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Results for MligTC455_46972

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46972 188 3.91 Mlig455_053488

Neo: -

Age: -

 CNOT3 Mlig455_053488 {REF} {Length: 2868} {Pfam: Not1 N-terminal domain, CCR4-Not complex component [PF04065.17, score=261.8]; NOT2 / NOT3 / NOT5 family [PF04153.20, score=119.6]} {Human: ENSG00000088038, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=262, Expect=2e-76]; ENSG00000275979, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277615, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274176, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000273943, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277114, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274616, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000276082, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277600, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274941, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]} {Mouse: ENSMUSG00000035632, Cnot3, CCR4-NOT transcription complex, subunit 3, [RH, Score=211, Expect=2e-61]} {Dmel: FBgn0033029, Not3, CCR4-NOT transcription complex subunit 3, [RH, Score=265, Expect=1e-76]} {Celegans: WBGene00003826, ntl-3, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_5044_0_1, dd_Smed_v6_5044_0_1, [RH, Score=228, Expect=9e-65]} {RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173} {RNA1310_4741.1, RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173} {RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173, RNA815_11164}

Cumulative graph for MligTC455_46972

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.98 2.584 1.00000 1.00000
RegionR2 0.762 2.584 0.44291 0.83199
RegionR3 0.369 2.584 0.61376 1.00000
RegionR4 1.98 2.584 0.06270 0.22480
RegionR5 2.279 2.584 0.01001 0.05777
RegionR6 0.042 2.584 0.72762 1.00000
RegionR7 -4.2 2.584 1.00000 1.00000
RegionR8 2.748 2.584 0.06486 0.49329

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.828 2.584 0.99996 1.00000
RegenerationR2 -0.192 2.584 0.75147 0.97385
RegenerationR3 1.239 2.584 0.12142 0.54038
RegenerationR4 0.839 2.584 0.22156 0.67003
RegenerationR5 0.073 2.584 0.92986 1.00000
RegenerationR6 2.491 2.584 0.00224 0.05376
RegenerationBL 3.082 2.584 0.00332 0.05005
RegenerationTP 2.854 2.584 0.05893 0.39328


Genes with expression patterns similar to MligTC455_46972

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46972 188 3.91 Mlig455_053488

Neo: -

Age: -

 CNOT3 4 - - 1.000 1.000 1.000 1.000 Mlig455_053488 {REF} {Length: 2868} {Pfam: Not1 N-terminal domain, CCR4-Not complex component [PF04065.17, score=261.8]; NOT2 / NOT3 / NOT5 family [PF04153.20, score=119.6]} {Human: ENSG00000088038, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=262, Expect=2e-76]; ENSG00000275979, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277615, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274176, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000273943, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277114, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274616, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000276082, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277600, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274941, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]} {Mouse: ENSMUSG00000035632, Cnot3, CCR4-NOT transcription complex, subunit 3, [RH, Score=211, Expect=2e-61]} {Dmel: FBgn0033029, Not3, CCR4-NOT transcription complex subunit 3, [RH, Score=265, Expect=1e-76]} {Celegans: WBGene00003826, ntl-3, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_5044_0_1, dd_Smed_v6_5044_0_1, [RH, Score=228, Expect=9e-65]} {RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173} {RNA1310_4741.1, RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173} {RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173, RNA815_11164}
2. MligTC455_22793 377 7.85 Mlig455_017926

Neo: -

Age: -

 PPP1R10 0.981 - - - - 0.981 - Mlig455_017926 {REF} {Length: 5605} {tRNA: Val(CAC),pseudo, score=34.5} {Pfam: Sleepless protein [PF17064.7, score=25.2]; TFIIS helical bundle-like domain [PF08711.13, score=20.6]} {Human: ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.2, Expect=4e-20]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.2, Expect=4e-20]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.2, Expect=4e-20]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.2, Expect=4e-20]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.2, Expect=4e-20]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.2, Expect=4e-20]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.2, Expect=4e-20]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [RH, Score=94.7, Expect=3e-19]} {Dmel: FBgn0053526, PNUTS, [RH, Score=85.5, Expect=2e-16]} {Smed: dd_Smed_v6_3412_0_1, dd_Smed_v6_3412_0_1, [RH, Score=166, Expect=1e-47]} {RNA1509_33397, RNA1509_3759} {RNA1310_6625, RNA1509_33397} {RNA1509_33397, RNA815_10397}
3. MligTC455_50553 1334 27.8 Mlig455_049371, Mlig455_062294

Neo: Irradiation

Age: -

Region-enriched R4: 1.497/0.00111

 0.966 - - - 0.966 - -

Mlig455_049371 {REF} {Length: 2106} {TRANSSPLICED} {Pfam: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain [PF09995.11, score=24.8]} {RNA1509_24816, RNA1509_40079} {RNA1310_8057, RNA1509_24816, RNA1509_40079} {RNA1509_24816, RNA1509_40079, RNA815_19398}

Mlig455_062294 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain [PF09995.11, score=27.4]} {RNA1509_24816} {RNA1310_8057} {RNA815_19398}
4. MligTC455_48223 1445 30.11 Mlig455_031634

Neo: Neoblast, stringent

Age: -

 NCBP2 0.96 - - - 0.960 - - Mlig455_031634 {REF} {Length: 2637} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=62.1]} {Human: ENSG00000114503, NCBP2, nuclear cap binding protein subunit 2, [RH, Score=241, Expect=8e-82]} {Mouse: ENSMUSG00000022774, Ncbp2, nuclear cap binding protein subunit 2, [RH, Score=241, Expect=4e-82]} {Dmel: FBgn0022943, Cbp20, cap binding protein 20, [RH, Score=244, Expect=1e-83]} {Celegans: WBGene00009141, ncbp-2, Nuclear cap-binding protein subunit 2, [RH, Score=210, Expect=5e-70]} {Smed: dd_Smed_v6_4139_0_1, dd_Smed_v6_4139_0_1, [RH, Score=231, Expect=3e-78]} {RNA1509_16228, RNA1509_24012, RNA1509_25225, RNA1509_42200} {RNA1310_30861.1, RNA1509_16228, RNA1509_24012, RNA1509_25225, RNA1509_42200} {RNA1509_16228, RNA1509_24012, RNA1509_25225, RNA1509_42200, RNA815_14824.1}
5. MligTC455_53613 665 13.86 Mlig455_016702

Neo: Irradiation

Age: -

 RCOR3 0.952 - - - - 0.952 - Mlig455_016702 {REF} {Length: 2704} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=57.4]; Myb-like DNA-binding domain [PF13921.8, score=28.5]; Myb DNA-binding like [PF15963.7, score=27.7]} {Human: ENSG00000117625, RCOR3, REST corepressor 3, [RH, Score=256, Expect=2e-78]; ENSG00000089902, RCOR1, REST corepressor 1, [RH, Score=250, Expect=6e-77]} {Mouse: ENSMUSG00000037395, Rcor3, REST corepressor 3, [RH, Score=256, Expect=4e-80]; ENSMUSG00000111452, Rcor3, REST corepressor 3, [RH, Score=256, Expect=4e-80]; ENSMUSG00000037896, Rcor1, REST corepressor 1, [RH, Score=249, Expect=4e-78]} {Dmel: FBgn0261573, CoRest, [RH, Score=199, Expect=3e-57]} {RNA1509_18788} {RNA1310_4503.1} {RNA815_5770}
6. MligTC455_53517 231 4.82 Mlig455_045499

Neo: -

Age: -

 0.95 - - - 0.950 - - Mlig455_045499 {REF} {Length: 1485} {RNA1509_40794} {RNA1310_6041.1} {RNA815_19941}

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