Data search
Results for MligTC455_53917
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53917 | 27 | 0.57 | Mlig455_001012 | Neo: - Age: - |
Mlig455_001012 {REF} {Length: 1524} {RNA1310_19123.2} {RNA815_14746.1} |
Cumulative graph for MligTC455_53917
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.178 | 0.914 | 0.99946 | 1.00000 | |
| RegionR2 | 0.001 | 0.914 | 1.00000 | 1.00000 | |
| RegionR3 | 0.352 | 0.914 | 0.99973 | 1.00000 | |
| RegionR4 | 0.508 | 0.914 | 0.99940 | 1.00000 | |
| RegionR5 | 0.592 | 0.914 | 0.99970 | 1.00000 | |
| RegionR6 | 0.455 | 0.914 | 0.99965 | 1.00000 | |
| RegionR7 | -0.162 | 0.914 | 1.00000 | 1.00000 | |
| RegionR8 | -0.568 | 0.914 | 0.99996 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.394 | 0.914 | 1.00000 | 1.00000 | |
| RegenerationR2 | 2.977 | 0.914 | 0.28724 | 0.73009 | |
| RegenerationR3 | 4.536 | 0.914 | 0.23218 | 0.66673 | |
| RegenerationR4 | 3.358 | 0.914 | 0.32168 | 0.75975 | |
| RegenerationR5 | 3.11 | 0.914 | 0.29446 | 0.72219 | |
| RegenerationR6 | 3.161 | 0.914 | 0.35947 | 0.70407 | |
| RegenerationBL | 2.972 | 0.914 | 0.37599 | 0.74451 | |
| RegenerationTP | 4.713 | 0.914 | 0.29283 | 0.73804 |
Genes with expression patterns similar to MligTC455_53917
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53917 | 27 | 0.57 | Mlig455_001012 | Neo: - Age: - |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_001012 {REF} {Length: 1524} {RNA1310_19123.2} {RNA815_14746.1} | |
| 2. | MligTC455_14625 | 12 | 0.24 | Mlig455_045049 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_045049 {REF} {Length: 1923} | |
| 3. | MligTC455_50441 | 689 | 14.36 | Mlig455_027630 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.495 Regeneration-downregulated R2: -1.945 Regeneration-depleted R2: -1.945 |
HPCA | 0.963 | - | - | - | - | 0.963 | - | Mlig455_027630 {REF} {Length: 1890} {Pfam: EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF00036.34, score=84.1]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF13202.8, score=62.0]; EF-hand domain pair [PF13833.8, score=39.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=38.6]} {Human: ENSG00000121905, HPCA, hippocalcin, [Score=45.4, Expect=4e-06]} {Mouse: ENSMUSG00000028785, Hpca, hippocalcin, [Score=45.4, Expect=3e-06]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=43.9, Expect=1e-05]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=64.3, Expect=1e-13]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=63.9, Expect=1e-13]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [Score=107, Expect=8e-31]} {RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386} {RNA1310_32234, RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386} {RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386, RNA815_22377.1} |
| 4. | MligTC455_30153 | 63 | 1.31 | Mlig455_064467 | Neo: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_064467 {REF} {Length: 4501} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=66.2, Expect=6e-13]} {RNA1509_47056, RNA1509_59369} {RNA1310_5710.1, RNA1509_59369} {RNA1509_59369, RNA815_15609} | |
| 5. | MligTC455_25052 | 180 | 3.74 | Mlig455_029793 | Neo: - Age: Up-Down-Down |
