TomoSeq data search

Data search

Results for MligTC455_24837

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24837

414

8.62

Mlig455_013488

Neo: -

Age: -

DGKZ

Mlig455_013488 {REF} {Length: 7616} {Pfam: Diacylglycerol kinase accessory domain [PF00609.21, score=144.5]; Diacylglycerol kinase catalytic domain [PF00781.26, score=97.6]; Ankyrin repeats (3 copies) [PF12796.9, score=48.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=42.0]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeats (many copies) [PF13857.8, score=39.6]; Ankyrin repeat [PF00023.32, score=36.0]; Ankyrin repeat [PF13606.8, score=23.5]} {Human: ENSG00000149091, DGKZ, diacylglycerol kinase zeta, [RH, Score=692, Expect=0.0]; ENSG00000157680, DGKI, diacylglycerol kinase iota, [RH, Score=668, Expect=0.0]} {Mouse: ENSMUSG00000040479, Dgkz, diacylglycerol kinase zeta, [Score=693, Expect=0.0]; ENSMUSG00000038665, Dgki, diacylglycerol kinase, iota, [Score=677, Expect=0.0]} {Dmel: FBgn0261549, rdgA, retinal degeneration A, [Score=550, Expect=3e-174]} {Celegans: WBGene00019428, dgk-5, Putative diacylglycerol kinase K06A1.6, [Score=405, Expect=1e-121]} {Smed: dd_Smed_v6_12579_0_4, dd_Smed_v6_12579_0_4, [Score=791, Expect=0.0]} {RNA1509_12565} {RNA1310_3047.1} {RNA815_7792.1}

Cumulative graph for MligTC455_24837

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.7	3.48	0.62282	1.00000
RegionR2	0.537	3.48	0.25490	0.63512
RegionR3	-0.355	3.48	0.40636	0.93286
RegionR4	-0.009	3.48	0.98880	1.00000
RegionR5	0.366	3.48	0.31047	0.64916
RegionR6	0.694	3.48	0.07101	0.49625
RegionR7	-0.782	3.48	0.22598	0.84657
RegionR8	0.249	3.48	0.70880	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.067	3.48	0.97501	1.00000
RegenerationR2	-0.817	3.48	0.01547	0.20417
RegenerationR3	-0.066	3.48	0.87524	1.00000
RegenerationR4	-0.659	3.48	0.14653	0.57273
RegenerationR5	0.3	3.48	0.39084	0.79310
RegenerationR6	-0.801	3.48	0.05069	0.28171
RegenerationBL	-1.707	3.48	0.01908	0.14894
RegenerationTP	-0.425	3.48	0.52173	0.91509

Genes with expression patterns similar to MligTC455_24837

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24837	414	8.62	Mlig455_013488	Neo: - Age: -	DGKZ	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013488 {REF} {Length: 7616} {Pfam: Diacylglycerol kinase accessory domain [PF00609.21, score=144.5]; Diacylglycerol kinase catalytic domain [PF00781.26, score=97.6]; Ankyrin repeats (3 copies) [PF12796.9, score=48.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=42.0]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeats (many copies) [PF13857.8, score=39.6]; Ankyrin repeat [PF00023.32, score=36.0]; Ankyrin repeat [PF13606.8, score=23.5]} {Human: ENSG00000149091, DGKZ, diacylglycerol kinase zeta, [RH, Score=692, Expect=0.0]; ENSG00000157680, DGKI, diacylglycerol kinase iota, [RH, Score=668, Expect=0.0]} {Mouse: ENSMUSG00000040479, Dgkz, diacylglycerol kinase zeta, [Score=693, Expect=0.0]; ENSMUSG00000038665, Dgki, diacylglycerol kinase, iota, [Score=677, Expect=0.0]} {Dmel: FBgn0261549, rdgA, retinal degeneration A, [Score=550, Expect=3e-174]} {Celegans: WBGene00019428, dgk-5, Putative diacylglycerol kinase K06A1.6, [Score=405, Expect=1e-121]} {Smed: dd_Smed_v6_12579_0_4, dd_Smed_v6_12579_0_4, [Score=791, Expect=0.0]} {RNA1509_12565} {RNA1310_3047.1} {RNA815_7792.1}
2.	MligTC455_30078	422	8.8	Mlig455_035919	Neo: - Age: -	SEMA3E	1.879	-	-	0.922	0.957	-	-	Mlig455_035919 {REF} {Length: 4961} {TRANSSPLICED} {Pfam: Sema domain [PF01403.21, score=72.0]} {Human: ENSG00000170381, SEMA3E, semaphorin 3E, [Score=77.4, Expect=5e-14]; ENSG00000187764, SEMA4D, semaphorin 4D, [Score=75.1, Expect=3e-13]} {Mouse: ENSMUSG00000063531, Sema3e, sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E, [Score=75.9, Expect=1e-13]} {Celegans: WBGene00004890, smp-2, SeMaPhorin related, [Score=52.8, Expect=9e-07]} {Smed: dd_Smed_v6_12018_0_1, dd_Smed_v6_12018_0_1, [RH, Score=52.4, Expect=8e-07]} {RNA1310_11198} {RNA815_5413}
3.	MligTC455_50737	530	11.05	Mlig455_048544	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.397	MXI1	1.683	-	0.955	-	0.728	-	-	Mlig455_048544 {REF} {Length: 3190} {tRNA: Val(CAC),pseudo, score=21.1} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=38.9]} {Human: ENSG00000119950, MXI1, MAX interactor 1, dimerization protein, [Score=59.3, Expect=4e-10]} {Mouse: ENSMUSG00000025025, Mxi1, MAX interactor 1, dimerization protein, [Score=60.5, Expect=1e-10]; ENSMUSG00000001156, Mxd1, MAX dimerization protein 1, [Score=58.9, Expect=7e-10]} {Dmel: FBgn0023215, Mnt, [Score=50.4, Expect=1e-06]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=47.0, Expect=6e-06]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [RH, Score=69.3, Expect=1e-13]} {RNA1509_21599} {RNA1310_15507} {RNA815_27395}
4.	MligTC455_51117	160	3.33	Mlig455_061620	Neo: - Age: -	TPK1	0.963	-	-	-	-	-	0.963	Mlig455_061620 {REF} {Length: 1966} {TRANSSPLICED} {Pfam: Thiamin pyrophosphokinase, catalytic domain [PF04263.18, score=107.4]; Thiamin pyrophosphokinase, vitamin B1 binding domain [PF04265.16, score=53.0]} {Human: ENSG00000285075, TPK1, thiamin pyrophosphokinase 1, [RH, Score=127, Expect=4e-35]; ENSG00000196511, TPK1, thiamin pyrophosphokinase 1, [RH, Score=127, Expect=4e-35]} {Mouse: ENSMUSG00000029735, Tpk1, thiamine pyrophosphokinase, [RH, Score=125, Expect=1e-34]} {Dmel: FBgn0037942, CG14721, [RH, Score=95.9, Expect=2e-23]} {Celegans: WBGene00014027, tpk-1, Thiamin pyrophosphokinase 1, [RH, Score=90.5, Expect=1e-21]} {Smed: dd_Smed_v6_7913_0_2, dd_Smed_v6_7913_0_2, [RH, Score=115, Expect=2e-31]} {RNA1310_31001} {RNA815_16669}
5.	MligTC455_21218	254	5.29	Mlig455_039115	Neo: - Age: logFC(26M/2M)=0.413		0.961	-	-	-	0.961	-	-	Mlig455_039115 {REF} {Length: 3877} {RNA1509_42019} {RNA1310_12333.1, RNA1509_42019} {RNA1509_42019, RNA815_15134}
6.	MligTC455_52371	366	7.63	Mlig455_058035	Neo: - Age: -	ACBD3	0.957	-	-	-	-	-	0.957	Mlig455_058035 {REF} {Length: 2844} {TRANSSPLICED} {Pfam: Golgi-dynamics membrane-trafficking [PF13897.8, score=93.0]} {Human: ENSG00000182827, ACBD3, acyl-CoA binding domain containing 3, [Score=96.7, Expect=3e-22]} {Mouse: ENSMUSG00000026499, Acbd3, acyl-Coenzyme A binding domain containing 3, [Score=93.6, Expect=2e-21]} {Dmel: FBgn0031061, CG14232, [Score=98.6, Expect=3e-23]} {Celegans: WBGene00012765, Y41E3.7, [Score=122, Expect=5e-34]} {Smed: dd_Smed_v6_2498_0_1, dd_Smed_v6_2498_0_1, [Score=142, Expect=6e-41]} {RNA1509_14041} {RNA1310_22568} {RNA815_7615}
7.	MligTC455_53618	266	5.54	Mlig455_015917	Neo: - Age: Up-Down-Down	ARHGAP5	0.957	-	-	-	-	-	0.957	Mlig455_015917 {REF} {Length: 9721} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=86.8]; Ras family [PF00071.24, score=25.0]; p190-A and -B Rho GAPs FF domain [PF16512.7, score=23.5]} {Human: ENSG00000100852, ARHGAP5, Rho GTPase activating protein 5, [Score=225, Expect=5e-59]; ENSG00000160007, ARHGAP35, Rho GTPase activating protein 35, [Score=222, Expect=5e-58]} {Mouse: ENSMUSG00000035133, Arhgap5, Rho GTPase activating protein 5, [Score=227, Expect=1e-59]; ENSMUSG00000058230, Arhgap35, Rho GTPase activating protein 35, [Score=222, Expect=5e-58]} {Dmel: FBgn0026375, RhoGAPp190, Rho GTPase activating protein p190, [RH, Score=233, Expect=2e-61]} {Celegans: WBGene00010374, rga-5, Rho GTPase Activating protein, [RH, Score=150, Expect=2e-36]} {Smed: dd_Smed_v6_10977_0_1, dd_Smed_v6_10977_0_1, [RH, Score=128, Expect=1e-29]} {RNA1509_14524} {RNA1310_540.1} {RNA815_13752}
8.	MligTC455_44085	545	11.35	Mlig455_011538	Neo: Int S/G2/M Age: -		0.953	-	-	-	-	-	0.953	Mlig455_011538 {REF} {Length: 1455} {NoTransDecoderORF} {RNA1509_11130} {RNA1310_5404} {RNA815_1916}

Berezikov Lab - 2020-2021 © ERIBA