TomoSeq data search

Data search

Results for MligTC455_53618

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53618

266

5.54

Mlig455_015917

Neo: -

Age: Up-Down-Down

ARHGAP5

Mlig455_015917 {REF} {Length: 9721} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=86.8]; Ras family [PF00071.24, score=25.0]; p190-A and -B Rho GAPs FF domain [PF16512.7, score=23.5]} {Human: ENSG00000100852, ARHGAP5, Rho GTPase activating protein 5, [Score=225, Expect=5e-59]; ENSG00000160007, ARHGAP35, Rho GTPase activating protein 35, [Score=222, Expect=5e-58]} {Mouse: ENSMUSG00000035133, Arhgap5, Rho GTPase activating protein 5, [Score=227, Expect=1e-59]; ENSMUSG00000058230, Arhgap35, Rho GTPase activating protein 35, [Score=222, Expect=5e-58]} {Dmel: FBgn0026375, RhoGAPp190, Rho GTPase activating protein p190, [RH, Score=233, Expect=2e-61]} {Celegans: WBGene00010374, rga-5, Rho GTPase Activating protein, [RH, Score=150, Expect=2e-36]} {Smed: dd_Smed_v6_10977_0_1, dd_Smed_v6_10977_0_1, [RH, Score=128, Expect=1e-29]} {RNA1509_14524} {RNA1310_540.1} {RNA815_13752}

Cumulative graph for MligTC455_53618

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.96	2.923	0.62215	1.00000
RegionR2	0.527	2.923	0.43623	0.82590
RegionR3	-0.345	2.923	0.57322	1.00000
RegionR4	0.18	2.923	0.78800	1.00000
RegionR5	0.398	2.923	0.43568	0.79584
RegionR6	0.676	2.923	0.22601	0.80772
RegionR7	-0.008	2.923	0.99471	1.00000
RegionR8	-0.468	2.923	0.65874	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.834	2.923	0.42770	1.00000
RegenerationR2	0.02	2.923	0.96771	1.00000
RegenerationR3	0.69	2.923	0.24654	0.68045
RegenerationR4	0.112	2.923	0.85250	1.00000
RegenerationR5	0.784	2.923	0.11749	0.51536
RegenerationR6	-0.243	2.923	0.67691	0.91252
RegenerationBL	1.006	2.923	0.13623	0.43982
RegenerationTP	0.492	2.923	0.56301	0.93996

