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Results for MligTC455_53556

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53556 300 6.24 Mlig455_053934, Mlig455_055336

Neo: -

Age: -

Mlig455_053934 {REF} {Length: 1144} {RNA1509_41793} {RNA1310_39874} {RNA815_29767}

Mlig455_055336 {REF} {Length: 683} {NoTransDecoderORF} {RNA1509_25533, RNA1509_31792, RNA1509_60083} {RNA1310_32275, RNA1509_25533, RNA1509_31792} {RNA1509_25533, RNA1509_31792, RNA815_27477.2}

Cumulative graph for MligTC455_53556

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.439 2.953 0.10947 0.68918
RegionR2 1.642 2.953 0.09929 0.38720
RegionR3 -0.41 2.953 0.94643 1.00000
RegionR4 1.716 2.953 0.14922 0.39859
RegionR5 0.561 2.953 0.58309 0.94141
RegionR6 1.182 2.953 0.22028 0.79985
RegionR7 0.378 2.953 0.70469 1.00000
RegionR8 1.37 2.953 0.23647 0.85227

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.055 2.953 1.00000 1.00000
RegenerationR2 -0.093 2.953 0.88167 1.00000
RegenerationR3 0.161 2.953 0.84495 0.99623
RegenerationR4 -0.647 2.953 0.46179 0.84814
RegenerationR5 0.616 2.953 0.43026 0.81831
RegenerationR6 0.119 2.953 0.88300 1.00000
RegenerationBL 0.393 2.953 0.63133 0.97224
RegenerationTP -1.377 2.953 0.17236 0.60501


Genes with expression patterns similar to MligTC455_53556

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53556 300 6.24 Mlig455_053934, Mlig455_055336

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_053934 {REF} {Length: 1144} {RNA1509_41793} {RNA1310_39874} {RNA815_29767}

Mlig455_055336 {REF} {Length: 683} {NoTransDecoderORF} {RNA1509_25533, RNA1509_31792, RNA1509_60083} {RNA1310_32275, RNA1509_25533, RNA1509_31792} {RNA1509_25533, RNA1509_31792, RNA815_27477.2}
2. MligTC455_17678 121 2.53 Mlig455_036741

Neo: -

Age: -

Region-enriched R2: 3.030/0.00234

Regeneration-downregulated R4: -3.160

Regeneration-depleted R4: -3.160

 TNNC2 2.564 - - 0.828 0.785 - 0.951 Mlig455_036741 {REF} {Length: 924} {Pfam: EF-hand domain pair [PF13499.8, score=100.6]; EF-hand domain [PF13405.8, score=75.3]; EF hand [PF00036.34, score=73.4]; EF-hand domain pair [PF13833.8, score=55.4]; EF hand [PF13202.8, score=44.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=23.7]; EF-hand domain [PF14658.8, score=20.3]} {Human: ENSG00000101470, TNNC2, troponin C2, fast skeletal type, [Score=74.7, Expect=4e-17]} {Mouse: ENSMUSG00000017300, Tnnc2, troponin C2, fast, [Score=74.7, Expect=3e-17]} {Dmel: FBgn0040351, CG11638, [Score=68.6, Expect=5e-14]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=72.0, Expect=3e-16]} {Smed: dd_Smed_v6_4669_0_1, dd_Smed_v6_4669_0_1, [Score=68.2, Expect=4e-15]} {RNA1310_42119} {RNA815_21011}
3. MligTC455_41580 574 11.95 Mlig455_001194

Neo: -

Age: -

 RBPMS 2.562 0.758 - 0.840 0.964 - - Mlig455_001194 {REF} {Length: 2007} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=63.4]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.1]} {Human: ENSG00000157110, RBPMS, RNA binding protein, mRNA processing factor, [RH, Score=135, Expect=2e-38]; ENSG00000166831, RBPMS2, RNA binding protein, mRNA processing factor 2, [RH, Score=134, Expect=1e-37]} {Mouse: ENSMUSG00000032387, Rbpms2, RNA binding protein with multiple splicing 2, [RH, Score=138, Expect=2e-39]; ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=133, Expect=1e-37]} {Dmel: FBgn0263995, cpo, couch potato, [RH, Score=203, Expect=1e-59]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [RH, Score=144, Expect=5e-41]} {Smed: dd_Smed_v6_4296_0_3, dd_Smed_v6_4296_0_3, [RH, Score=161, Expect=2e-47]} {RNA1509_12950} {RNA1310_3819.2} {RNA815_19117.1}
4. MligTC455_41581 438 9.13 Mlig455_001354

Neo: -

Age: -

 RBPMS 2.438 0.769 - 0.719 0.950 - - Mlig455_001354 {REF} {Length: 2343} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=63.4]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.1]} {Human: ENSG00000157110, RBPMS, RNA binding protein, mRNA processing factor, [RH, Score=135, Expect=2e-38]; ENSG00000166831, RBPMS2, RNA binding protein, mRNA processing factor 2, [RH, Score=134, Expect=1e-37]} {Mouse: ENSMUSG00000032387, Rbpms2, RNA binding protein with multiple splicing 2, [RH, Score=138, Expect=2e-39]; ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=133, Expect=1e-37]} {Dmel: FBgn0263995, cpo, couch potato, [RH, Score=203, Expect=1e-59]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [RH, Score=144, Expect=5e-41]} {Smed: dd_Smed_v6_4296_0_3, dd_Smed_v6_4296_0_3, [RH, Score=161, Expect=2e-47]} {RNA1509_12950} {RNA1310_3819.2} {RNA815_19117.1}
5. MligTC455_37200 32 0.67 Mlig455_030215, Mlig455_030221, Mlig455_067995, Mlig455_067998

Neo: -

Age: -

 1.829 - - 0.870 - - 0.959

Mlig455_030215 {REF} {Length: 1088} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=23.5]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=106, Expect=1e-25]} {RNA1310_102374}

Mlig455_030221 {REF} {Length: 1980} {RNA1310_56149} {RNA815_31265}

Mlig455_067995 {REF} {Length: 792} {Pfam: SAP domain [PF02037.29, score=35.7]} {RNA1509_8096} {RNA1310_1771} {RNA815_801}

Mlig455_067998 {REF} {Length: 1295} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=24.0]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=105, Expect=2e-25]} {RNA1310_102374}
6. MligTC455_15780 771 16.06 Mlig455_019809

Neo: -

Age: -

Region-enriched R7: 1.973/0.04443
Region-enriched R2: 1.891/0.04593

 1.806 - - - 0.989 - 0.817 Mlig455_019809 {REF} {Length: 883} {RNA1509_45384} {RNA1310_49242.1} {RNA815_27288}
7. MligTC455_28816 457 9.53 Mlig455_004161, Mlig455_021538, Mlig455_031963

Neo: -

Age: -

 UBR4 1.709 - 0.743 - 0.966 - -

Mlig455_004161 {REF} {Length: 2315} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1}

Mlig455_021538 {REF} {Length: 1587} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1}

Mlig455_031963 {REF} {Length: 2047} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1}
8. MligTC455_29212 747 15.57 Mlig455_054508, Mlig455_055425

Neo: -

Age: logFC(26M/2M)=-0.335

 TTN 0.974 - - - 0.974 - -

Mlig455_054508 {REF} {Length: 7764} {TRANSSPLICED} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=304.8]; Immunoglobulin domain [PF13927.8, score=223.4]; Immunoglobulin domain [PF13895.8, score=127.4]; Immunoglobulin domain [PF00047.27, score=123.7]; Immunoglobulin V-set domain [PF07686.19, score=46.1]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=31.0]; Penicillin-Binding Protein C-terminus Family [PF06832.14, score=25.2]; Spectrin repeat [PF00435.23, score=19.4]; Izumo-like Immunoglobulin domain [PF16706.7, score=18.7]} {Human: ENSG00000155657, TTN, titin, [Score=162, Expect=7e-39]; ENSG00000072195, SPEG, SPEG complex locus, [Score=161, Expect=6e-39]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=178, Expect=4e-44]} {Dmel: FBgn0053519, Unc-89, [Score=220, Expect=6e-57]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=187, Expect=3e-47]} {Smed: dd_Smed_v6_3381_0_2, dd_Smed_v6_3381_0_2, [RH, Score=238, Expect=4e-63]} {RNA1509_5183} {RNA1310_917.1} {RNA815_445}

Mlig455_055425 {REF} {Length: 8235} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=304.1]; Immunoglobulin domain [PF13927.8, score=224.2]; Immunoglobulin domain [PF00047.27, score=127.7]; Immunoglobulin domain [PF13895.8, score=127.3]; Immunoglobulin V-set domain [PF07686.19, score=46.6]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=31.3]; Penicillin-Binding Protein C-terminus Family [PF06832.14, score=26.0]; Spectrin repeat [PF00435.23, score=20.5]; Izumo-like Immunoglobulin domain [PF16706.7, score=18.8]} {Human: ENSG00000155657, TTN, titin, [Score=163, Expect=2e-39]; ENSG00000072195, SPEG, SPEG complex locus, [Score=161, Expect=6e-39]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=177, Expect=1e-43]} {Dmel: FBgn0053519, Unc-89, [Score=222, Expect=1e-57]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=187, Expect=3e-47]} {Smed: dd_Smed_v6_3381_0_2, dd_Smed_v6_3381_0_2, [RH, Score=241, Expect=8e-64]} {RNA1509_5183, RNA1509_54810} {RNA1310_917.1, RNA1509_5183, RNA1509_54810} {RNA1509_5183, RNA1509_54810, RNA815_445}
9. MligTC455_16201 175 3.64 Mlig455_041123, Mlig455_041179

Neo: -

Age: Down-Up-Up

 0.966 - - - - - 0.966

Mlig455_041123 {REF} {Length: 2988} {Pfam: Fas apoptotic inhibitory molecule (FAIM1) [PF06905.15, score=40.5]} {Smed: dd_Smed_v6_4798_0_1, dd_Smed_v6_4798_0_1, [RH, Score=74.7, Expect=7e-16]} {RNA1509_42904} {RNA1310_20004} {RNA815_27472.1}

Mlig455_041179 {REF} {Length: 2106} {Pfam: Fas apoptotic inhibitory molecule (FAIM1) [PF06905.15, score=40.5]} {Smed: dd_Smed_v6_4798_0_1, dd_Smed_v6_4798_0_1, [RH, Score=74.7, Expect=7e-16]} {RNA1509_54374} {RNA1310_48801} {RNA815_35149}
10. MligTC455_05581 42 0.87 Mlig455_005887

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_005887 {REF} {Length: 906} {NoTransDecoderORF}
11. MligTC455_31874 120 2.49 Mlig455_055021, Mlig455_060482, Mlig455_070239

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.120

 KCNIP4 0.959 - - - - - 0.959

Mlig455_055021 {REF} {Length: 3066} {RNA1509_28299} {RNA1310_2129.1} {RNA815_8926}

Mlig455_060482 {REF} {Length: 1527} {Pfam: EF-hand domain pair [PF13499.8, score=65.6]; EF hand [PF00036.34, score=50.9]; EF-hand domain [PF13405.8, score=49.0]; EF hand [PF13202.8, score=44.6]; EF-hand domain pair [PF13833.8, score=21.9]} {Human: ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=187, Expect=1e-56]} {Mouse: ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=187, Expect=8e-57]} {Dmel: FBgn0265595, CG44422, [RH, Score=172, Expect=5e-49]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=141, Expect=5e-40]} {Smed: dd_Smed_v6_9434_0_1, dd_Smed_v6_9434_0_1, [RH, Score=169, Expect=1e-50]} {RNA1509_6194} {RNA1310_6711.2} {RNA815_36885}

Mlig455_070239 {REF} {Length: 1317} {RNA1509_28299} {RNA1310_2129.2} {RNA815_27643}
12. MligTC455_43974 2882 60.03 Mlig455_006573, Mlig455_006684, Mlig455_006733

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.404

Region-enriched R7: 1.177/0.00570

Regeneration-enriched R2: 1.262
Regeneration-enriched BL: 1.070

 COL6A5 0.957 - - - 0.957 - -

Mlig455_006573 {REF} {Length: 2688} {TRANSSPLICED} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=100.4]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=143, Expect=3e-35]} {Mouse: ENSMUSG00000048126, Col6a3, collagen, type VI, alpha 3, [Score=111, Expect=4e-25]; ENSMUSG00000032572, Col6a4, collagen, type VI, alpha 4, [Score=107, Expect=1e-23]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=103, Expect=1e-22]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=100, Expect=6e-22]} {Smed: dd_Smed_v6_9565_0_1, dd_Smed_v6_9565_0_1, [Score=108, Expect=1e-24]} {RNA1509_12470} {RNA1310_7454.1} {RNA815_3530.1}

Mlig455_006684 {REF} {Length: 2681} {TRANSSPLICED} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=92.9]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=133, Expect=3e-32]} {Mouse: ENSMUSG00000026390, Marco, macrophage receptor with collagenous structure, [Score=104, Expect=2e-23]; ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=102, Expect=4e-22]; ENSMUSG00000032572, Col6a4, collagen, type VI, alpha 4, [Score=101, Expect=7e-22]; ENSMUSG00000091345, Col6a5, collagen, type VI, alpha 5, [Score=99.4, Expect=3e-21]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=90.5, Expect=1e-18]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=96.3, Expect=9e-21]} {Smed: dd_Smed_v6_9565_0_1, dd_Smed_v6_9565_0_1, [Score=103, Expect=5e-23]} {RNA1509_12470} {RNA1310_7454.1} {RNA815_3530.1}

Mlig455_006733 {REF} {Length: 4351} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=100.6]} {Human: ENSG00000172752, COL6A5, collagen type VI alpha 5 chain, [Score=143, Expect=3e-35]} {Mouse: ENSMUSG00000032572, Col6a4, collagen, type VI, alpha 4, [Score=105, Expect=4e-23]; ENSMUSG00000091345, Col6a5, collagen, type VI, alpha 5, [Score=102, Expect=4e-22]; ENSMUSG00000031502, Col4a1, collagen, type IV, alpha 1, [Score=101, Expect=8e-22]; ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=100, Expect=1e-21]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=101, Expect=5e-22]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=101, Expect=2e-22]} {Smed: dd_Smed_v6_9565_0_1, dd_Smed_v6_9565_0_1, [Score=109, Expect=5e-25]} {RNA1509_12470} {RNA1310_7454.1, RNA1509_12470} {RNA1509_12470, RNA815_3530.1}
13. MligTC455_12513 38 0.79 Mlig455_017740

Neo: Int S/G2/M

Age: -

 0.956 - - 0.956 - - - Mlig455_017740 {REF} {Length: 913} {RNA1310_37507} {RNA815_32171}
14. MligTC455_03720 238 4.97 Mlig455_049471

Neo: Irradiation

Age: logFC(26M/2M)=0.202

 LIMA1 0.955 - - - 0.955 - - Mlig455_049471 {REF} {Length: 5451} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=46.7]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=85.5, Expect=1e-16]; ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [RH, Score=84.7, Expect=9e-17]} {Smed: dd_Smed_v6_921_0_1, dd_Smed_v6_921_0_1, [RH, Score=97.8, Expect=1e-21]} {RNA1509_30907} {RNA1310_11285.1} {RNA815_11103}
15. MligTC455_43690 262 5.46 Mlig455_035029, Mlig455_053437

Neo: -

Age: -

Region-enriched R2: 6.108/0.00708

 WSCD2 0.954 - - 0.954 - - -

Mlig455_035029 {REF} {Length: 893} {Pfam: WSC domain [PF01822.21, score=50.2]; PAN domain [PF00024.28, score=29.7]} {RNA1310_42429} {RNA815_24291.1}

Mlig455_053437 {REF} {Length: 972} {Pfam: WSC domain [PF01822.21, score=52.4]; PAN domain [PF00024.28, score=29.7]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=44.7, Expect=1e-05]} {RNA1310_42429} {RNA815_24291.1}
16. MligTC455_33002 70 1.45 Mlig455_052601

Neo: -

Age: Up-Down-Down

Region-enriched R6: 2.874/0.00776

 HTR6 0.952 - - - - 0.952 - Mlig455_052601 {REF} {Length: 2364} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=93.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=36.5]} {Human: ENSG00000158748, HTR6, 5-hydroxytryptamine receptor 6, [Score=77.8, Expect=5e-15]; ENSG00000188778, ADRB3, adrenoceptor beta 3, [Score=74.7, Expect=5e-14]} {Mouse: ENSMUSG00000031489, Adrb3, adrenergic receptor, beta 3, [Score=82.4, Expect=8e-17]; ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=80.5, Expect=4e-16]} {Dmel: FBgn0038980, Octbeta1R, Octopamine beta1 receptor, [Score=77.4, Expect=3e-15]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=84.7, Expect=7e-18]} {Smed: dd_Smed_v6_40726_0_1, dd_Smed_v6_40726_0_1, [Score=74.3, Expect=2e-14]} {RNA1310_12200} {RNA815_34018}
17. MligTC455_24513 125 2.6 Mlig455_051236, Mlig455_055235

Neo: -

Age: -

 0.951 - - - - - 0.951

Mlig455_051236 {REF} {Length: 1426} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.1]} {RNA1509_32433} {RNA1310_27054.1} {RNA815_12624.1}

Mlig455_055235 {REF} {Length: 1542} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32433} {RNA1310_19716} {RNA815_13109}

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