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Results for MligTC455_03720

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_03720 238 4.97 Mlig455_049471

Neo: Irradiation

Age: logFC(26M/2M)=0.202

 LIMA1 Mlig455_049471 {REF} {Length: 5451} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=46.7]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=85.5, Expect=1e-16]; ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [RH, Score=84.7, Expect=9e-17]} {Smed: dd_Smed_v6_921_0_1, dd_Smed_v6_921_0_1, [RH, Score=97.8, Expect=1e-21]} {RNA1509_30907} {RNA1310_11285.1} {RNA815_11103}

Cumulative graph for MligTC455_03720

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.425 2.744 0.83991 1.00000
RegionR2 0.501 2.744 0.53990 0.90855
RegionR3 -0.614 2.744 0.40864 0.93468
RegionR4 -0.056 2.744 0.94465 1.00000
RegionR5 -0.087 2.744 0.89493 1.00000
RegionR6 -0.435 2.744 0.56542 1.00000
RegionR7 0.564 2.744 0.52815 1.00000
RegionR8 0.553 2.744 0.60599 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.847 2.744 0.42875 1.00000
RegenerationR2 1.277 2.744 0.03313 0.29957
RegenerationR3 1.563 2.744 0.04142 0.35688
RegenerationR4 0.295 2.744 0.68844 0.94842
RegenerationR5 0.92 2.744 0.16760 0.59412
RegenerationR6 1.269 2.744 0.10425 0.39989
RegenerationBL 1.568 2.744 0.03848 0.22247
RegenerationTP 0.194 2.744 0.83656 1.00000


Genes with expression patterns similar to MligTC455_03720

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_03720 238 4.97 Mlig455_049471

Neo: Irradiation

Age: logFC(26M/2M)=0.202

 LIMA1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_049471 {REF} {Length: 5451} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=46.7]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=85.5, Expect=1e-16]; ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [RH, Score=84.7, Expect=9e-17]} {Smed: dd_Smed_v6_921_0_1, dd_Smed_v6_921_0_1, [RH, Score=97.8, Expect=1e-21]} {RNA1509_30907} {RNA1310_11285.1} {RNA815_11103}
2. MligTC455_23441 513 10.7 Mlig455_021694

Neo: -

Age: Up-Down-Down

 MAPKBP1 1.745 - - - 0.775 0.970 - Mlig455_021694 {REF} {Length: 9716} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=97.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=50.5]} {Human: ENSG00000137802, MAPKBP1, mitogen-activated protein kinase binding protein 1, [RH, Score=509, Expect=4e-153]; ENSG00000075702, WDR62, WD repeat domain 62, [RH, Score=502, Expect=2e-150]} {Mouse: ENSMUSG00000033902, Mapkbp1, mitogen-activated protein kinase binding protein 1, [RH, Score=509, Expect=5e-153]; ENSMUSG00000037020, Wdr62, WD repeat domain 62, [RH, Score=501, Expect=3e-150]} {Dmel: FBgn0031374, Wdr62, WD repeat domain 62, [RH, Score=470, Expect=3e-136]} {Celegans: WBGene00019237, H24G06.1, [RH, Score=242, Expect=4e-64]} {Smed: dd_Smed_v6_7818_0_2, dd_Smed_v6_7818_0_2, [RH, Score=545, Expect=1e-165]} {RNA1509_11124, RNA1509_14492} {RNA1310_1098.1, RNA1509_14492} {RNA1509_14492, RNA815_15514}
3. MligTC455_39505 66 1.37 Mlig455_030969

Neo: -

Age: -

Region-enriched R2: 4.896/0.02013

 1.686 - - 0.728 0.958 - - Mlig455_030969 {REF} {Length: 482} {NoTransDecoderORF} {RNA1509_9917} {RNA1310_4320.1} {RNA815_4192.2}
4. MligTC455_41580 574 11.95 Mlig455_001194

Neo: -

Age: -

 RBPMS 1.684 0.722 - - 0.962 - - Mlig455_001194 {REF} {Length: 2007} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=63.4]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.1]} {Human: ENSG00000157110, RBPMS, RNA binding protein, mRNA processing factor, [RH, Score=135, Expect=2e-38]; ENSG00000166831, RBPMS2, RNA binding protein, mRNA processing factor 2, [RH, Score=134, Expect=1e-37]} {Mouse: ENSMUSG00000032387, Rbpms2, RNA binding protein with multiple splicing 2, [RH, Score=138, Expect=2e-39]; ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=133, Expect=1e-37]} {Dmel: FBgn0263995, cpo, couch potato, [RH, Score=203, Expect=1e-59]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [RH, Score=144, Expect=5e-41]} {Smed: dd_Smed_v6_4296_0_3, dd_Smed_v6_4296_0_3, [RH, Score=161, Expect=2e-47]} {RNA1509_12950} {RNA1310_3819.2} {RNA815_19117.1}
5. MligTC455_43015 439 9.15 Mlig455_014932, Mlig455_045193

