Data search
Results for MligTC455_18762
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18762 | 32 | 0.68 | Mlig455_065265 | Neo: - Age: - |
ANK1 | Mlig455_065265 {REF} {Length: 4359} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=267.6]; Ankyrin repeats (many copies) [PF13637.8, score=187.6]; Ankyrin repeat [PF00023.32, score=184.8]; Ankyrin repeats (many copies) [PF13857.8, score=167.0]; Ankyrin repeat [PF13606.8, score=145.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=271, Expect=5e-74]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=257, Expect=1e-69]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=229, Expect=2e-60]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=233, Expect=4e-62]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=218, Expect=5e-59]} {RNA1509_24588} {RNA1310_27979} {RNA815_13672} |
Cumulative graph for MligTC455_18762
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.464 | 0.986 | 0.99995 | 1.00000 | |
| RegionR2 | 0.92 | 0.986 | 0.99996 | 1.00000 | |
| RegionR3 | -0.398 | 0.986 | 0.99993 | 1.00000 | |
| RegionR4 | -0.76 | 0.986 | 0.99983 | 1.00000 | |
| RegionR5 | -0.817 | 0.986 | 0.99985 | 1.00000 | |
| RegionR6 | -0.287 | 0.986 | 0.99997 | 1.00000 | |
| RegionR7 | 0.442 | 0.986 | 0.99995 | 1.00000 | |
| RegionR8 | 0.436 | 0.986 | 0.99995 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.003 | 0.986 | 0.99997 | 1.00000 | |
| RegenerationR2 | 4.298 | 0.986 | 0.00297 | 0.08310 | |
| RegenerationR3 | 4.588 | 0.986 | 0.03035 | 0.31167 | |
| RegenerationR4 | 4.646 | 0.986 | 0.02625 | 0.26036 | |
| RegenerationR5 | 5.012 | 0.986 | 0.00486 | 0.12655 | |
| RegenerationR6 | 5.883 | 0.986 | 0.00331 | 0.06762 | |
| RegenerationBL | 0.795 | 0.986 | 0.99997 | 1.00000 | |
| RegenerationTP | 0.309 | 0.986 | 1.00000 | 1.00000 |
Genes with expression patterns similar to MligTC455_18762
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18762 | 32 | 0.68 | Mlig455_065265 | Neo: - Age: - |
ANK1 | 2 | - | - | - | - | 1.000 | 1.000 | Mlig455_065265 {REF} {Length: 4359} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=267.6]; Ankyrin repeats (many copies) [PF13637.8, score=187.6]; Ankyrin repeat [PF00023.32, score=184.8]; Ankyrin repeats (many copies) [PF13857.8, score=167.0]; Ankyrin repeat [PF13606.8, score=145.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=271, Expect=5e-74]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=257, Expect=1e-69]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=229, Expect=2e-60]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=233, Expect=4e-62]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=218, Expect=5e-59]} {RNA1509_24588} {RNA1310_27979} {RNA815_13672} |
| 2. | MligTC455_27860 | 132 | 2.75 | Mlig455_028348 | Neo: - Age: Down-Up-Up Region-enriched R5: 3.575/0.00470 |
0.988 | - | - | - | - | - | 0.988 | Mlig455_028348 {REF} {Length: 2024} {RNA1310_45498} {RNA815_15412} | |
| 3. | MligTC455_53291 | 317 | 6.59 | Mlig455_028908 | Neo: - Age: - |
