TomoSeq data search

Data search

Results for MligTC455_53663

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53663

2058

42.87

Mlig455_008115

Neo: -

Age: logFC(26M/2M)=-0.253

Mlig455_008115 {REF} {Length: 2006} {Smed: dd_Smed_v6_1161_1_1, dd_Smed_v6_1161_1_1, [RH, Score=69.7, Expect=2e-13]} {RNA1509_18168, RNA1509_23504, RNA1509_9630} {RNA1310_13288.1, RNA1509_18168, RNA1509_23504, RNA1509_9630} {RNA1509_18168, RNA1509_23504, RNA1509_9630, RNA815_8569}

Cumulative graph for MligTC455_53663

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.817	5.606	0.23985	0.88637
RegionR2	-0.123	5.606	0.74255	1.00000
RegionR3	-0.388	5.606	0.21106	0.75202
RegionR4	0.366	5.606	0.33169	0.64987
RegionR5	-0.719	5.606	0.01684	0.08537
RegionR6	-0.367	5.606	0.24198	0.82745
RegionR7	0.105	5.606	0.75675	1.00000
RegionR8	0.309	5.606	0.41004	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.302	5.606	0.00857	0.42103
RegenerationR2	-0.419	5.606	0.24593	0.69344
RegenerationR3	-0.518	5.606	0.19889	0.63349
RegenerationR4	-0.97	5.606	0.01865	0.21423
RegenerationR5	-0.705	5.606	0.07169	0.42042
RegenerationR6	-0.533	5.606	0.17845	0.51218
RegenerationBL	-1.123	5.606	0.01281	0.11630
RegenerationTP	-0.014	5.606	0.97294	1.00000

