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Results for MligTC455_53328

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53328 881 18.35 Mlig455_028586, Mlig455_056916

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.648

Region-enriched R5: 2.442/0.00005

VARS2

Mlig455_028586 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=493.4]; tRNA synthetases class I (M) [PF09334.13, score=54.0]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=44.5]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=577, Expect=0.0]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=574, Expect=0.0]; ENSG00000231945, VARS, valyl-tRNA synthetase, [Score=560, Expect=0.0]; ENSG00000204394, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000224264, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000226589, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000096171, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000231116, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=578, Expect=0.0]; ENSMUSG00000007029, Vars, valyl-tRNA synthetase, [Score=561, Expect=0.0]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=589, Expect=0.0]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=541, Expect=3e-177]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1}

Mlig455_056916 {REF} {Length: 4706} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=368.3]; tRNA synthetases class I (M) [PF09334.13, score=27.3]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=18.7]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=2e-145]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=6e-145]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=4e-145]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=3e-145]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=7e-145]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=453, Expect=1e-146]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=464, Expect=3e-151]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=459, Expect=3e-149]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=416, Expect=7e-133]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1}

Cumulative graph for MligTC455_53328

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.896 4.557 0.14296 0.75312
RegionR2 0.414 4.557 0.64077 0.97847
RegionR3 1.397 4.557 0.03904 0.34398
RegionR4 1.621 4.557 0.03073 0.13816
RegionR5 2.442 4.557 0.00000 0.00005
RegionR6 0.753 4.557 0.36840 0.94954
RegionR7 0.768 4.557 0.42057 1.00000
RegionR8 -1.499 4.557 0.99639 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.004 4.557 0.05290 0.70520
RegenerationR2 0.413 4.557 0.32188 0.75963
RegenerationR3 -0.385 4.557 0.38495 0.79301
RegenerationR4 0.395 4.557 0.39549 0.81041
RegenerationR5 -0.379 4.557 0.34388 0.76026
RegenerationR6 -0.169 4.557 0.71456 0.93252
RegenerationBL 1.216 4.557 0.04923 0.25499
RegenerationTP 1.663 4.557 0.02406 0.26322


Genes with expression patterns similar to MligTC455_53328

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53328 881 18.35 Mlig455_028586, Mlig455_056916

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.648

Region-enriched R5: 2.442/0.00005

VARS2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_028586 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=493.4]; tRNA synthetases class I (M) [PF09334.13, score=54.0]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=44.5]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=577, Expect=0.0]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=574, Expect=0.0]; ENSG00000231945, VARS, valyl-tRNA synthetase, [Score=560, Expect=0.0]; ENSG00000204394, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000224264, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000226589, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000096171, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000231116, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=578, Expect=0.0]; ENSMUSG00000007029, Vars, valyl-tRNA synthetase, [Score=561, Expect=0.0]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=589, Expect=0.0]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=541, Expect=3e-177]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1}

Mlig455_056916 {REF} {Length: 4706} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=368.3]; tRNA synthetases class I (M) [PF09334.13, score=27.3]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=18.7]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=2e-145]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=6e-145]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=4e-145]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=3e-145]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=7e-145]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=453, Expect=1e-146]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=464, Expect=3e-151]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=459, Expect=3e-149]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=416, Expect=7e-133]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1}
2. MligTC455_53329 299 6.23 Mlig455_028603

Neo: -

Age: -

Region-enriched R5: 3.183/0.00002

ST5 4.122 - 0.793 0.745 0.773 0.861 0.950 Mlig455_028603 {REF} {Length: 7086} {Pfam: DENN (AEX-3) domain [PF02141.23, score=131.7]; uDENN domain [PF03456.20, score=38.2]} {Human: ENSG00000166444, ST5, suppression of tumorigenicity 5, [RH, Score=213, Expect=3e-56]} {Mouse: ENSMUSG00000031024, St5, suppression of tumorigenicity 5, [RH, Score=212, Expect=7e-56]} {Dmel: FBgn0027561, CG18659, [Score=90.1, Expect=5e-18]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [Score=72.8, Expect=1e-12]} {Smed: dd_Smed_v6_7244_0_2, dd_Smed_v6_7244_0_2, [Score=78.2, Expect=2e-14]} {RNA1509_21610} {RNA1310_5403.1} {RNA815_496.1}
3. MligTC455_03370 378 7.87 Mlig455_065258