Genes with expression patterns similar to MligTC455_53618

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53618	266	5.54	Mlig455_015917	Neo: - Age: Up-Down-Down	ARHGAP5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015917 {REF} {Length: 9721} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=86.8]; Ras family [PF00071.24, score=25.0]; p190-A and -B Rho GAPs FF domain [PF16512.7, score=23.5]} {Human: ENSG00000100852, ARHGAP5, Rho GTPase activating protein 5, [Score=225, Expect=5e-59]; ENSG00000160007, ARHGAP35, Rho GTPase activating protein 35, [Score=222, Expect=5e-58]} {Mouse: ENSMUSG00000035133, Arhgap5, Rho GTPase activating protein 5, [Score=227, Expect=1e-59]; ENSMUSG00000058230, Arhgap35, Rho GTPase activating protein 35, [Score=222, Expect=5e-58]} {Dmel: FBgn0026375, RhoGAPp190, Rho GTPase activating protein p190, [RH, Score=233, Expect=2e-61]} {Celegans: WBGene00010374, rga-5, Rho GTPase Activating protein, [RH, Score=150, Expect=2e-36]} {Smed: dd_Smed_v6_10977_0_1, dd_Smed_v6_10977_0_1, [RH, Score=128, Expect=1e-29]} {RNA1509_14524} {RNA1310_540.1} {RNA815_13752}
2.	MligTC455_25657	669	13.94	Mlig455_028832	Neo: - Age: Up-Down-Down	DMD	1.825	-	-	-	0.955	-	0.870	Mlig455_028832 {REF} {Length: 7128} {Pfam: EF-hand [PF09069.13, score=126.5]; EF hand [PF09068.13, score=47.0]; Zinc finger, ZZ type [PF00569.19, score=43.4]; WW domain [PF00397.28, score=20.7]} {Human: ENSG00000198947, DMD, dystrophin, [Score=368, Expect=2e-105]} {Mouse: ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [Score=363, Expect=3e-102]} {Dmel: FBgn0260003, Dys, Dystrophin, [Score=377, Expect=3e-111]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [Score=273, Expect=6e-74]} {Smed: dd_Smed_v6_5325_0_3, dd_Smed_v6_5325_0_3, [RH, Score=291, Expect=9e-80]} {RNA1509_42220} {RNA1310_3955} {RNA815_1505.1}
3.	MligTC455_35946	324	6.74	Mlig455_024783	Neo: - Age: -	ADAM33	1.666	0.715	-	-	-	-	0.951	Mlig455_024783 {REF} {Length: 7480} {TRANSSPLICED} {Pfam: Disintegrin [PF00200.25, score=57.2]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=52.8]; ADAM cysteine-rich [PF08516.14, score=32.3]; Reprolysin family propeptide [PF01562.21, score=28.7]; EGF-like domain [PF07974.15, score=21.8]} {Human: ENSG00000149451, ADAM33, ADAM metallopeptidase domain 33, [Score=157, Expect=2e-38]; ENSG00000135074, ADAM19, ADAM metallopeptidase domain 19, [Score=153, Expect=4e-37]} {Mouse: ENSMUSG00000014725, Adam28, a disintegrin and metallopeptidase domain 28, [Score=164, Expect=5e-41]; ENSMUSG00000027318, Adam33, a disintegrin and metallopeptidase domain 33, [Score=160, Expect=1e-39]} {Dmel: FBgn0259110, mmd, mind-meld, [Score=179, Expect=2e-45]} {Celegans: WBGene00006804, unc-71, ADM-1 preproprotein, [Score=136, Expect=4e-32]} {Smed: dd_Smed_v6_8718_0_1, dd_Smed_v6_8718_0_1, [RH, Score=275, Expect=2e-75]} {RNA1509_10745} {RNA1310_2002.1} {RNA815_5766}
4.	MligTC455_30275	491	10.22	Mlig455_030075, Mlig455_036671	Neo: - Age: - Regeneration-upregulated BL: 3.836 Regeneration-enriched BL: 3.836		0.96	-	-	-	0.960	-	-	Mlig455_030075 {REF} {Length: 336} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=18.6]} {Celegans: WBGene00022511, ZC53.4, [Score=84.3, Expect=3e-20]} {Smed: dd_Smed_v6_23154_0_1, dd_Smed_v6_23154_0_1, [Score=120, Expect=2e-34]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_036671 {REF} {Length: 810} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=34.0]} {Celegans: WBGene00022511, ZC53.4, [Score=151, Expect=3e-41]} {Smed: dd_Smed_v6_23154_0_1, dd_Smed_v6_23154_0_1, [Score=174, Expect=5e-53]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1}
5.	MligTC455_24837	414	8.62	Mlig455_013488	Neo: - Age: -	DGKZ	0.957	-	-	-	-	-	0.957	Mlig455_013488 {REF} {Length: 7616} {Pfam: Diacylglycerol kinase accessory domain [PF00609.21, score=144.5]; Diacylglycerol kinase catalytic domain [PF00781.26, score=97.6]; Ankyrin repeats (3 copies) [PF12796.9, score=48.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=42.0]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeats (many copies) [PF13857.8, score=39.6]; Ankyrin repeat [PF00023.32, score=36.0]; Ankyrin repeat [PF13606.8, score=23.5]} {Human: ENSG00000149091, DGKZ, diacylglycerol kinase zeta, [RH, Score=692, Expect=0.0]; ENSG00000157680, DGKI, diacylglycerol kinase iota, [RH, Score=668, Expect=0.0]} {Mouse: ENSMUSG00000040479, Dgkz, diacylglycerol kinase zeta, [Score=693, Expect=0.0]; ENSMUSG00000038665, Dgki, diacylglycerol kinase, iota, [Score=677, Expect=0.0]} {Dmel: FBgn0261549, rdgA, retinal degeneration A, [Score=550, Expect=3e-174]} {Celegans: WBGene00019428, dgk-5, Putative diacylglycerol kinase K06A1.6, [Score=405, Expect=1e-121]} {Smed: dd_Smed_v6_12579_0_4, dd_Smed_v6_12579_0_4, [Score=791, Expect=0.0]} {RNA1509_12565} {RNA1310_3047.1} {RNA815_7792.1}
6.	MligTC455_47300	548	11.41	Mlig455_049106	Neo: - Age: - Region-enriched R4: 2.078/0.03980	ASXL2	0.952	-	-	-	0.952	-	-	Mlig455_049106 {REF} {Length: 3730} {TRANSSPLICED} {Pfam: Asx homology domain [PF13919.8, score=57.7]} {Human: ENSG00000143970, ASXL2, ASXL transcriptional regulator 2, [RH, Score=82.8, Expect=1e-15]} {Mouse: ENSMUSG00000037486, Asxl2, additional sex combs like 2, transcriptional regulator, [RH, Score=78.6, Expect=6e-15]} {Smed: dd_Smed_v6_8139_0_1, dd_Smed_v6_8139_0_1, [Score=52.4, Expect=1e-06]} {RNA1509_12997} {RNA1310_6363} {RNA815_24627.1}
7.	MligTC455_39102	413	8.6	Mlig455_061920	Neo: - Age: - Regeneration-downregulated BL: -3.081 Regeneration-depleted BL: -3.081		0.95	-	-	0.950	-	-	-	Mlig455_061920 {REF} {Length: 2570} {Pfam: EF hand [PF00036.34, score=39.3]; EF-hand domain [PF13405.8, score=29.5]; EF-hand domain pair [PF13499.8, score=24.5]; EF hand [PF13202.8, score=24.3]; EF-hand domain pair [PF13833.8, score=23.4]} {Celegans: WBGene00000287, cal-3, CALmodulin related genes, [Score=48.1, Expect=1e-06]} {Smed: dd_Smed_v6_13677_0_1, dd_Smed_v6_13677_0_1, [Score=151, Expect=7e-45]} {RNA1509_25282} {RNA1310_29885.1} {RNA815_14774.1}

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