Neo: -

Age: -

Region-enriched R2: 2.397/0.00888

 FBXW11, FBXW7 1.663 - - 0.712 - - 0.951

Mlig455_014932 {REF} {Length: 3850} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=81.7]; F-box-like [PF12937.9, score=41.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.2]; F-box domain [PF00646.35, score=24.3]} {Human: ENSG00000109670, FBXW7, F-box and WD repeat domain containing 7, [Score=129, Expect=3e-30]; ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [Score=128, Expect=3e-30]} {Mouse: ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [Score=130, Expect=2e-30]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [Score=127, Expect=3e-30]} {Dmel: FBgn0041171, ago, archipelago, [Score=125, Expect=7e-29]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [Score=124, Expect=6e-29]} {Smed: dd_Smed_v6_14791_0_2, dd_Smed_v6_14791_0_2, [RH, Score=256, Expect=2e-72]} {RNA1509_22589} {RNA1310_4416} {RNA815_10874}

Mlig455_045193 {REF} {Length: 3913} {Pfam: WD domain, G-beta repeat [PF00400.34, score=81.1]; F-box-like [PF12937.9, score=40.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]; F-box domain [PF00646.35, score=24.5]} {Human: ENSG00000072803, FBXW11, F-box and WD repeat domain containing 11, [Score=129, Expect=2e-30]; ENSG00000109670, FBXW7, F-box and WD repeat domain containing 7, [Score=128, Expect=9e-30]} {Mouse: ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [Score=129, Expect=4e-30]; ENSMUSG00000020271, Fbxw11, F-box and WD-40 domain protein 11, [Score=128, Expect=2e-30]} {Dmel: FBgn0041171, ago, archipelago, [Score=125, Expect=9e-29]} {Celegans: WBGene00003009, lin-23, F-box/WD repeat-containing protein lin-23, [Score=124, Expect=4e-29]} {Smed: dd_Smed_v6_14791_0_2, dd_Smed_v6_14791_0_2, [RH, Score=256, Expect=8e-73]} {RNA1509_22589, RNA1509_51967} {RNA1310_4416, RNA1509_22589, RNA1509_51967} {RNA1509_22589, RNA1509_51967, RNA815_10874}
6. MligTC455_38113 246 5.13 Mlig455_038735, Mlig455_041310, Mlig455_068428

Neo: -

Age: Up-Down-Up

 0.975 - - - - 0.975 -

Mlig455_038735 {REF} {Length: 11183} {RNA1509_26128, RNA1509_47004} {RNA1310_7005.1, RNA1509_26128, RNA1509_47004} {RNA1509_26128, RNA1509_47004, RNA815_23435}

Mlig455_041310 {REF} {Length: 2248} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_19542.3, RNA1509_58500} {RNA1509_58500, RNA815_58957}

Mlig455_068428 {REF} {Length: 1021} {NoTransDecoderORF} {RNA1509_12775} {RNA1310_27018} {RNA815_50345}
7. MligTC455_47105 59 1.24 Mlig455_037822

Neo: -

Age: Down-Up-Down

 LRCH3 0.96 - - - - 0.960 - Mlig455_037822 {REF} {Length: 2308} {Pfam: Calponin homology (CH) domain [PF00307.33, score=35.3]; Leucine rich repeat [PF13855.8, score=24.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=24.2]} {Human: ENSG00000186001, LRCH3, leucine rich repeats and calponin homology domain containing 3, [RH, Score=93.6, Expect=9e-20]} {Mouse: ENSMUSG00000022801, Lrch3, leucine-rich repeats and calponin homology (CH) domain containing 3, [RH, Score=92.4, Expect=1e-19]} {Dmel: FBgn0032633, Lrch, Leucine-rich-repeats and calponin homology domain protein, [Score=89.7, Expect=8e-19]} {Celegans: WBGene00015779, lrch-1, Leucine-rich Repeats (LRR) and Calponin Homology (CH) domain homolog, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_12270_0_1, dd_Smed_v6_12270_0_1, [Score=93.6, Expect=3e-20]} {RNA1509_10681} {RNA1310_4311} {RNA815_2362}
8. MligTC455_53556 300 6.24 Mlig455_053934, Mlig455_055336

Neo: -

Age: -

 0.955 - - - 0.955 - -

Mlig455_053934 {REF} {Length: 1144} {RNA1509_41793} {RNA1310_39874} {RNA815_29767}

Mlig455_055336 {REF} {Length: 683} {NoTransDecoderORF} {RNA1509_25533, RNA1509_31792, RNA1509_60083} {RNA1310_32275, RNA1509_25533, RNA1509_31792} {RNA1509_25533, RNA1509_31792, RNA815_27477.2}
9. MligTC455_22654 118 2.46 Mlig455_059489

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.357

Region-enriched R7: 3.584/0.00039

 WSCD2 0.95 - 0.950 - - - - Mlig455_059489 {REF} {Length: 689} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=72.8]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.9, Expect=3e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=1e-10]} {RNA1509_47659} {RNA1310_44091} {RNA815_2520.1}

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