TomoSeq data search

Data search

Results for MligTC455_52576

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52576

9086

189.28

Mlig455_033217

Neo: -

Age: Down-Down-Up

RPL6

Mlig455_033217 {REF} {Length: 1506} {Pfam: Ribosomal protein L6e [PF01159.21, score=115.5]; EF hand [PF00036.34, score=44.6]; EF-hand domain pair [PF13499.8, score=43.7]; EF hand [PF13202.8, score=38.9]; EF-hand domain [PF13405.8, score=34.9]; EF-hand domain pair [PF13833.8, score=22.9]; Ribosomal protein L6, N-terminal domain [PF03868.17, score=19.7]} {Human: ENSG00000089009, RPL6, ribosomal protein L6, [RH, Score=209, Expect=5e-65]} {Mouse: ENSMUSG00000029614, Rpl6, ribosomal protein L6, [RH, Score=207, Expect=2e-64]} {Dmel: FBgn0039857, RpL6, Ribosomal protein L6, [RH, Score=208, Expect=2e-65]} {Celegans: WBGene00004417, rpl-6, 60S ribosomal protein L6, [RH, Score=162, Expect=4e-48]} {Smed: dd_Smed_v6_205_0_1, dd_Smed_v6_205_0_1, [RH, Score=201, Expect=1e-63]} {RNA1509_16099, RNA1509_3130} {RNA1310_25136.1, RNA1509_16099, RNA1509_3130} {RNA1509_16099, RNA1509_3130, RNA815_9531}

Cumulative graph for MligTC455_52576

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.075	7.621	0.00584	0.23620
RegionR2	0.13	7.621	0.55237	0.91770
RegionR3	0.181	7.621	0.32938	0.86727
RegionR4	0.103	7.621	0.63019	0.93850
RegionR5	-0.481	7.621	0.01161	0.06437
RegionR6	0.693	7.621	0.00013	0.00977
RegionR7	0.538	7.621	0.00616	0.12652
RegionR8	-0.09	7.621	0.71225	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.471	7.621	0.39407	1.00000
RegenerationR2	-0.075	7.621	0.73750	0.96879
RegenerationR3	-0.225	7.621	0.33429	0.75928
RegenerationR4	-0.122	7.621	0.60655	0.91587
RegenerationR5	-0.007	7.621	0.97586	1.00000
RegenerationR6	-0.164	7.621	0.47543	0.78842
RegenerationBL	0.628	7.621	0.00219	0.03851
RegenerationTP	0.056	7.621	0.80876	1.00000

