Data search
Results for MligTC455_53310
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53310 | 194 | 4.04 | Mlig455_046031, Mlig455_055213 | Neo: - Age: - |
WARS | Mlig455_046031 {REF} {Length: 2931} {TRANSSPLICED} {tRNA: Val(AAC),pseudo, score=25.6} {Pfam: tRNA synthetases class I (W and Y) [PF00579.27, score=79.1]} {Human: ENSG00000140105, WARS, tryptophanyl-tRNA synthetase, [RH, Score=612, Expect=0.0]} {Mouse: ENSMUSG00000021266, Wars, tryptophanyl-tRNA synthetase, [RH, Score=606, Expect=0.0]} {Dmel: FBgn0010803, TrpRS, Tryptophanyl-tRNA synthetase, [RH, Score=533, Expect=0.0]} {Celegans: WBGene00006945, wars-1, Tryptophanyl(W) Amino-acyl tRNA Synthetase; Tryptophanyl-tRNA synthetase (Cytosolic), [RH, Score=510, Expect=0.0]} {Smed: dd_Smed_v6_2435_0_1, dd_Smed_v6_2435_0_1, [RH, Score=434, Expect=6e-146]} {RNA1509_47035} {RNA1310_16401.1} {RNA815_9552} Mlig455_055213 {REF} {Length: 2481} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=21.4} {Pfam: tRNA synthetases class I (W and Y) [PF00579.27, score=81.3]} {Human: ENSG00000140105, WARS, tryptophanyl-tRNA synthetase, [RH, Score=612, Expect=0.0]} {Mouse: ENSMUSG00000021266, Wars, tryptophanyl-tRNA synthetase, [RH, Score=607, Expect=0.0]} {Dmel: FBgn0010803, TrpRS, Tryptophanyl-tRNA synthetase, [RH, Score=533, Expect=0.0]} {Celegans: WBGene00006945, wars-1, Tryptophanyl(W) Amino-acyl tRNA Synthetase; Tryptophanyl-tRNA synthetase (Cytosolic), [RH, Score=512, Expect=0.0]} {Smed: dd_Smed_v6_2435_0_1, dd_Smed_v6_2435_0_1, [RH, Score=437, Expect=5e-147]} {RNA1509_47035} {RNA1310_16401.1} {RNA815_9552} |
Cumulative graph for MligTC455_53310
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.03 | 2.747 | 0.31773 | 0.96731 | |
| RegionR2 | 1.463 | 2.747 | 0.27151 | 0.65608 | |
| RegionR3 | -0.107 | 2.747 | 0.88998 | 1.00000 | |
| RegionR4 | 0.454 | 2.747 | 0.68963 | 0.98141 | |
| RegionR5 | 1.645 | 2.747 | 0.08511 | 0.27316 | |
| RegionR6 | -0.369 | 2.747 | 0.94081 | 1.00000 | |
| RegionR7 | 0.496 | 2.747 | 0.69576 | 1.00000 | |
| RegionR8 | 1.447 | 2.747 | 0.32482 | 0.95723 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.493 | 2.747 | 0.99994 | 1.00000 | |
| RegenerationR2 | 0.433 | 2.747 | 0.61986 | 0.92329 | |
| RegenerationR3 | 1.655 | 2.747 | 0.11472 | 0.52860 | |
| RegenerationR4 | 0.706 | 2.747 | 0.49769 | 0.86820 | |
| RegenerationR5 | 0.238 | 2.747 | 0.78577 | 0.98358 | |
| RegenerationR6 | 2.347 | 2.747 | 0.03009 | 0.21659 | |
| RegenerationBL | 0.688 | 2.747 | 0.55082 | 0.90760 | |
| RegenerationTP | 1.197 | 2.747 | 0.29795 | 0.74326 |
Genes with expression patterns similar to MligTC455_53310
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53310 | 194 | 4.04 | Mlig455_046031, Mlig455_055213 | Neo: - Age: - |
WARS | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046031 {REF} {Length: 2931} {TRANSSPLICED} {tRNA: Val(AAC),pseudo, score=25.6} {Pfam: tRNA synthetases class I (W and Y) [PF00579.27, score=79.1]} {Human: ENSG00000140105, WARS, tryptophanyl-tRNA synthetase, [RH, Score=612, Expect=0.0]} {Mouse: ENSMUSG00000021266, Wars, tryptophanyl-tRNA synthetase, [RH, Score=606, Expect=0.0]} {Dmel: FBgn0010803, TrpRS, Tryptophanyl-tRNA synthetase, [RH, Score=533, Expect=0.0]} {Celegans: WBGene00006945, wars-1, Tryptophanyl(W) Amino-acyl tRNA Synthetase; Tryptophanyl-tRNA synthetase (Cytosolic), [RH, Score=510, Expect=0.0]} {Smed: dd_Smed_v6_2435_0_1, dd_Smed_v6_2435_0_1, [RH, Score=434, Expect=6e-146]} {RNA1509_47035} {RNA1310_16401.1} {RNA815_9552} Mlig455_055213 {REF} {Length: 2481} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=21.4} {Pfam: tRNA synthetases class I (W and Y) [PF00579.27, score=81.3]} {Human: ENSG00000140105, WARS, tryptophanyl-tRNA synthetase, [RH, Score=612, Expect=0.0]} {Mouse: ENSMUSG00000021266, Wars, tryptophanyl-tRNA synthetase, [RH, Score=607, Expect=0.0]} {Dmel: FBgn0010803, TrpRS, Tryptophanyl-tRNA synthetase, [RH, Score=533, Expect=0.0]} {Celegans: WBGene00006945, wars-1, Tryptophanyl(W) Amino-acyl tRNA Synthetase; Tryptophanyl-tRNA synthetase (Cytosolic), [RH, Score=512, Expect=0.0]} {Smed: dd_Smed_v6_2435_0_1, dd_Smed_v6_2435_0_1, [RH, Score=437, Expect=5e-147]} {RNA1509_47035} {RNA1310_16401.1} {RNA815_9552} |
| 2. | MligTC455_52438 | 102 | 2.13 | Mlig455_053571 | Neo: - Age: - |
1.738 | 0.780 | - | - | - | - | 0.958 | Mlig455_053571 {REF} {Length: 2421} {TRANSSPLICED} {RNA1509_22620} {RNA1310_9393.3} {RNA815_16638} | |
| 3. | MligTC455_52388 | 772 | 16.08 | Mlig455_012400 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_012400 {REF} {Length: 4789} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=47.9]; F-box domain [PF00646.35, score=33.3]} {Dmel: FBgn0052085, CG32085, [Score=49.3, Expect=7e-06]} {RNA1509_11496} {RNA1310_13241, RNA1509_11496} {RNA1509_11496, RNA815_4939} | |
| 4. | MligTC455_23355 | 380 | 7.91 | Mlig455_047433 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.922/0.03999 Regeneration-upregulated BL: 4.169 Regeneration-enriched BL: 4.169 |
GEMIN5 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_047433 {REF} {Length: 4789} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=284, Expect=2e-77]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [RH, Score=290, Expect=1e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=57.4, Expect=4e-08]} {RNA1509_10687} {RNA1310_1434.1} {RNA815_13032} |
| 5. | MligTC455_31569 | 70 | 1.46 | Mlig455_011456 | Neo: - Age: Down-Up-Down |
OXCT1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_011456 {REF} {Length: 2711} {Pfam: Coenzyme A transferase [PF01144.25, score=283.7]} {Human: ENSG00000083720, OXCT1, 3-oxoacid CoA-transferase 1, [Score=449, Expect=7e-154]; ENSG00000198754, OXCT2, 3-oxoacid CoA-transferase 2, [Score=439, Expect=7e-150]} {Mouse: ENSMUSG00000022186, Oxct1, 3-oxoacid CoA transferase 1, [Score=441, Expect=4e-151]; ENSMUSG00000076438, Oxct2b, 3-oxoacid CoA transferase 2B, [Score=437, Expect=2e-149]; ENSMUSG00000076436, Oxct2a, 3-oxoacid CoA transferase 2A, [Score=437, Expect=1e-149]} {Dmel: FBgn0035298, SCOT, Succinyl-CoA:3-ketoacid CoA transferase, [Score=432, Expect=9e-148]} {Celegans: WBGene00007330, C05C10.3, Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial, [Score=434, Expect=3e-148]} {Smed: dd_Smed_v6_1189_0_1, dd_Smed_v6_1189_0_1, [Score=434, Expect=2e-148]} {RNA1509_51978} {RNA1310_18776, RNA1509_51978} {RNA1509_51978, RNA815_35438} |
| 6. | MligTC455_32034 | 109 | 2.27 | Mlig455_067837 | Neo: - Age: - |
MAPK14 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_067837 {REF} {Length: 1754} {Pfam: Protein kinase domain [PF00069.27, score=191.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=94.3]; Phosphotransferase enzyme family [PF01636.25, score=21.4]} {Human: ENSG00000112062, MAPK14, mitogen-activated protein kinase 14, [Score=218, Expect=2e-67]; ENSG00000050748, MAPK9, mitogen-activated protein kinase 9, [Score=216, Expect=2e-66]; ENSG00000156711, MAPK13, mitogen-activated protein kinase 13, [Score=214, Expect=1e-65]} {Mouse: ENSMUSG00000053436, Mapk14, mitogen-activated protein kinase 14, [Score=218, Expect=1e-67]; ENSMUSG00000020366, Mapk9, mitogen-activated protein kinase 9, [Score=217, Expect=7e-67]; ENSMUSG00000004864, Mapk13, mitogen-activated protein kinase 13, [Score=212, Expect=4e-65]; ENSMUSG00000022610, Mapk12, mitogen-activated protein kinase 12, [Score=209, Expect=7e-64]} {Dmel: FBgn0024846, p38b, p38b MAP kinase, [Score=218, Expect=1e-67]} {Celegans: WBGene00004055, pmk-1, Mitogen-activated protein kinase pmk-1, [Score=218, Expect=1e-67]} {Smed: dd_Smed_v6_1282_0_1, dd_Smed_v6_1282_0_1, [Score=211, Expect=8e-65]} {RNA1509_37050} {RNA1310_4000, RNA1509_37050} {RNA1509_37050, RNA815_22331} |