HERC2 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_029793 {REF} {Length: 16855} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=518.2]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=184.0]; HECT-domain (ubiquitin-transferase) [PF00632.27, score=180.6]; Mib_herc2 [PF06701.15, score=64.9]; Mouse development and cellular proliferation protein Cullin-7 [PF11515.10, score=63.4]; Zinc finger, ZZ type [PF00569.19, score=26.4]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=23.5]} {Human: ENSG00000128731, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=2195, Expect=0.0]} {Mouse: ENSMUSG00000030451, Herc2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=2200, Expect=0.0]} {Dmel: FBgn0031107, HERC2, HECT and RLD domain containing protein 2, [RH, Score=1271, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [Score=116, Expect=3e-26]} {Smed: dd_Smed_v6_3885_0_1, dd_Smed_v6_3885_0_1, [RH, Score=1098, Expect=0.0]} {RNA1509_2217, RNA1509_26920} {RNA1310_95.1, RNA1509_2217, RNA1509_26920} {RNA1509_2217, RNA1509_26920, RNA815_620} |
| 6. | MligTC455_51271 | 681 | 14.19 | Mlig455_021899, Mlig455_021976, Mlig455_022029 | Neo: - Age: - Region-specific R2: 6.767 Region-enriched R2: 4.145/0.01904 |
FOXA2 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_021899 {REF} {Length: 3015} {Pfam: Forkhead domain [PF00250.20, score=129.1]} {Human: ENSG00000125798, FOXA2, forkhead box A2, [Score=224, Expect=1e-66]; ENSG00000129514, FOXA1, forkhead box A1, [Score=215, Expect=3e-63]} {Mouse: ENSMUSG00000037025, Foxa2, forkhead box A2, [Score=228, Expect=3e-68]} {Dmel: FBgn0000659, fkh, fork head, [Score=233, Expect=8e-70]} {Celegans: WBGene00004013, pha-4, Defective pharyngeal development protein 4, [Score=197, Expect=9e-58]} {Smed: dd_Smed_v6_10718_0_4, dd_Smed_v6_10718_0_4, [Score=239, Expect=1e-72]} {RNA1509_29593, RNA1509_56864} {RNA1310_6263, RNA1509_29593, RNA1509_56864} {RNA1509_29593, RNA1509_56864, RNA815_8556} Mlig455_021976 {REF} {Length: 2892} {Pfam: Forkhead domain [PF00250.20, score=129.2]} {Human: ENSG00000125798, FOXA2, forkhead box A2, [Score=222, Expect=2e-66]; ENSG00000129514, FOXA1, forkhead box A1, [Score=214, Expect=3e-63]} {Mouse: ENSMUSG00000037025, Foxa2, forkhead box A2, [Score=226, Expect=4e-68]} {Dmel: FBgn0000659, fkh, fork head, [Score=231, Expect=1e-69]} {Celegans: WBGene00004013, pha-4, Defective pharyngeal development protein 4, [Score=196, Expect=4e-57]} {Smed: dd_Smed_v6_10718_0_3, dd_Smed_v6_10718_0_3, [Score=238, Expect=1e-72]} {RNA1509_29593} {RNA1310_6263} {RNA815_8556} Mlig455_022029 {REF} {Length: 3066} {Pfam: Forkhead domain [PF00250.20, score=31.9]} {Human: ENSG00000125798, FOXA2, forkhead box A2, [Score=80.9, Expect=5e-17]; ENSG00000129514, FOXA1, forkhead box A1, [Score=80.1, Expect=7e-17]} {Mouse: ENSMUSG00000037025, Foxa2, forkhead box A2, [Score=83.6, Expect=4e-18]; ENSMUSG00000040891, Foxa3, forkhead box A3, [Score=80.1, Expect=3e-17]; ENSMUSG00000035451, Foxa1, forkhead box A1, [Score=79.7, Expect=6e-17]} {Dmel: FBgn0000659, fkh, fork head, [Score=89.0, Expect=3e-20]} {Celegans: WBGene00004013, pha-4, Defective pharyngeal development protein 4, [Score=72.8, Expect=9e-15]} {Smed: dd_Smed_v6_10718_0_3, dd_Smed_v6_10718_0_3, [Score=103, Expect=1e-25]} {RNA1509_29593} {RNA1310_6263} {RNA815_8556} |
| 7. | MligTC455_18617 | 19 | 0.4 | Mlig455_010639 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_010639 {REF} {Length: 600} {TRANSSPLICED} {Pfam: Surfeit locus protein 5 subunit 22 of Mediator complex [PF06179.14, score=24.4]} {Dmel: FBgn0040339, MED22, Mediator complex subunit 22, [Score=43.1, Expect=3e-06]} {RNA1509_27126} {RNA1310_46821} {RNA815_29735} |