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Results for MligTC455_54020

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_54020 578 12.05 Mlig455_011514

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.471

 Mlig455_011514 {REF} {Length: 6920} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=69.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.4]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=129, Expect=8e-33]} {RNA1509_3668} {RNA1310_1864.1} {RNA815_1730.1}

Cumulative graph for MligTC455_54020

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.291 3.779 0.81077 1.00000
RegionR2 0.216 3.779 0.66636 0.99644
RegionR3 0.258 3.779 0.51674 1.00000
RegionR4 0.096 3.779 0.84501 1.00000
RegionR5 0.25 3.779 0.49600 0.85940
RegionR6 0.062 3.779 0.88158 1.00000
RegionR7 -0.547 3.779 0.35061 0.98720
RegionR8 -0.043 3.779 0.94529 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.667 3.779 0.21878 0.95476
RegenerationR2 0.375 3.779 0.35229 0.78306
RegenerationR3 0.03 3.779 0.94827 1.00000
RegenerationR4 0.115 3.779 0.81150 0.99008
RegenerationR5 0.262 3.779 0.53785 0.87847
RegenerationR6 0.009 3.779 0.98505 1.00000
RegenerationBL 0.223 3.779 0.71350 1.00000
RegenerationTP 1.005 3.779 0.08561 0.46257


Genes with expression patterns similar to MligTC455_54020

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_54020 578 12.05 Mlig455_011514

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.471

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_011514 {REF} {Length: 6920} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=69.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.4]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=129, Expect=8e-33]} {RNA1509_3668} {RNA1310_1864.1} {RNA815_1730.1}
2. MligTC455_54021 1302 27.12 Mlig455_011593, Mlig455_050000

Neo: -

Age: -

 PUM2 5.891 0.986 0.957 0.990 0.995 0.989 0.974

Mlig455_011593 {REF} {Length: 5544} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=296.7]; CPL (NUC119) domain [PF08144.13, score=19.8]; Protein of unknown function (DUF445) [PF04286.14, score=19.7]} {Human: ENSG00000055917, PUM2, pumilio RNA binding family member 2, [RH, Score=531, Expect=5e-174]; ENSG00000134644, PUM1, pumilio RNA binding family member 1, [RH, Score=530, Expect=2e-173]} {Mouse: ENSMUSG00000020594, Pum2, pumilio RNA-binding family member 2, [RH, Score=531, Expect=1e-173]; ENSMUSG00000106966, Pum1, pumilio RNA-binding family member 1, [RH, Score=526, Expect=3e-172]; ENSMUSG00000028580, Pum1, pumilio RNA-binding family member 1, [RH, Score=526, Expect=3e-172]} {Dmel: FBgn0003165, pum, pumilio, [RH, Score=511, Expect=5e-161]} {Celegans: WBGene00004245, puf-9, PUF (Pumilio/FBF) domain-containing, [RH, Score=388, Expect=1e-122]} {Smed: dd_Smed_v6_1677_0_1, dd_Smed_v6_1677_0_1, [RH, Score=504, Expect=4e-164]} {RNA1509_24495, RNA1509_3668, RNA1509_59306} {RNA1310_1864.1, RNA1509_24495, RNA1509_59306} {RNA1509_24495, RNA1509_59306, RNA815_1730.2}