| 7. | MligTC455_07921 | 38 | 0.78 | Mlig455_029239 | Neo: - Age: - Region-enriched R6: 4.158/0.01882 |
OSR1 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_029239 {REF} {Length: 1330} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.3]; Zinc-finger double domain [PF13465.8, score=46.1]; C2H2-type zinc finger [PF13894.8, score=40.7]; C2H2-type zinc finger [PF13912.8, score=28.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.8]} {Human: ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [RH, Score=179, Expect=5e-55]; ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [RH, Score=177, Expect=6e-54]} {Mouse: ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [RH, Score=176, Expect=4e-54]; ENSMUSG00000022330, Osr2, odd-skipped related 2, [RH, Score=176, Expect=3e-54]} {Dmel: FBgn0002985, odd, odd skipped, [RH, Score=158, Expect=4e-46]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [RH, Score=169, Expect=7e-52]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [RH, Score=189, Expect=3e-59]} {RNA1509_57522} {RNA1310_38770} {RNA815_13682.1} |
| 8. | MligTC455_03891 | 123 | 2.56 | Mlig455_050023 | Neo: - Age: - |
IMMP2L | 0.953 | - | - | 0.953 | - | - | - | Mlig455_050023 {REF} {Length: 3094} {TRANSSPLICED} {Pfam: Signal peptidase, peptidase S26 [PF10502.11, score=30.2]} {Human: ENSG00000184903, IMMP2L, inner mitochondrial membrane peptidase subunit 2, [RH, Score=53.9, Expect=4e-08]} {Dmel: FBgn0034535, CG11110, [RH, Score=53.5, Expect=3e-08]} {RNA1509_29174} {RNA1310_34623} {RNA815_15967} |
| 9. | MligTC455_30301 | 831 | 17.3 | Mlig455_007156 | Neo: Neoblast, stringent Age: Up-Down-Down |
SMC4 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_007156 {REF} {Length: 5128} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=234.4]; SMC proteins Flexible Hinge Domain [PF06470.15, score=84.9]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=52.2]; AAA ATPase domain [PF13175.8, score=29.6]; AAA domain [PF13476.8, score=22.0]; P-loop containing region of AAA domain [PF13555.8, score=21.6]} {Human: ENSG00000113810, SMC4, structural maintenance of chromosomes 4, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000034349, Smc4, structural maintenance of chromosomes 4, [RH, Score=670, Expect=0.0]} {Dmel: FBgn0015391, glu, gluon, [RH, Score=533, Expect=6e-164]} {Celegans: WBGene00004874, smc-4, Structural maintenance of chromosomes protein 4, [RH, Score=348, Expect=4e-98]} {Smed: dd_Smed_v6_5865_0_4, dd_Smed_v6_5865_0_4, [RH, Score=544, Expect=3e-169]} {RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936} {RNA1310_1138.1, RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936} {RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936, RNA815_2120} |
| 10. | MligTC455_43952 | 230 | 4.79 | Mlig455_068335 | Neo: Int S/G2/M Age: - |
NEMP1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_068335 {REF} {Length: 1736} {Pfam: NEMP family [PF10225.11, score=60.7]} {Human: ENSG00000166881, NEMP1, nuclear envelope integral membrane protein 1, [Score=66.6, Expect=1e-12]} {Mouse: ENSMUSG00000043015, Nemp2, nuclear envelope integral membrane protein 2, [Score=55.1, Expect=9e-09]} {RNA1509_42654} {RNA1310_10680} {RNA815_32705} |
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