TomoSeq data search

Data search

Results for MligTC455_53726

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53726

206

4.30

Mlig455_025696

Neo: -

Age: Down-Down-Up

RBCK1

Mlig455_025696 {REF} {Length: 2805} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=36.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.6]; Ring finger domain [PF13639.8, score=20.1]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [Score=191, Expect=4e-57]} {Mouse: ENSMUSG00000027466, Rbck1, RanBP-type and C3HC4-type zinc finger containing 1, [Score=189, Expect=2e-56]} {Smed: dd_Smed_v6_1293_0_1, dd_Smed_v6_1293_0_1, [Score=244, Expect=1e-78]} {RNA1509_40724} {RNA1310_9208.1} {RNA815_11140}

Cumulative graph for MligTC455_53726

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.127	2.768	0.26279	0.91232
RegionR2	-0.024	2.768	0.86235	1.00000
RegionR3	-0.634	2.768	0.96956	1.00000
RegionR4	1.561	2.768	0.09187	0.29045
RegionR5	1.409	2.768	0.06065	0.21478
RegionR6	0.74	2.768	0.43635	0.99743
RegionR7	1.203	2.768	0.25627	0.88300
RegionR8	0.87	2.768	0.51521	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.721	2.768	0.99992	1.00000
RegenerationR2	0.625	2.768	0.23743	0.68549
RegenerationR3	0.893	2.768	0.20517	0.64035
RegenerationR4	-0.13	2.768	0.82744	0.99660
RegenerationR5	0.373	2.768	0.47908	0.84646
RegenerationR6	0.435	2.768	0.48504	0.79514
RegenerationBL	-0.576	2.768	0.48022	0.84547
RegenerationTP	-0.534	2.768	0.55824	0.93767