Genes with expression patterns similar to MligTC455_52576

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52576	9086	189.28	Mlig455_033217	Neo: - Age: Down-Down-Up	RPL6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_033217 {REF} {Length: 1506} {Pfam: Ribosomal protein L6e [PF01159.21, score=115.5]; EF hand [PF00036.34, score=44.6]; EF-hand domain pair [PF13499.8, score=43.7]; EF hand [PF13202.8, score=38.9]; EF-hand domain [PF13405.8, score=34.9]; EF-hand domain pair [PF13833.8, score=22.9]; Ribosomal protein L6, N-terminal domain [PF03868.17, score=19.7]} {Human: ENSG00000089009, RPL6, ribosomal protein L6, [RH, Score=209, Expect=5e-65]} {Mouse: ENSMUSG00000029614, Rpl6, ribosomal protein L6, [RH, Score=207, Expect=2e-64]} {Dmel: FBgn0039857, RpL6, Ribosomal protein L6, [RH, Score=208, Expect=2e-65]} {Celegans: WBGene00004417, rpl-6, 60S ribosomal protein L6, [RH, Score=162, Expect=4e-48]} {Smed: dd_Smed_v6_205_0_1, dd_Smed_v6_205_0_1, [RH, Score=201, Expect=1e-63]} {RNA1509_16099, RNA1509_3130} {RNA1310_25136.1, RNA1509_16099, RNA1509_3130} {RNA1509_16099, RNA1509_3130, RNA815_9531}
2.	MligTC455_53848	13171	274.4	Mlig455_043899	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.523		2.563	-	-	-	0.802	0.792	0.969	Mlig455_043899 {REF} {Length: 1461} {Pfam: linker histone H1 and H5 family [PF00538.21, score=95.2]} {Mouse: ENSMUSG00000096210, H1f0, H1 histone family, member 0, [RH, Score=92.4, Expect=8e-23]} {Dmel: FBgn0053825, His1:CG33825, [Score=64.7, Expect=3e-12]} {Celegans: WBGene00001856, hil-5, Histone H1.5, [RH, Score=79.3, Expect=8e-18]} {Smed: dd_Smed_v6_601_0_1, dd_Smed_v6_601_0_1, [Score=53.5, Expect=1e-08]} {RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822} {RNA1310_21772.1, RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822} {RNA1509_14181, RNA1509_17023, RNA1509_18379, RNA1509_18394, RNA1509_26253, RNA1509_28785, RNA1509_44806, RNA1509_48932, RNA1509_8272, RNA1509_8822, RNA815_8088}
3.	MligTC455_43146	115	2.4	Mlig455_060367	Neo: - Age: -	TTLL1	0.964	-	-	-	-	0.964	-	Mlig455_060367 {REF} {Length: 2158} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=367.4]; YheC/D like ATP-grasp [PF14398.8, score=28.5]; Sugar-transfer associated ATP-grasp [PF14397.8, score=25.3]} {Human: ENSG00000100271, TTLL1, tubulin tyrosine ligase like 1, [RH, Score=616, Expect=0.0]} {Mouse: ENSMUSG00000022442, Ttll1, tubulin tyrosine ligase-like 1, [RH, Score=615, Expect=0.0]} {Dmel: FBgn0052238, CG32238, [RH, Score=587, Expect=0.0]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=282, Expect=5e-91]} {Smed: dd_Smed_v6_11158_0_1, dd_Smed_v6_11158_0_1, [RH, Score=636, Expect=0.0]} {RNA1509_56177, RNA1509_9729} {RNA1310_12326.1, RNA1509_56177, RNA1509_9729} {RNA1509_56177, RNA1509_9729, RNA815_11282}
4.	MligTC455_10372	4993	104.02	Mlig455_028602	Neo: Int S/G2/M Age: Down-Down-Down, logFC(26M/2M)=-0.968	COPE	0.952	-	-	-	0.952	-	-	Mlig455_028602 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Coatomer epsilon subunit [PF04733.16, score=347.5]; Tetratricopeptide repeat [PF14559.8, score=26.0]; Tetratricopeptide repeat [PF13428.8, score=25.1]; Tetratricopeptide repeat [PF13424.8, score=24.5]; Tetratricopeptide repeat [PF07719.19, score=23.8]; Tetratricopeptide repeat [PF13432.8, score=22.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=20.3]; Tetratricopeptide repeat [PF13176.8, score=19.2]; Tetratricopeptide repeat [PF00515.30, score=18.3]} {Human: ENSG00000105669, COPE, coatomer protein complex subunit epsilon, [RH, Score=335, Expect=6e-115]} {Mouse: ENSMUSG00000055681, Cope, coatomer protein complex, subunit epsilon, [RH, Score=332, Expect=7e-114]} {Dmel: FBgn0027496, epsilonCOP, Coat Protein (coatomer) epsilon, [RH, Score=168, Expect=4e-50]} {Celegans: WBGene00009732, cope-1, Coatomer subunit epsilon, [RH, Score=178, Expect=4e-54]} {Smed: dd_Smed_v6_1956_0_1, dd_Smed_v6_1956_0_1, [RH, Score=269, Expect=1e-89]} {RNA1509_3221} {RNA1310_24235.1} {RNA815_10191.1}

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