Data search
Results for MligTC455_53848
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53848 | 13171 | 274.40 | Mlig455_043899 | Neo: Int S/G2/M |
Mlig455_043899 {REF} {Length: 1461} {Pfam: linker histone H1 and H5 family [PF00538.21, score=95.2]} {Mouse: ENSMUSG00000096210, H1f0, H1 histone family, member 0, [RH, Score=92.4, Expect=8e-23]} {Dmel: FBgn0053825, His1:CG33825, [Score=64.7, Expect=3e-12]} {Celegans: WBGene00001856, hil-5, Histone H1.5, [RH, Score=79.3, Expect=8e-18]} {Smed: dd_Smed_v6_601_0_1, dd_Smed_v6_601_0_1, [Score=53.5, Expect=1e-08]} {RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822} {RNA1310_21772.1, RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822} {RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822, RNA815_8088} |
Cumulative graph for MligTC455_53848
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.183 | 8.077 | 0.00315 | 0.18100 | |
| RegionR2 | -0.567 | 8.077 | 0.02537 | 0.17840 | |
| RegionR3 | -0.063 | 8.077 | 0.77460 | 1.00000 | |
| RegionR4 | 0.536 | 8.077 | 0.03755 | 0.15902 | |
| RegionR5 | -0.61 | 8.077 | 0.00745 | 0.04665 | |
| RegionR6 | 0.33 | 8.077 | 0.12508 | 0.64332 | |
| RegionR7 | 0.982 | 8.077 | 0.00000 | 0.00025 | |
| RegionR8 | 0.575 | 8.077 | 0.01568 | 0.24385 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.649 | 8.077 | 0.17102 | 0.91495 | |
| RegenerationR2 | 0.366 | 8.077 | 0.17837 | 0.62019 | |
| RegenerationR3 | -0.105 | 8.077 | 0.70689 | 0.95026 | |
| RegenerationR4 | -0.157 | 8.077 | 0.58751 | 0.90780 | |
| RegenerationR5 | 0.132 | 8.077 | 0.63689 | 0.92542 | |
| RegenerationR6 | 0.319 | 8.077 | 0.25114 | 0.60079 | |
| RegenerationBL | 0.871 | 8.077 | 0.00014 | 0.00580 | |
| RegenerationTP | -0.203 | 8.077 | 0.43098 | 0.85339 |
Genes with expression patterns similar to MligTC455_53848
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53848 | 13171 | 274.4 | Mlig455_043899 | Neo: Int S/G2/M |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_043899 {REF} {Length: 1461} {Pfam: linker histone H1 and H5 family [PF00538.21, score=95.2]} {Mouse: ENSMUSG00000096210, H1f0, H1 histone family, member 0, [RH, Score=92.4, Expect=8e-23]} {Dmel: FBgn0053825, His1:CG33825, [Score=64.7, Expect=3e-12]} {Celegans: WBGene00001856, hil-5, Histone H1.5, [RH, Score=79.3, Expect=8e-18]} {Smed: dd_Smed_v6_601_0_1, dd_Smed_v6_601_0_1, [Score=53.5, Expect=1e-08]} {RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822} {RNA1310_21772.1, RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822} {RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822, RNA815_8088} | |
| 2. | MligTC455_42626 | 3871 | 80.64 | Mlig455_022010, Mlig455_022016, Mlig455_058844 | Neo: - Age: - Region-enriched R8: 5.333/0.00000 |
NGFR | 3.143 | 0.705 | - | - | 0.973 | 0.737 | 0.728 | Mlig455_022010 {REF} {Length: 2807} {Pfam: Death domain [PF00531.24, score=43.7]; TNFR/NGFR cysteine-rich region [PF00020.20, score=39.8]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.9]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=21.0]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [RH, Score=87.4, Expect=7e-18]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [RH, Score=90.9, Expect=3e-19]} {RNA1509_51303} {RNA1310_14301} {RNA815_11451.1} Mlig455_022016 {REF} {Length: 2180} {Pfam: Death domain [PF00531.24, score=43.4]; TNFR/NGFR cysteine-rich region [PF00020.20, score=36.4]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.6]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [Score=88.2, Expect=4e-18]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [Score=58.9, Expect=8e-09]} {RNA1509_53598} {RNA1310_15008} {RNA815_11451.1} Mlig455_058844 {REF} {Length: 2237} {Pfam: Death domain [PF00531.24, score=43.5]; TNFR/NGFR cysteine-rich region [PF00020.20, score=37.8]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.9]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [RH, Score=96.3, Expect=7e-21]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [RH, Score=99.4, Expect=5e-22]} {RNA1509_26617} {RNA1310_14301} {RNA815_26191} |
| 3. | MligTC455_52576 | 9086 | 189.28 | Mlig455_033217 | Neo: - Age: Down-Down-Up |
RPL6 | 2.563 | - | - | - | 0.802 | 0.792 | 0.969 | Mlig455_033217 {REF} {Length: 1506} {Pfam: Ribosomal protein L6e [PF01159.21, score=115.5]; EF hand [PF00036.34, score=44.6]; EF-hand domain pair [PF13499.8, score=43.7]; EF hand [PF13202.8, score=38.9]; EF-hand domain [PF13405.8, score=34.9]; EF-hand domain pair [PF13833.8, score=22.9]; Ribosomal protein L6, N-terminal domain [PF03868.17, score=19.7]} {Human: ENSG00000089009, RPL6, ribosomal protein L6, [RH, Score=209, Expect=5e-65]} {Mouse: ENSMUSG00000029614, Rpl6, ribosomal protein L6, [RH, Score=207, Expect=2e-64]} {Dmel: FBgn0039857, RpL6, Ribosomal protein L6, [RH, Score=208, Expect=2e-65]} {Celegans: WBGene00004417, rpl-6, 60S ribosomal protein L6, [RH, Score=162, Expect=4e-48]} {Smed: dd_Smed_v6_205_0_1, dd_Smed_v6_205_0_1, [RH, Score=201, Expect=1e-63]} {RNA1509_16099, RNA1509_3130} {RNA1310_25136.1, RNA1509_16099, RNA1509_3130} {RNA1509_16099, RNA1509_3130, RNA815_9531} |
| 4. | MligTC455_47052 | 3864 | 80.49 | Mlig455_070925 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.887 Regeneration-upregulated BL: 2.164 Regeneration-enriched BL: 2.164 |
1.675 | - | - | - | 0.723 | 0.952 | - | Mlig455_070925 {REF} {Length: 2072} {Pfam: F5/8 type C domain [PF00754.27, score=55.1]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_15305} {RNA1310_30437.2} {RNA815_12353} | |
| 5. | MligTC455_30213 | 8844 | 184.24 | Mlig455_010339 | Neo: - Age: logFC(26M/2M)=0.253 Region-enriched R5: 1.368/0.00000 Regeneration-upregulated BL: 1.090 Regeneration-enriched BL: 1.090 |
SEC61B | 0.966 | - | - | - | 0.966 | - | - | Mlig455_010339 {REF} {Length: 1341} {Pfam: Sec61beta family [PF03911.18, score=69.2]} {Human: ENSG00000106803, SEC61B, Sec61 translocon beta subunit, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000092116, Gm10320, predicted pseudogene 10320, [RH, Score=126, Expect=7e-39]; ENSMUSG00000053317, Sec61b, Sec61 beta subunit, [RH, Score=126, Expect=3e-39]} {Dmel: FBgn0010638, Sec61beta, Sec61 beta subunit, [RH, Score=108, Expect=4e-32]} {Celegans: WBGene00021427, Y38F2AR.9, Protein transport protein Sec61 subunit beta, [RH, Score=92.4, Expect=4e-26]} {Smed: dd_Smed_v6_418_0_1, dd_Smed_v6_418_0_1, [RH, Score=112, Expect=5e-34]} {RNA1509_12138, RNA1509_2065, RNA1509_36570} {RNA1310_29478.1, RNA1509_12138, RNA1509_2065, RNA1509_36570} {RNA1509_12138, RNA1509_2065, RNA1509_36570, RNA815_15688} |
| 6. | MligTC455_30212 | 8627 | 179.72 | Mlig455_009854 | Neo: - Age: logFC(26M/2M)=0.529 Region-enriched R5: 1.330/0.00000 Regeneration-upregulated BL: 1.070 Regeneration-enriched BL: 1.070 |
SEC61B | 0.962 | - | - | - | 0.962 | - | - | Mlig455_009854 {REF} {Length: 2918} {Pfam: Sec61beta family [PF03911.18, score=68.2]} {Human: ENSG00000106803, SEC61B, Sec61 translocon beta subunit, [RH, Score=126, Expect=9e-38]} {Mouse: ENSMUSG00000092116, Gm10320, predicted pseudogene 10320, [RH, Score=127, Expect=5e-38]; ENSMUSG00000053317, Sec61b, Sec61 beta subunit, [RH, Score=125, Expect=2e-37]} {Dmel: FBgn0010638, Sec61beta, Sec61 beta subunit, [RH, Score=108, Expect=9e-31]} {Celegans: WBGene00021427, Y38F2AR.9, Protein transport protein Sec61 subunit beta, [RH, Score=93.2, Expect=3e-25]} {Smed: dd_Smed_v6_418_0_1, dd_Smed_v6_418_0_1, [RH, Score=110, Expect=1e-31]} {RNA1509_12138, RNA1509_20916, RNA1509_4964} {RNA1310_29478.1, RNA1509_20916, RNA1509_4964} {RNA1509_20916, RNA1509_4964, RNA815_15688} |
| 7. | MligTC455_38945 | 3598 | 74.95 | Mlig455_019505 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.260 Region-enriched R7: 1.955/0.00000 |
HSP90B1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_019505 {REF} {Length: 4318} {Pfam: Hsp90 protein [PF00183.20, score=709.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=49.3]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.1]} {Human: ENSG00000166598, HSP90B1, heat shock protein 90 beta family member 1, [RH, Score=894, Expect=0.0]} {Mouse: ENSMUSG00000020048, Hsp90b1, heat shock protein 90, beta (Grp94), member 1, [RH, Score=909, Expect=0.0]} {Dmel: FBgn0039562, Gp93, Glycoprotein 93, [RH, Score=885, Expect=0.0]} {Celegans: WBGene00011480, enpl-1, Endoplasmin homolog, [RH, Score=845, Expect=0.0]} {Smed: dd_Smed_v6_758_1_1, dd_Smed_v6_758_1_1, [RH, Score=979, Expect=0.0]} {RNA1509_34044, RNA1509_37551, RNA1509_537} {RNA1310_2681, RNA1509_34044, RNA1509_37551} {RNA1509_34044, RNA1509_37551, RNA815_1298.2} |
| 8. | MligTC455_35647 | 11544 | 240.5 | Mlig455_044426 | Neo: Int S/G2/M Age: - |
CALR | 0.951 | - | - | - | 0.951 | - | - | Mlig455_044426 {REF} {Length: 2103} {Pfam: Calreticulin family [PF00262.20, score=127.0]} {Human: ENSG00000179218, CALR, calreticulin, [Score=296, Expect=2e-98]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [Score=295, Expect=4e-98]} {Dmel: FBgn0005585, Calr, Calreticulin, [Score=293, Expect=1e-97]} {Celegans: WBGene00000802, crt-1, Calreticulin, [Score=259, Expect=7e-85]} {Smed: dd_Smed_v6_220_0_4, dd_Smed_v6_220_0_4, [Score=309, Expect=3e-104]} {RNA1509_145, RNA1509_1526, RNA1509_2312, RNA1509_30582} {RNA1310_7869, RNA1509_1526, RNA1509_2312, RNA1509_30582} {RNA1509_1526, RNA1509_2312, RNA1509_30582, RNA815_3522.1} |
| 9. | MligTC455_33928 | 2053 | 42.76 | Mlig455_022325 | Neo: Irradiation Age: - Region-enriched R8: 1.618/0.04266 Regeneration-upregulated BL: 2.077 Regeneration-enriched BL: 2.077 |
AXIN2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_022325 {REF} {Length: 3687} {Pfam: DIX domain [PF00778.19, score=95.1]; Regulator of G protein signaling domain [PF00615.21, score=38.2]} {Human: ENSG00000168646, AXIN2, axin 2, [RH, Score=105, Expect=1e-22]; ENSG00000103126, AXIN1, axin 1, [RH, Score=102, Expect=8e-22]} {Mouse: ENSMUSG00000000142, Axin2, axin 2, [RH, Score=111, Expect=1e-24]} {Dmel: FBgn0026597, Axn, Axin, [RH, Score=68.6, Expect=1e-11]} {Smed: dd_Smed_v6_4900_0_1, dd_Smed_v6_4900_0_1, [RH, Score=114, Expect=2e-26]} {RNA1509_3308} {RNA1310_3892.1} {RNA815_6916} |
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