Mlig455_050000 {REF} {Length: 5309} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=296.4]; Protein of unknown function (DUF445) [PF04286.14, score=19.8]; CPL (NUC119) domain [PF08144.13, score=19.7]} {Human: ENSG00000055917, PUM2, pumilio RNA binding family member 2, [RH, Score=531, Expect=4e-173]; ENSG00000134644, PUM1, pumilio RNA binding family member 1, [RH, Score=530, Expect=3e-171]} {Mouse: ENSMUSG00000020594, Pum2, pumilio RNA-binding family member 2, [RH, Score=531, Expect=2e-173]; ENSMUSG00000028580, Pum1, pumilio RNA-binding family member 1, [RH, Score=526, Expect=5e-172]; ENSMUSG00000106966, Pum1, pumilio RNA-binding family member 1, [RH, Score=526, Expect=5e-172]} {Dmel: FBgn0003165, pum, pumilio, [RH, Score=511, Expect=5e-161]} {Celegans: WBGene00004245, puf-9, PUF (Pumilio/FBF) domain-containing, [RH, Score=388, Expect=2e-122]} {Smed: dd_Smed_v6_1677_0_1, dd_Smed_v6_1677_0_1, [RH, Score=504, Expect=3e-164]} {RNA1509_21797, RNA1509_28076, RNA1509_33435, RNA1509_3668, RNA1509_57796} {RNA1310_1864.1, RNA1509_21797, RNA1509_28076, RNA1509_33435, RNA1509_3668, RNA1509_57796} {RNA1509_21797, RNA1509_28076, RNA1509_33435, RNA1509_3668, RNA1509_57796, RNA815_1730.1}
3. MligTC455_28851 635 13.22 Mlig455_015966, Mlig455_015985, Mlig455_016082, Mlig455_041037, Mlig455_051413, Mlig455_059417

Neo: -

Age: -

 0.989 - - - - 0.989 -

Mlig455_015966 {REF} {Length: 4813} {RNA1509_34937} {RNA1310_2313.1} {RNA815_7759.1}

Mlig455_015985 {REF} {Length: 5033} {RNA1509_34937, RNA1509_37327} {RNA1310_2313.1, RNA1509_37327} {RNA1509_37327, RNA815_7759.1}

Mlig455_016082 {REF} {Length: 419} {NoTransDecoderORF} {RNA1509_34937} {RNA1310_3298} {RNA815_22311}

Mlig455_041037 {REF} {Length: 2026} {RNA1509_22642} {RNA1310_32012} {RNA815_16629}

Mlig455_051413 {REF} {Length: 3765} {RNA1509_34937, RNA1509_47681} {RNA1310_3298, RNA1509_47681} {RNA1509_47681, RNA815_7759.1}

Mlig455_059417 {REF} {Length: 3670} {RNA1509_34937} {RNA1310_2313.1} {RNA815_7759.1}
4. MligTC455_43343 2106 43.87 Mlig455_027410

Neo: -

Age: -

Regeneration-downregulated BL: -2.745

Regeneration-depleted BL: -2.745

 0.983 - - - - 0.983 - Mlig455_027410 {REF} {Length: 1151} {RNA1509_13196} {RNA1310_57327, RNA1509_13196} {RNA1509_13196, RNA815_28247}
5. MligTC455_15840 1863 38.82 Mlig455_040113, Mlig455_067337

Neo: -

Age: logFC(26M/2M)=-0.443

 RBM38 0.975 - - - 0.975 - -

Mlig455_040113 {REF} {Length: 2002} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=64.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.7]; RNA recognition motif [PF16367.7, score=21.1]} {Human: ENSG00000132819, RBM38, RNA binding motif protein 38, [RH, Score=157, Expect=1e-46]} {Mouse: ENSMUSG00000027510, Rbm38, RNA binding motif protein 38, [RH, Score=153, Expect=4e-45]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=70.1, Expect=3e-13]} {Celegans: WBGene00006321, sup-12, SUPpressor, [RH, Score=164, Expect=2e-49]} {Smed: dd_Smed_v6_11008_0_1, dd_Smed_v6_11008_0_1, [RH, Score=182, Expect=3e-56]} {RNA1509_22957, RNA1509_34069} {RNA1310_17663.1, RNA1509_34069} {RNA1509_34069, RNA815_27930}

Mlig455_067337 {REF} {Length: 3523} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=63.4]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.9]; RNA recognition motif [PF16367.7, score=20.7]} {Human: ENSG00000132819, RBM38, RNA binding motif protein 38, [RH, Score=155, Expect=7e-45]; ENSG00000112183, RBM24, RNA binding motif protein 24, [RH, Score=149, Expect=2e-42]} {Mouse: ENSMUSG00000027510, Rbm38, RNA binding motif protein 38, [RH, Score=151, Expect=2e-43]; ENSMUSG00000038132, Rbm24, RNA binding motif protein 24, [RH, Score=150, Expect=3e-43]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=69.3, Expect=1e-12]} {Celegans: WBGene00006321, sup-12, SUPpressor, [RH, Score=162, Expect=6e-48]} {Smed: dd_Smed_v6_11008_0_1, dd_Smed_v6_11008_0_1, [RH, Score=179, Expect=6e-54]} {RNA1509_22957} {RNA1310_17663.1} {RNA815_27930}
6. MligTC455_48410 155 3.23 Mlig455_001031