Neo: -

Age: -

CYB561D1 1.77 - - - - 0.804 0.966 Mlig455_065258 {REF} {Length: 898} {TRANSSPLICED} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=98.2]} {Human: ENSG00000174151, CYB561D1, cytochrome b561 family member D1, [RH, Score=116, Expect=1e-31]} {Mouse: ENSMUSG00000048796, Cyb561d1, cytochrome b-561 domain containing 1, [RH, Score=113, Expect=9e-31]} {Smed: dd_Smed_v6_11156_0_1, dd_Smed_v6_11156_0_1, [RH, Score=77.4, Expect=2e-17]} {RNA1509_7074} {RNA1310_43066} {RNA815_21777}
4. MligTC455_51635 152 3.17 Mlig455_042974

Neo: -

Age: Down-Up-Down

DTWD1 0.962 - - - - - 0.962 Mlig455_042974 {REF} {Length: 1468} {TRANSSPLICED} {Pfam: DTW domain [PF03942.17, score=92.4]} {Human: ENSG00000104047, DTWD1, DTW domain containing 1, [RH, Score=157, Expect=4e-44]} {Mouse: ENSMUSG00000023330, Dtwd1, DTW domain containing 1, [RH, Score=172, Expect=4e-50]} {Dmel: FBgn0039664, CG2006, [RH, Score=129, Expect=6e-34]} {Celegans: WBGene00175030, Y53C12A.10, [RH, Score=102, Expect=9e-25]} {Smed: dd_Smed_v6_7274_0_1, dd_Smed_v6_7274_0_1, [RH, Score=160, Expect=1e-46]} {RNA1509_34738} {RNA1310_45995.1} {RNA815_42663}
5. MligTC455_23156 88 1.83 Mlig455_048448

Neo: -

Age: -

0.96 - - - - - 0.960 Mlig455_048448 {REF} {Length: 3286} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=26.5]; Eukaryotic translation initiation factor 2 alpha subunit [PF07541.14, score=24.8]} {RNA1509_17687} {RNA1310_16014.1} {RNA815_8001}
6. MligTC455_41086 452 9.42 Mlig455_022719

Neo: -

Age: -

Region-enriched R5: 1.033/0.01986

FKBPL 0.958 - - - - - 0.958 Mlig455_022719 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=33.3]; Tetratricopeptide repeat [PF00515.30, score=28.4]} {Human: ENSG00000224200, FKBPL, FK506 binding protein like, [Score=56.2, Expect=2e-08]; ENSG00000204315, FKBPL, FK506 binding protein like, [Score=56.2, Expect=2e-08]; ENSG00000223666, FKBPL, FK506 binding protein like, [Score=56.2, Expect=2e-08]; ENSG00000230907, FKBPL, FK506 binding protein like, [Score=56.2, Expect=2e-08]} {Mouse: ENSMUSG00000030357, Fkbp4, FK506 binding protein 4, [Score=60.8, Expect=5e-10]} {Smed: dd_Smed_v6_5206_0_1, dd_Smed_v6_5206_0_1, [Score=52.8, Expect=8e-08]} {RNA1509_15529, RNA1509_19915, RNA1509_59116} {RNA1310_28978, RNA1509_15529, RNA1509_19915, RNA1509_59116} {RNA1509_15529, RNA1509_19915, RNA1509_59116, RNA815_12287}
7. MligTC455_46293 388 8.09 Mlig455_024975

Neo: -

Age: -

Region-enriched R5: 1.866/0.00003

SLC17A9 0.952 - - - - - 0.952 Mlig455_024975 {REF} {Length: 2858} {Pfam: Major Facilitator Superfamily [PF07690.18, score=153.6]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=313, Expect=5e-101]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=308, Expect=5e-99]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [RH, Score=334, Expect=5e-109]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=310, Expect=7e-100]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [RH, Score=416, Expect=3e-141]} {RNA1509_7549} {RNA1310_6054.1} {RNA815_2086.1}
8. MligTC455_42531 336 7 Mlig455_030594

Neo: Int S/G2/M

Age: Down-Up-Up

ABT1 0.95 - - - - - 0.950 Mlig455_030594 {REF} {Length: 1307} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=19.4]} {Human: ENSG00000146109, ABT1, activator of basal transcription 1, [RH, Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000036376, Abt1, activator of basal transcription 1, [RH, Score=102, Expect=8e-26]} {Dmel: FBgn0052708, CG32708, [RH, Score=97.4, Expect=2e-24]} {Celegans: WBGene00019005, F57B10.8, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_1929_0_1, dd_Smed_v6_1929_0_1, [RH, Score=101, Expect=2e-26]} {RNA1509_15723} {RNA1310_48173.1} {RNA815_22694}

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