Genes with expression patterns similar to MligTC455_53663

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53663	2058	42.87	Mlig455_008115	Neo: - Age: logFC(26M/2M)=-0.253		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008115 {REF} {Length: 2006} {Smed: dd_Smed_v6_1161_1_1, dd_Smed_v6_1161_1_1, [RH, Score=69.7, Expect=2e-13]} {RNA1509_18168, RNA1509_23504, RNA1509_9630} {RNA1310_13288.1, RNA1509_18168, RNA1509_23504, RNA1509_9630} {RNA1509_18168, RNA1509_23504, RNA1509_9630, RNA815_8569}
2.	MligTC455_24940	3175	66.14	Mlig455_011276, Mlig455_011374	Neo: - Age: Down-Up-Up		2.516	0.738	-	0.960	0.818	-	-	Mlig455_011276 {REF} {Length: 3380} {Pfam: Reeler domain [PF02014.18, score=50.9]; Eukaryotic cytochrome b561 [PF03188.18, score=38.4]} {Celegans: WBGene00007339, C05D12.1, [Score=68.2, Expect=9e-12]} {Smed: dd_Smed_v6_13311_0_1, dd_Smed_v6_13311_0_1, [Score=155, Expect=4e-40]} {RNA1509_34604, RNA1509_36747, RNA1509_52003, RNA1509_58766} {RNA1310_16616, RNA1509_36747, RNA1509_52003, RNA1509_58766} {RNA1509_36747, RNA1509_52003, RNA1509_58766, RNA815_3087.1} Mlig455_011374 {REF} {Length: 4099} {Pfam: Reeler domain [PF02014.18, score=51.0]; Eukaryotic cytochrome b561 [PF03188.18, score=38.1]} {Celegans: WBGene00007339, C05D12.1, [Score=68.2, Expect=8e-12]} {Smed: dd_Smed_v6_13311_0_1, dd_Smed_v6_13311_0_1, [Score=153, Expect=2e-39]} {RNA1509_25592, RNA1509_34604, RNA1509_41623, RNA1509_55699} {RNA1310_16616, RNA1509_25592, RNA1509_34604, RNA1509_41623, RNA1509_55699} {RNA1509_25592, RNA1509_34604, RNA1509_41623, RNA1509_55699, RNA815_3087.1}
3.	MligTC455_21803	1070	22.29	Mlig455_051085	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.341		1.735	-	-	0.965	-	0.770	-	Mlig455_051085 {REF} {Length: 13899} {TRANSSPLICED} {Smed: dd_Smed_v6_4420_0_2, dd_Smed_v6_4420_0_2, [Score=53.1, Expect=3e-06]} {RNA1509_25269} {RNA1310_284.1} {RNA815_96}
4.	MligTC455_50431	370	7.7	Mlig455_012674	Neo: - Age: -	ANKRD33	1.726	-	-	-	0.958	0.768	-	Mlig455_012674 {REF} {Length: 2137} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=57.9]; Ankyrin repeats (many copies) [PF13637.8, score=56.3]; Ankyrin repeats (many copies) [PF13857.8, score=49.8]; Ankyrin repeat [PF00023.32, score=34.1]; Ankyrin repeat [PF13606.8, score=26.4]} {Human: ENSG00000167612, ANKRD33, ankyrin repeat domain 33, [RH, Score=58.5, Expect=2e-08]} {Mouse: ENSMUSG00000096265, 4930467E23Rik, RIKEN cDNA 4930467E23 gene, [Score=59.7, Expect=3e-09]; ENSMUSG00000074449, Gm15319, predicted gene 15319, [Score=59.3, Expect=4e-09]; ENSMUSG00000095294, Gm21119, predicted gene, 21119, [Score=59.3, Expect=4e-09]; ENSMUSG00000106824, Gm7697, predicted gene 7697, [Score=58.5, Expect=7e-09]; ENSMUSG00000107280, Gm9495, predicted gene 9495, [Score=58.5, Expect=7e-09]; ENSMUSG00000022237, Ankrd33b, ankyrin repeat domain 33B, [Score=57.0, Expect=3e-08]} {Dmel: FBgn0029137, Patsas, [Score=56.6, Expect=4e-08]} {Celegans: WBGene00006490, kdin-1, KiDINs220 (Vertebrate scaffold protein) homolog, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=57.8, Expect=2e-08]} {RNA1509_8000} {RNA1310_3084.1} {RNA815_6850}
5.	MligTC455_49552	1383	28.82	Mlig455_049932	Neo: - Age: -	MAP3K19	1.683	0.729	-	-	0.954	-	-	Mlig455_049932 {REF} {Length: 4789} {Pfam: Protein kinase domain [PF00069.27, score=149.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=131.1]; Caspase domain [PF00656.24, score=120.9]; Ankyrin repeats (3 copies) [PF12796.9, score=69.7]; Ankyrin repeats (many copies) [PF13857.8, score=55.5]; Ankyrin repeat [PF00023.32, score=42.8]; Ankyrin repeats (many copies) [PF13637.8, score=41.0]; Ankyrin repeat [PF13606.8, score=39.6]; Fungal protein kinase [PF17667.3, score=18.8]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=126, Expect=1e-29]; ENSG00000060237, WNK1, WNK lysine deficient protein kinase 1, [Score=120, Expect=8e-27]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=120, Expect=5e-28]; ENSMUSG00000045962, Wnk1, WNK lysine deficient protein kinase 1, [Score=120, Expect=5e-27]; ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=116, Expect=3e-26]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=109, Expect=5e-24]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=106, Expect=7e-23]} {Smed: dd_Smed_v6_2030_0_14, dd_Smed_v6_2030_0_14, [Score=104, Expect=2e-23]} {RNA1509_2733, RNA1509_55677} {RNA1310_1474, RNA1509_2733, RNA1509_55677} {RNA1509_2733, RNA1509_55677, RNA815_848}
6.	MligTC455_52569	656	13.66	Mlig455_037578, Mlig455_037634	Neo: - Age: logFC(26M/2M)=-0.414		1.675	0.716	-	0.959	-	-	-	Mlig455_037578 {REF} {Length: 1644} {RNA1509_53547} {RNA1310_24704, RNA1509_53547} {RNA1509_53547, RNA815_11793} Mlig455_037634 {REF} {Length: 1597} {RNA1509_53547} {RNA1310_24704} {RNA815_11793}
7.	MligTC455_40385	107	2.22	Mlig455_000019, Mlig455_016555, Mlig455_032870, Mlig455_045206	Neo: - Age: Down-Up-Up		0.983	-	-	-	0.983	-	-	Mlig455_000019 {REF} {Length: 671} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_016555 {REF} {Length: 692} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_032870 {REF} {Length: 762} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_045206 {REF} {Length: 643} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1}
8.	MligTC455_52006	422	8.79	Mlig455_001435	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.779		0.972	-	-	-	-	-	0.972	Mlig455_001435 {REF} {Length: 2591} {RNA1509_21480, RNA1509_26941, RNA1509_44473} {RNA1310_9042, RNA1509_21480, RNA1509_26941, RNA1509_44473} {RNA1509_21480, RNA1509_26941, RNA1509_44473, RNA815_15746}
9.	MligTC455_36207	705	14.68	Mlig455_050594	Neo: - Age: Down-Up-Up	LITAF	0.966	-	-	0.966	-	-	-	Mlig455_050594 {REF} {Length: 1183} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=85.5]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [Score=79.3, Expect=5e-19]; ENSG00000089486, CDIP1, cell death inducing p53 target 1, [Score=78.2, Expect=5e-19]; ENSG00000274336, CDIP1, cell death inducing p53 target 1, [Score=78.2, Expect=5e-19]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [Score=85.1, Expect=2e-21]} {Dmel: FBgn0052280, CG32280, [Score=70.5, Expect=2e-16]} {Celegans: WBGene00012549, Y37D8A.8, [Score=52.8, Expect=1e-09]} {Smed: dd_Smed_v6_353_0_1, dd_Smed_v6_353_0_1, [Score=87.8, Expect=2e-23]} {RNA1509_43875} {RNA1310_38083} {RNA815_19137.1}
10.	MligTC455_28112	396	8.24	Mlig455_039938, Mlig455_071121	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_039938 {REF} {Length: 232} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_54448} {RNA815_38909} Mlig455_071121 {REF} {Length: 713} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_76536} {RNA815_52485}

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