Mlig455_056559 {REF} {Length: 1318} {TRANSSPLICED} {Pfam: Ribosomal RNA adenine dimethylase [PF00398.22, score=119.9]; Methyltransferase domain [PF13649.8, score=22.8]; Protein of unknown function (DUF1698) [PF08003.13, score=19.7]; Methyltransferase domain [PF13489.8, score=18.8]} {Human: ENSG00000029639, TFB1M, transcription factor B1, mitochondrial, [RH, Score=237, Expect=3e-75]} {Mouse: ENSMUSG00000036983, Tfb1m, transcription factor B1, mitochondrial, [RH, Score=230, Expect=1e-72]} {Dmel: FBgn0261381, mtTFB1, Mitochondrial Transcription Factor B1, [RH, Score=200, Expect=2e-61]} {Celegans: WBGene00020189, tfbm-1, Dimethyladenosine transferase 1, mitochondrial, [RH, Score=243, Expect=1e-77]} {Smed: dd_Smed_v6_8684_0_1, dd_Smed_v6_8684_0_1, [RH, Score=283, Expect=4e-93]} {RNA1509_31959, RNA1509_57587} {RNA1310_25999, RNA1509_57587} {RNA1509_57587, RNA815_11217} |
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