Genes with expression patterns similar to MligTC455_53726

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53726	206	4.3	Mlig455_025696	Neo: - Age: Down-Down-Up	RBCK1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025696 {REF} {Length: 2805} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=36.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.6]; Ring finger domain [PF13639.8, score=20.1]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [Score=191, Expect=4e-57]} {Mouse: ENSMUSG00000027466, Rbck1, RanBP-type and C3HC4-type zinc finger containing 1, [Score=189, Expect=2e-56]} {Smed: dd_Smed_v6_1293_0_1, dd_Smed_v6_1293_0_1, [Score=244, Expect=1e-78]} {RNA1509_40724} {RNA1310_9208.1} {RNA815_11140}
2.	MligTC455_50548	651	13.56	Mlig455_039553, Mlig455_051358	Neo: - Age: logFC(26M/2M)=0.261	MRI1	1.83	-	-	0.851	-	-	0.979	Mlig455_039553 {REF} {Length: 2475} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=256.7]} {Human: ENSG00000037757, MRI1, methylthioribose-1-phosphate isomerase 1, [RH, Score=364, Expect=2e-124]} {Mouse: ENSMUSG00000004996, Mri1, methylthioribose-1-phosphate isomerase 1, [RH, Score=355, Expect=5e-121]} {Dmel: FBgn0039849, CG11334, [RH, Score=379, Expect=1e-130]} {Celegans: WBGene00007236, C01G10.9, Methylthioribose-1-phosphate isomerase, [RH, Score=268, Expect=3e-87]} {RNA1509_13437, RNA1509_22125} {RNA1310_17445.2, RNA1509_22125} {RNA1509_22125, RNA815_10627.1} Mlig455_051358 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=257.4]} {Human: ENSG00000037757, MRI1, methylthioribose-1-phosphate isomerase 1, [RH, Score=367, Expect=1e-125]} {Mouse: ENSMUSG00000004996, Mri1, methylthioribose-1-phosphate isomerase 1, [RH, Score=358, Expect=4e-122]} {Dmel: FBgn0039849, CG11334, [RH, Score=380, Expect=3e-131]} {Celegans: WBGene00007236, C01G10.9, Methylthioribose-1-phosphate isomerase, [RH, Score=270, Expect=6e-88]} {RNA1509_13437} {RNA1310_17445.2, RNA1509_13437} {RNA1509_13437, RNA815_10627.1}
3.	MligTC455_26373	192	4	Mlig455_026052	Neo: - Age: -	RNPC3	1.804	-	-	-	-	0.953	0.851	Mlig455_026052 {REF} {Length: 1639} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.8]; RRM-like domain [PF11835.10, score=19.7]} {Human: ENSG00000185946, RNPC3, RNA binding region (RNP1, RRM) containing 3, [RH, Score=80.1, Expect=2e-15]} {Mouse: ENSMUSG00000027981, Rnpc3, RNA-binding region (RNP1, RRM) containing 3, [RH, Score=82.4, Expect=2e-16]} {Dmel: FBgn0265184, CG44249, [RH, Score=76.3, Expect=1e-14]} {Smed: dd_Smed_v6_13366_0_2, dd_Smed_v6_13366_0_2, [RH, Score=60.8, Expect=8e-10]} {RNA1310_16484.1} {RNA815_22075}
4.	MligTC455_50152	714	14.88	Mlig455_061604	Neo: - Age: Down-Up-Down Region-enriched R4: 1.803/0.00026	MPC2	0.964	-	-	-	-	0.964	-	Mlig455_061604 {REF} {Length: 1611} {TRANSSPLICED} {Pfam: Mitochondrial pyruvate carriers [PF03650.15, score=143.4]} {Human: ENSG00000143158, MPC2, mitochondrial pyruvate carrier 2, [RH, Score=145, Expect=1e-45]} {Mouse: ENSMUSG00000026568, Mpc2, mitochondrial pyruvate carrier 2, [RH, Score=130, Expect=4e-40]} {Dmel: FBgn0037715, CG9399, [RH, Score=151, Expect=6e-48]} {Celegans: WBGene00018765, mpc-2, Probable mitochondrial pyruvate carrier 2, [RH, Score=137, Expect=6e-43]} {Smed: dd_Smed_v6_6084_0_1, dd_Smed_v6_6084_0_1, [RH, Score=179, Expect=7e-60]} {RNA1509_19569, RNA1509_38340, RNA1509_9799} {RNA1310_57693.1, RNA1509_38340, RNA1509_9799} {RNA1509_38340, RNA1509_9799, RNA815_30843}
5.	MligTC455_34911	1974	41.12	Mlig455_018730, Mlig455_018752, Mlig455_018920	Neo: Irradiation Age: - Region-specific R4: 2.878 Region-enriched R4: 2.803/0.00000 Regeneration-downregulated R4: -1.908 Regeneration-depleted R4: -1.908	ACYP1	0.963	-	-	-	-	0.963	-	Mlig455_018730 {REF} {Length: 1504} {TRANSSPLICED} {Pfam: Acylphosphatase [PF00708.20, score=81.0]} {Human: ENSG00000119640, ACYP1, acylphosphatase 1, [RH, Score=105, Expect=5e-30]} {Mouse: ENSMUSG00000008822, Acyp1, acylphosphatase 1, erythrocyte (common) type, [RH, Score=103, Expect=1e-29]} {Dmel: FBgn0085190, CG34161, [RH, Score=92.4, Expect=5e-25]} {Smed: dd_Smed_v6_4021_0_2, dd_Smed_v6_4021_0_2, [RH, Score=87.4, Expect=2e-23]} {RNA1509_9648} {RNA1310_21302, RNA1509_9648} {RNA1509_9648, RNA815_22307} Mlig455_018752 {REF} {Length: 735} {TRANSSPLICED} {Pfam: Acylphosphatase [PF00708.20, score=77.5]} {Human: ENSG00000119640, ACYP1, acylphosphatase 1, [Score=98.6, Expect=6e-27]} {Mouse: ENSMUSG00000008822, Acyp1, acylphosphatase 1, erythrocyte (common) type, [Score=97.1, Expect=7e-27]} {Dmel: FBgn0085190, CG34161, [RH, Score=92.4, Expect=5e-25]} {Smed: dd_Smed_v6_4021_0_2, dd_Smed_v6_4021_0_2, [Score=80.5, Expect=9e-21]} {RNA1509_46869} {RNA1310_21302, RNA1509_46869} {RNA1509_46869, RNA815_22307} Mlig455_018920 {REF} {Length: 874} {TRANSSPLICED} {Pfam: Acylphosphatase [PF00708.20, score=81.0]} {Human: ENSG00000119640, ACYP1, acylphosphatase 1, [RH, Score=105, Expect=5e-30]} {Mouse: ENSMUSG00000008822, Acyp1, acylphosphatase 1, erythrocyte (common) type, [RH, Score=103, Expect=1e-29]} {Dmel: FBgn0085190, CG34161, [RH, Score=92.8, Expect=4e-25]} {Smed: dd_Smed_v6_4021_0_2, dd_Smed_v6_4021_0_2, [RH, Score=87.4, Expect=2e-23]} {RNA1509_9648} {RNA1310_21302} {RNA815_22307}
6.	MligTC455_32342	680	14.16	Mlig455_013465	Neo: Int S/G2/M Age: - Region-enriched R4: 1.913/0.00241	EIF2AK1	0.955	-	-	-	-	0.955	-	Mlig455_013465 {REF} {Length: 4319} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=146.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=88.8]} {Human: ENSG00000086232, EIF2AK1, eukaryotic translation initiation factor 2 alpha kinase 1, [RH, Score=177, Expect=6e-47]} {Mouse: ENSMUSG00000029613, Eif2ak1, eukaryotic translation initiation factor 2 alpha kinase 1, [RH, Score=139, Expect=5e-34]} {Dmel: FBgn0037327, PEK, pancreatic eIF-2alpha kinase, [Score=165, Expect=4e-42]} {Celegans: WBGene00003970, pek-1, Eukaryotic translation initiation factor 2-alpha kinase pek-1, [Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_8210_0_1, dd_Smed_v6_8210_0_1, [Score=142, Expect=1e-34]} {RNA1509_13116, RNA1509_17895, RNA1509_33519, RNA1509_48018} {RNA1310_9794.1, RNA1509_13116, RNA1509_17895, RNA1509_33519, RNA1509_48018} {RNA1509_13116, RNA1509_17895, RNA1509_33519, RNA1509_48018, RNA815_2641}
7.	MligTC455_51985	306	6.38	Mlig455_026161	Neo: - Age: logFC(26M/2M)=-0.411		0.955	-	-	-	-	0.955	-	Mlig455_026161 {REF} {Length: 3131} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=39.8]} {Smed: dd_Smed_v6_3423_0_1, dd_Smed_v6_3423_0_1, [Score=78.6, Expect=6e-17]} {RNA1509_23666} {RNA1310_19234.2} {RNA815_18307}
8.	MligTC455_53815	39	0.8	Mlig455_060920	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_060920 {REF} {Length: 1189} {RNA1509_22316} {RNA1310_77656} {RNA815_47119}
9.	MligTC455_24040	77	1.6	Mlig455_033510	Neo: - Age: - Region-enriched R7: 5.524/0.00162		0.954	-	-	-	-	0.954	-	Mlig455_033510 {REF} {Length: 2880} {NoTransDecoderORF} {RNA1509_50322} {RNA1310_68317} {RNA815_47997}