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_001031 {REF} {Length: 572} {NoTransDecoderORF}
7. MligTC455_51180 590 12.29 Mlig455_012498, Mlig455_012587

Neo: -

Age: -

 0.97 - - - - 0.970 -

Mlig455_012498 {REF} {Length: 3214} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=55.2]} {Smed: dd_Smed_v6_12193_0_1, dd_Smed_v6_12193_0_1, [RH, Score=58.2, Expect=1e-08]} {RNA1509_18736} {RNA1310_14745, RNA1509_18736} {RNA1509_18736, RNA815_5188}

Mlig455_012587 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=52.3]} {Smed: dd_Smed_v6_6417_0_1, dd_Smed_v6_6417_0_1, [RH, Score=52.8, Expect=4e-07]} {RNA1509_18736} {RNA1310_14745} {RNA815_5188}
8. MligTC455_16373 174 3.63 Mlig455_030616, Mlig455_031025

Neo: -

Age: -

Region-enriched R7: 3.799/0.02098

 RAPGEF2 0.959 - - - - 0.959 -

Mlig455_030616 {REF} {Length: 3142} {Pfam: RasGEF domain [PF00617.21, score=60.1]; RasGEF N-terminal motif [PF00618.22, score=30.4]; Hpt domain [PF01627.25, score=20.8]} {Human: ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [Score=126, Expect=5e-29]; ENSG00000158987, RAPGEF6, Rap guanine nucleotide exchange factor 6, [Score=121, Expect=1e-27]; ENSG00000273217, AC008695.1, novel protein, [Score=120, Expect=4e-27]} {Mouse: ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [Score=125, Expect=6e-29]; ENSMUSG00000037533, Rapgef6, Rap guanine nucleotide exchange factor (GEF) 6, [Score=120, Expect=4e-28]} {Dmel: FBgn0265778, PDZ-GEF, PDZ domain-containing guanine nucleotide exchange factor, [Score=118, Expect=8e-27]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [Score=114, Expect=9e-26]} {Smed: dd_Smed_v6_10889_0_1, dd_Smed_v6_10889_0_1, [Score=69.3, Expect=5e-12]} {RNA1310_33127.1} {RNA815_32874}

Mlig455_031025 {REF} {Length: 3182} {Pfam: RasGEF domain [PF00617.21, score=58.2]; RasGEF N-terminal motif [PF00618.22, score=30.4]} {Human: ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [Score=127, Expect=3e-29]; ENSG00000158987, RAPGEF6, Rap guanine nucleotide exchange factor 6, [Score=122, Expect=8e-28]; ENSG00000273217, AC008695.1, novel protein, [Score=121, Expect=2e-27]} {Mouse: ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [Score=126, Expect=3e-29]; ENSMUSG00000037533, Rapgef6, Rap guanine nucleotide exchange factor (GEF) 6, [Score=123, Expect=8e-29]} {Dmel: FBgn0265778, PDZ-GEF, PDZ domain-containing guanine nucleotide exchange factor, [Score=120, Expect=2e-27]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [Score=109, Expect=3e-24]} {Smed: dd_Smed_v6_4950_0_3, dd_Smed_v6_4950_0_3, [Score=72.0, Expect=1e-12]} {RNA1310_33127.1} {RNA815_32874}
9. MligTC455_29653 200 4.17 Mlig455_009145

Neo: -

Age: logFC(26M/2M)=0.607

 SETMAR 0.956 - - - - 0.956 - Mlig455_009145 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: DDE superfamily endonuclease [PF13358.8, score=32.4]; Winged helix-turn helix [PF13551.8, score=31.6]; Homeodomain-like domain [PF13384.8, score=29.0]; Bacterial regulatory proteins, lacI family [PF00356.23, score=28.5]; Helix-turn-helix domain of resolvase [PF02796.17, score=24.3]; Helix-turn-helix domain [PF13518.8, score=23.4]; