Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_53328 | 881 | 18.35 | Mlig455_028586, Mlig455_056916 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.648 Region-enriched R5: 2.442/0.00005 |
VARS2 | Mlig455_028586 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=493.4]; tRNA synthetases class I (M) [PF09334.13, score=54.0]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=44.5]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=577, Expect=0.0]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=574, Expect=0.0]; ENSG00000231945, VARS, valyl-tRNA synthetase, [Score=560, Expect=0.0]; ENSG00000204394, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000224264, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000226589, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000096171, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000231116, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=578, Expect=0.0]; ENSMUSG00000007029, Vars, valyl-tRNA synthetase, [Score=561, Expect=0.0]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=589, Expect=0.0]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=541, Expect=3e-177]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1} Mlig455_056916 {REF} {Length: 4706} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=368.3]; tRNA synthetases class I (M) [PF09334.13, score=27.3]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=18.7]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=2e-145]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=6e-145]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=4e-145]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=3e-145]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=7e-145]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=453, Expect=1e-146]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=464, Expect=3e-151]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=459, Expect=3e-149]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=416, Expect=7e-133]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -5.896 | 4.557 | 0.14296 | 0.75312 | |
RegionR2 | 0.414 | 4.557 | 0.64077 | 0.97847 | |
RegionR3 | 1.397 | 4.557 | 0.03904 | 0.34398 | |
RegionR4 | 1.621 | 4.557 | 0.03073 | 0.13816 | |
RegionR5 | 2.442 | 4.557 | 0.00000 | 0.00005 | |
RegionR6 | 0.753 | 4.557 | 0.36840 | 0.94954 | |
RegionR7 | 0.768 | 4.557 | 0.42057 | 1.00000 | |
RegionR8 | -1.499 | 4.557 | 0.99639 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 7.004 | 4.557 | 0.05290 | 0.70520 | |
RegenerationR2 | 0.413 | 4.557 | 0.32188 | 0.75963 | |
RegenerationR3 | -0.385 | 4.557 | 0.38495 | 0.79301 | |
RegenerationR4 | 0.395 | 4.557 | 0.39549 | 0.81041 | |
RegenerationR5 | -0.379 | 4.557 | 0.34388 | 0.76026 | |
RegenerationR6 | -0.169 | 4.557 | 0.71456 | 0.93252 | |
RegenerationBL | 1.216 | 4.557 | 0.04923 | 0.25499 | |
RegenerationTP | 1.663 | 4.557 | 0.02406 | 0.26322 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_53328 | 881 | 18.35 | Mlig455_028586, Mlig455_056916 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.648 Region-enriched R5: 2.442/0.00005 |
VARS2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028586 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=493.4]; tRNA synthetases class I (M) [PF09334.13, score=54.0]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=44.5]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=577, Expect=0.0]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=574, Expect=0.0]; ENSG00000231945, VARS, valyl-tRNA synthetase, [Score=560, Expect=0.0]; ENSG00000204394, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000224264, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000226589, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000096171, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000231116, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=578, Expect=0.0]; ENSMUSG00000007029, Vars, valyl-tRNA synthetase, [Score=561, Expect=0.0]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=589, Expect=0.0]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=541, Expect=3e-177]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1} Mlig455_056916 {REF} {Length: 4706} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=368.3]; tRNA synthetases class I (M) [PF09334.13, score=27.3]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=18.7]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=2e-145]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=6e-145]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=4e-145]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=3e-145]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=7e-145]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=453, Expect=1e-146]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=464, Expect=3e-151]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=459, Expect=3e-149]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=416, Expect=7e-133]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1} |
2. | MligTC455_53329 | 299 | 6.23 | Mlig455_028603 | Neo: - Age: - Region-enriched R5: 3.183/0.00002 |
ST5 | 4.122 | - | 0.793 | 0.745 | 0.773 | 0.861 | 0.950 | Mlig455_028603 {REF} {Length: 7086} {Pfam: DENN (AEX-3) domain [PF02141.23, score=131.7]; uDENN domain [PF03456.20, score=38.2]} {Human: ENSG00000166444, ST5, suppression of tumorigenicity 5, [RH, Score=213, Expect=3e-56]} {Mouse: ENSMUSG00000031024, St5, suppression of tumorigenicity 5, [RH, Score=212, Expect=7e-56]} {Dmel: FBgn0027561, CG18659, [Score=90.1, Expect=5e-18]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [Score=72.8, Expect=1e-12]} {Smed: dd_Smed_v6_7244_0_2, dd_Smed_v6_7244_0_2, [Score=78.2, Expect=2e-14]} {RNA1509_21610} {RNA1310_5403.1} {RNA815_496.1} |
3. | MligTC455_03370 | 378 | 7.87 | Mlig455_065258 | Neo: - Age: - |
CYB561D1 | 1.77 | - | - | - | - | 0.804 | 0.966 | Mlig455_065258 {REF} {Length: 898} {TRANSSPLICED} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=98.2]} {Human: ENSG00000174151, CYB561D1, cytochrome b561 family member D1, [RH, Score=116, Expect=1e-31]} {Mouse: ENSMUSG00000048796, Cyb561d1, cytochrome b-561 domain containing 1, [RH, Score=113, Expect=9e-31]} {Smed: dd_Smed_v6_11156_0_1, dd_Smed_v6_11156_0_1, [RH, Score=77.4, Expect=2e-17]} {RNA1509_7074} {RNA1310_43066} {RNA815_21777} |
4. | MligTC455_51635 | 152 | 3.17 | Mlig455_042974 | Neo: - Age: Down-Up-Down |
DTWD1 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_042974 {REF} {Length: 1468} {TRANSSPLICED} {Pfam: DTW domain [PF03942.17, score=92.4]} {Human: ENSG00000104047, DTWD1, DTW domain containing 1, [RH, Score=157, Expect=4e-44]} {Mouse: ENSMUSG00000023330, Dtwd1, DTW domain containing 1, [RH, Score=172, Expect=4e-50]} {Dmel: FBgn0039664, CG2006, [RH, Score=129, Expect=6e-34]} {Celegans: WBGene00175030, Y53C12A.10, [RH, Score=102, Expect=9e-25]} {Smed: dd_Smed_v6_7274_0_1, dd_Smed_v6_7274_0_1, [RH, Score=160, Expect=1e-46]} {RNA1509_34738} {RNA1310_45995.1} {RNA815_42663} |
5. | MligTC455_23156 | 88 | 1.83 | Mlig455_048448 | Neo: - Age: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_048448 {REF} {Length: 3286} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=26.5]; Eukaryotic translation initiation factor 2 alpha subunit [PF07541.14, score=24.8]} {RNA1509_17687} {RNA1310_16014.1} {RNA815_8001} | |
6. | MligTC455_41086 | 452 | 9.42 | Mlig455_022719 | Neo: - Age: - Region-enriched R5: 1.033/0.01986 |
FKBPL | 0.958 | - | - | - | - | - | 0.958 | Mlig455_022719 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=33.3]; Tetratricopeptide repeat [PF00515.30, score=28.4]} {Human: ENSG00000224200, FKBPL, FK506 binding protein like, [Score=56.2, Expect=2e-08]; ENSG00000204315, FKBPL, FK506 binding protein like, [Score=56.2, Expect=2e-08]; ENSG00000223666, FKBPL, FK506 binding protein like, [Score=56.2, Expect=2e-08]; ENSG00000230907, FKBPL, FK506 binding protein like, [Score=56.2, Expect=2e-08]} {Mouse: ENSMUSG00000030357, Fkbp4, FK506 binding protein 4, [Score=60.8, Expect=5e-10]} {Smed: dd_Smed_v6_5206_0_1, dd_Smed_v6_5206_0_1, [Score=52.8, Expect=8e-08]} {RNA1509_15529, RNA1509_19915, RNA1509_59116} {RNA1310_28978, RNA1509_15529, RNA1509_19915, RNA1509_59116} {RNA1509_15529, RNA1509_19915, RNA1509_59116, RNA815_12287} |
7. | MligTC455_46293 | 388 | 8.09 | Mlig455_024975 | Neo: - Age: - Region-enriched R5: 1.866/0.00003 |
SLC17A9 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_024975 {REF} {Length: 2858} {Pfam: Major Facilitator Superfamily [PF07690.18, score=153.6]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=313, Expect=5e-101]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=308, Expect=5e-99]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [RH, Score=334, Expect=5e-109]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=310, Expect=7e-100]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [RH, Score=416, Expect=3e-141]} {RNA1509_7549} {RNA1310_6054.1} {RNA815_2086.1} |
8. | MligTC455_42531 | 336 | 7 | Mlig455_030594 | Neo: Int S/G2/M Age: Down-Up-Up |
ABT1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_030594 {REF} {Length: 1307} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=19.4]} {Human: ENSG00000146109, ABT1, activator of basal transcription 1, [RH, Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000036376, Abt1, activator of basal transcription 1, [RH, Score=102, Expect=8e-26]} {Dmel: FBgn0052708, CG32708, [RH, Score=97.4, Expect=2e-24]} {Celegans: WBGene00019005, F57B10.8, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_1929_0_1, dd_Smed_v6_1929_0_1, [RH, Score=101, Expect=2e-26]} {RNA1509_15723} {RNA1310_48173.1} {RNA815_22694} |