10.	MligTC455_03083	272	5.67	Mlig455_016618	Neo: - Age: -	PTRH2	0.953	-	-	-	-	-	0.953	Mlig455_016618 {REF} {Length: 2248} {TRANSSPLICED} {Pfam: Peptidyl-tRNA hydrolase PTH2 [PF01981.18, score=128.5]} {Human: ENSG00000141378, PTRH2, peptidyl-tRNA hydrolase 2, [Score=121, Expect=9e-35]} {Mouse: ENSMUSG00000072582, Ptrh2, peptidyl-tRNA hydrolase 2, [Score=120, Expect=2e-34]} {Dmel: FBgn0038107, CG17327, [Score=117, Expect=4e-34]} {Celegans: WBGene00016062, C24G6.8, Probable peptidyl-tRNA hydrolase 2, [Score=63.5, Expect=3e-12]} {Smed: dd_Smed_v6_2074_0_1, dd_Smed_v6_2074_0_1, [Score=103, Expect=1e-28]} {RNA1509_31194, RNA1509_43124, RNA1509_44972} {RNA1310_37712, RNA1509_31194, RNA1509_44972} {RNA1509_31194, RNA1509_44972, RNA815_17649}
11.	MligTC455_20299	295	6.15	Mlig455_059102	Neo: - Age: -	SLC17A5	0.953	-	-	-	-	-	0.953	Mlig455_059102 {REF} {Length: 2831} {Pfam: Major Facilitator Superfamily [PF07690.18, score=144.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=26.7]; Sugar (and other) transporter [PF00083.26, score=20.2]} {Human: ENSG00000119899, SLC17A5, solute carrier family 17 member 5, [Score=186, Expect=2e-53]} {Mouse: ENSMUSG00000049624, Slc17a5, solute carrier family 17 (anion/sugar transporter), member 5, [Score=181, Expect=2e-51]} {Dmel: FBgn0038799, MFS9, Major Facilitator Superfamily Transporter 9, [Score=159, Expect=1e-43]} {Celegans: WBGene00022647, slc-17.1, SLC (SoLute Carrier) homolog, [Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_6845_0_1, dd_Smed_v6_6845_0_1, [RH, Score=494, Expect=2e-174]} {RNA1509_39490} {RNA1310_17100} {RNA815_9623}
12.	MligTC455_44511	383	7.98	Mlig455_009880	Neo: Int S/G2/M Age: - Region-enriched R4: 1.818/0.00787	DTD1	0.953	-	-	-	-	0.953	-	Mlig455_009880 {REF} {Length: 2250} {TRANSSPLICED} {Pfam: D-Tyr-tRNA(Tyr) deacylase [PF02580.18, score=170.7]} {Human: ENSG00000125821, DTD1, D-tyrosyl-tRNA deacylase 1, [RH, Score=166, Expect=2e-52]} {Mouse: ENSMUSG00000027430, Dtd1, D-tyrosyl-tRNA deacylase 1, [RH, Score=164, Expect=1e-51]} {Dmel: FBgn0037898, CG18643, [RH, Score=156, Expect=3e-49]} {Celegans: WBGene00004151, pqn-68, D-tyrosyl-tRNA(Tyr) deacylase, [RH, Score=160, Expect=6e-51]} {Smed: dd_Smed_v6_9062_0_1, dd_Smed_v6_9062_0_1, [RH, Score=164, Expect=2e-52]} {RNA1509_13265, RNA1509_3678, RNA1509_52418} {RNA1310_26124.1, RNA1509_13265, RNA1509_52418} {RNA1509_13265, RNA1509_52418, RNA815_14180.1}
13.	MligTC455_31084	474	9.88	Mlig455_012944	Neo: - Age: -	ZFAND4	0.95	-	-	-	-	0.950	-	Mlig455_012944 {REF} {Length: 4931} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=53.0]; AN1-like Zinc finger [PF01428.18, score=38.0]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=24.5]} {Human: ENSG00000172671, ZFAND4, zinc finger AN1-type containing 4, [RH, Score=146, Expect=8e-38]} {Mouse: ENSMUSG00000042213, Zfand4, zinc finger, AN1-type domain 4, [RH, Score=146, Expect=6e-38]} {Dmel: FBgn0266410, CG45050, [Score=75.9, Expect=6e-16]} {Celegans: WBGene00009050, F22D6.2, [Score=83.2, Expect=1e-18]} {Smed: dd_Smed_v6_4992_0_1, dd_Smed_v6_4992_0_1, [RH, Score=142, Expect=6e-38]} {RNA1509_13250} {RNA1310_20411} {RNA815_6580}
14.	MligTC455_37237	118	2.46	Mlig455_053782	Neo: - Age: -	ABTB1	0.95	-	-	-	-	-	0.950	Mlig455_053782 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=95.5]} {Human: ENSG00000114626, ABTB1, ankyrin repeat and BTB domain containing 1, [RH, Score=184, Expect=1e-53]} {Mouse: ENSMUSG00000030083, Abtb1, ankyrin repeat and BTB (POZ) domain containing 1, [Score=171, Expect=1e-48]} {Dmel: FBgn0040038, klhl10, kelch like family member 10, [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_7778_0_1, dd_Smed_v6_7778_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_58824} {RNA1310_20025, RNA1509_58824}

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