Data search
Results for MligTC455_50441
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50441 | 689 | 14.36 | Mlig455_027630 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.495 Regeneration-downregulated R2: -1.945 Regeneration-depleted R2: -1.945 |
HPCA | Mlig455_027630 {REF} {Length: 1890} {Pfam: EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF00036.34, score=84.1]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF13202.8, score=62.0]; EF-hand domain pair [PF13833.8, score=39.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=38.6]} {Human: ENSG00000121905, HPCA, hippocalcin, [Score=45.4, Expect=4e-06]} {Mouse: ENSMUSG00000028785, Hpca, hippocalcin, [Score=45.4, Expect=3e-06]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=43.9, Expect=1e-05]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=64.3, Expect=1e-13]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=63.9, Expect=1e-13]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [Score=107, Expect=8e-31]} {RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386} {RNA1310_32234, RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386} {RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386, RNA815_22377.1} |
Cumulative graph for MligTC455_50441
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.357 | 4.203 | 0.00798 | 0.26737 | |
| RegionR2 | 1.416 | 4.203 | 0.00641 | 0.07557 | |
| RegionR3 | 1.26 | 4.203 | 0.00342 | 0.07392 | |
| RegionR4 | 0.037 | 4.203 | 0.93503 | 1.00000 | |
| RegionR5 | 0.362 | 4.203 | 0.40314 | 0.76081 | |
| RegionR6 | 1.022 | 4.203 | 0.02335 | 0.27717 | |
| RegionR7 | 0.071 | 4.203 | 0.89107 | 1.00000 | |
| RegionR8 | -0.811 | 4.203 | 0.24590 | 0.86321 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.562 | 4.203 | 0.29546 | 0.99297 | |
| RegenerationR2 | -1.945 | 4.203 | 0.00007 | 0.00993 | Specific for R2: -1.945 |
| RegenerationR3 | -0.843 | 4.203 | 0.08761 | 0.48047 | |
| RegenerationR4 | -0.365 | 4.203 | 0.47915 | 0.85824 | |
| RegenerationR5 | -0.032 | 4.203 | 0.94571 | 1.00000 | |
| RegenerationR6 | -0.337 | 4.203 | 0.49174 | 0.80014 | |
| RegenerationBL | -1.945 | 4.203 | 0.00613 | 0.07504 | |
| RegenerationTP | 0.718 | 4.203 | 0.21702 | 0.66004 |
Genes with expression patterns similar to MligTC455_50441
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50441 | 689 | 14.36 | Mlig455_027630 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.495 Regeneration-downregulated R2: -1.945 Regeneration-depleted R2: -1.945 |
HPCA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027630 {REF} {Length: 1890} {Pfam: EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF00036.34, score=84.1]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF13202.8, score=62.0]; EF-hand domain pair [PF13833.8, score=39.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=38.6]} {Human: ENSG00000121905, HPCA, hippocalcin, [Score=45.4, Expect=4e-06]} {Mouse: ENSMUSG00000028785, Hpca, hippocalcin, [Score=45.4, Expect=3e-06]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=43.9, Expect=1e-05]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=64.3, Expect=1e-13]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=63.9, Expect=1e-13]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [Score=107, Expect=8e-31]} {RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386} {RNA1310_32234, RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386} {RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386, RNA815_22377.1} |
| 2. | MligTC455_26047 | 280 | 5.83 | Mlig455_061668 | Neo: - Age: - |
1.663 | - | - | - | - | 0.950 | 0.713 | Mlig455_061668 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_47332} {RNA1310_41891, RNA1509_47332} {RNA1509_47332, RNA815_20265.1} | |
| 3. | MligTC455_53917 | 27 | 0.57 | Mlig455_001012 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_001012 {REF} {Length: 1524} {RNA1310_19123.2} {RNA815_14746.1} | |
| 4. | MligTC455_30153 | 63 | 1.31 | Mlig455_064467 | Neo: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_064467 {REF} {Length: 4501} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=66.2, Expect=6e-13]} {RNA1509_47056, RNA1509_59369} {RNA1310_5710.1, RNA1509_59369} {RNA1509_59369, RNA815_15609} | |
| 5. | MligTC455_52497 | 324 | 6.76 | Mlig455_013313 | Neo: - Age: - Region-enriched R5: 1.460/0.00112 |
CACFD1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_013313 {REF} {Length: 7940} {Pfam: Uncharacterized conserved protein CG6151-P [PF10233.11, score=67.5]} {Human: ENSG00000160325, CACFD1, calcium channel flower domain containing 1, [Score=57.0, Expect=9e-10]; ENSG00000280479, CACFD1, calcium channel flower domain containing 1, [Score=57.0, Expect=9e-10]} {Mouse: ENSMUSG00000015488, Cacfd1, calcium channel flower domain containing 1, [Score=55.8, Expect=6e-10]} {RNA1509_20896, RNA1509_38321, RNA1509_42052, RNA1509_55481} {RNA1310_29216, RNA1509_20896, RNA1509_38321, RNA1509_55481} {RNA1509_20896, RNA1509_38321, RNA1509_55481, RNA815_11121.1} |
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