ATG4D | 0.976 | - | - | - | - | 0.976 | - | Mlig455_028908 {REF} {Length: 2631} {TRANSSPLICED} {Pfam: Peptidase family C54 [PF03416.21, score=151.3]} {Human: ENSG00000130734, ATG4D, autophagy related 4D cysteine peptidase, [Score=115, Expect=5e-27]} {Mouse: ENSMUSG00000002820, Atg4d, autophagy related 4D, cysteine peptidase, [Score=112, Expect=2e-26]; ENSMUSG00000116318, Atg4a, autophagy related 4A, cysteine peptidase, [Score=109, Expect=1e-25]; ENSMUSG00000079418, Atg4a, autophagy related 4A, cysteine peptidase, [Score=109, Expect=1e-25]; ENSMUSG00000026280, Atg4b, autophagy related 4B, cysteine peptidase, [Score=108, Expect=3e-25]; ENSMUSG00000087119, Atg4a-ps, autophagy related 4A, pseudogene, [Score=108, Expect=2e-25]} {Dmel: FBgn0038325, Atg4b, Autophagy-related 4b, [Score=112, Expect=5e-26]} {Celegans: WBGene00013595, atg-4.1, Cysteine protease, [Score=117, Expect=2e-28]} {Smed: dd_Smed_v6_6720_0_1, dd_Smed_v6_6720_0_1, [Score=117, Expect=1e-28]} {RNA1509_30649} {RNA1310_14296, RNA1509_30649} {RNA1509_30649, RNA815_16224} |
| 4. | MligTC455_49992 | 377 | 7.85 | Mlig455_030016 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_030016 {REF} {Length: 5191} {TRANSSPLICED} {RNA1509_16544, RNA1509_31079, RNA1509_38970} {RNA1310_6208.1, RNA1509_16544, RNA1509_31079, RNA1509_38970} {RNA1509_16544, RNA1509_31079, RNA1509_38970, RNA815_18742} | |
| 5. | MligTC455_35837 | 20 | 0.43 | Mlig455_050733, Mlig455_050742 | Neo: - Age: - |
SLC6A2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_050733 {REF} {Length: 2445} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=693.3]} {Human: ENSG00000103546, SLC6A2, solute carrier family 6 member 2, [RH, Score=606, Expect=0.0]; ENSG00000142319, SLC6A3, solute carrier family 6 member 3, [RH, Score=582, Expect=0.0]; ENSG00000276996, SLC6A3, solute carrier family 6 member 3, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000055368, Slc6a2, solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2, [RH, Score=607, Expect=0.0]; ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0034136, DAT, Dopamine transporter, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_17986_0_1, dd_Smed_v6_17986_0_1, [Score=732, Expect=0.0]} {RNA1509_10666} {RNA1310_45533} {RNA815_36799} Mlig455_050742 {REF} {Length: 6785} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=706.3]} {Human: ENSG00000103546, SLC6A2, solute carrier family 6 member 2, [RH, Score=614, Expect=0.0]; ENSG00000276996, SLC6A3, solute carrier family 6 member 3, [RH, Score=591, Expect=0.0]; ENSG00000142319, SLC6A3, solute carrier family 6 member 3, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000055368, Slc6a2, solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2, [RH, Score=612, Expect=0.0]; ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [RH, Score=601, Expect=0.0]} {Dmel: FBgn0034136, DAT, Dopamine transporter, [RH, Score=711, Expect=0.0]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [RH, Score=597, Expect=0.0]} {Smed: dd_Smed_v6_17986_0_1, dd_Smed_v6_17986_0_1, [RH, Score=751, Expect=0.0]} {RNA1509_10666} {RNA1310_45533} {RNA815_36799} |
| 6. | MligTC455_28805 | 26 | 0.54 | Mlig455_006382, Mlig455_011945 | Neo: - Age: Down-Down-Up |
