M. lignano Tomo-Seq
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Results for MligTC455_53517

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53517 231 4.82 Mlig455_045499

Neo: -

Age: -

 Mlig455_045499 {REF} {Length: 1485} {RNA1509_40794} {RNA1310_6041.1} {RNA815_19941}

Cumulative graph for MligTC455_53517

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.129 2.842 0.95225 1.00000
RegionR2 0.356 2.842 0.60339 0.95335
RegionR3 0.226 2.842 0.68452 1.00000
RegionR4 0.938 2.842 0.15070 0.40090
RegionR5 0.179 2.842 0.72595 1.00000
RegionR6 0.097 2.842 0.86855 1.00000
RegionR7 -1.956 2.842 0.10247 0.61034
RegionR8 0.031 2.842 0.97389 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.047 2.842 0.40318 1.00000
RegenerationR2 -0.223 2.842 0.65082 0.93678
RegenerationR3 0.397 2.842 0.46371 0.84023
RegenerationR4 0.649 2.842 0.24149 0.69044
RegenerationR5 0.714 2.842 0.13711 0.54743
RegenerationR6 0.965 2.842 0.08449 0.36366
RegenerationBL 1.651 2.842 0.03640 0.21531
RegenerationTP 0.858 2.842 0.41202 0.83839


Genes with expression patterns similar to MligTC455_53517

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53517 231 4.82 Mlig455_045499

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_045499 {REF} {Length: 1485} {RNA1509_40794} {RNA1310_6041.1} {RNA815_19941}
2. MligTC455_38448 390 8.12 Mlig455_064678

Neo: -

Age: Down-Down-Up

 0.957 0.957 - - - - - Mlig455_064678 {REF} {Length: 2178} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=33.8]} {Dmel: FBgn0263353, CG11000, [RH, Score=68.6, Expect=1e-12]} {Celegans: WBGene00009534, F38B7.3, [RH, Score=82.4, Expect=5e-17]} {Smed: dd_Smed_v6_4018_0_1, dd_Smed_v6_4018_0_1, [RH, Score=118, Expect=8e-30]} {RNA1509_10365} {RNA1310_20310, RNA1509_10365} {RNA1509_10365, RNA815_26365}
3. MligTC455_46972 188 3.91 Mlig455_053488

Neo: -

Age: -

 CNOT3 0.95 - - - 0.950 - - Mlig455_053488 {REF} {Length: 2868} {Pfam: Not1 N-terminal domain, CCR4-Not complex component [PF04065.17, score=261.8]; NOT2 / NOT3 / NOT5 family [PF04153.20, score=119.6]} {Human: ENSG00000088038, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=262, Expect=2e-76]; ENSG00000275979, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277615, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274176, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000273943, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277114, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274616, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000276082, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277600, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274941, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]} {Mouse: ENSMUSG00000035632, Cnot3, CCR4-NOT transcription complex, subunit 3, [RH, Score=211, Expect=2e-61]} {Dmel: FBgn0033029, Not3, CCR4-NOT transcription complex subunit 3, [RH, Score=265, Expect=1e-76]} {Celegans: WBGene00003826, ntl-3, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_5044_0_1, dd_Smed_v6_5044_0_1, [RH, Score=228, Expect=9e-65]} {RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173} {RNA1310_4741.1, RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173} {RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173, RNA815_11164}

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