CRB2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_006382 {REF} {Length: 1183} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=20.2]} {RNA1509_18097} {RNA1310_495.1} {RNA815_13065} Mlig455_011945 {REF} {Length: 4613} {Pfam: EGF-like domain [PF00008.29, score=69.1]; Human growth factor-like EGF [PF12661.9, score=31.1]; EGF-like domain [PF07974.15, score=30.1]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=122, Expect=4e-28]; ENSG00000134250, NOTCH2, notch 2, [Score=121, Expect=1e-27]; ENSG00000148400, NOTCH1, notch 1, [Score=120, Expect=2e-27]; ENSG00000275555, DLL1, delta like canonical Notch ligand 1, [Score=117, Expect=2e-26]; ENSG00000198719, DLL1, delta like canonical Notch ligand 1, [Score=117, Expect=2e-26]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=125, Expect=6e-29]; ENSMUSG00000027878, Notch2, notch 2, [Score=122, Expect=3e-28]; ENSMUSG00000026923, Notch1, notch 1, [Score=121, Expect=9e-28]} {Dmel: FBgn0259685, crb, crumbs, [Score=135, Expect=2e-32]} {Celegans: WBGene00000792, crb-1, Drosophila CRumBs homolog, [Score=108, Expect=6e-24]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=113, Expect=1e-25]} {RNA1509_35846} {RNA1310_9600.1} {RNA815_3985.1} |
| 7. | MligTC455_18864 | 264 | 5.51 | Mlig455_022625 | Neo: - Age: Up-Down-Down |
ADAMTS9 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_022625 {REF} {Length: 7325} {Pfam: Thrombospondin type 1 domain [PF19030.2, score=314.8]; GON domain [PF08685.13, score=123.9]; Thrombospondin type 1 domain [PF00090.21, score=89.6]; ADAM cysteine-rich domain [PF17771.3, score=56.1]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=31.0]; Metallo-peptidase family M12 [PF13688.8, score=21.8]; Spondin-like TSP1 domain [PF19028.2, score=20.0]} {Human: ENSG00000163638, ADAMTS9, ADAM metallopeptidase with thrombospondin type 1 motif 9, [RH, Score=544, Expect=9e-160]} {Mouse: ENSMUSG00000030022, Adamts9, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9, [RH, Score=539, Expect=4e-158]} {Dmel: FBgn0038341, AdamTS-A, ADAM metallopeptidase with thrombospondin type 1 motif A, [RH, Score=275, Expect=5e-74]} {Celegans: WBGene00001650, gon-1, A disintegrin and metalloproteinase with thrombospondin motifs gon-1, [RH, Score=521, Expect=2e-151]} {Smed: dd_Smed_v6_10259_0_1, dd_Smed_v6_10259_0_1, [Score=329, Expect=1e-91]} {RNA1509_17892} {RNA1310_1039.1} {RNA815_710} |
| 8. | MligTC455_08633 | 45 | 0.93 | Mlig455_012424 | Neo: - Age: - Region-enriched R4: 6.767/0.01731 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_012424 {REF} {Length: 975} {TRANSSPLICED} {RNA1509_43208} {RNA1310_19732} {RNA815_10956} | |
| 9. | MligTC455_28470 | 659 | 13.73 | Mlig455_025502 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.352 Region-enriched R6: 2.860/0.00000 |
PRKG1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_025502 {REF} {Length: 4819} {Pfam: Protein kinase domain [PF00069.27, score=237.3]; Cyclic nucleotide-binding domain [PF00027.31, score=126.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=122.9]; Kinase-like [PF14531.8, score=23.7]; Coiled-coil N-terminus of cGMP-dependent protein kinase [PF16808.7, score=22.2]; HOOK protein coiled-coil region [PF05622.14, score=20.7]} {Human: ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [RH, Score=811, Expect=0.0]} {Mouse: ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [RH, Score=811, Expect=0.0]} {Dmel: FBgn0000721, for, foraging, [RH, Score=810, Expect=0.0]} {Celegans: WBGene00001173, egl-4, cGMP-dependent protein kinase egl-4, [RH, Score=673, Expect=0.0]} {Smed: dd_Smed_v6_7139_0_1, dd_Smed_v6_7139_0_1, [RH, Score=863, Expect=0.0]} {RNA1509_17664, RNA1509_25015} {RNA1310_6741.2, RNA1509_17664, RNA1509_25015} {RNA1509_17664, RNA1509_25015, RNA815_2348.1} |
Berezikov Lab - 2020-2021 © ERIBA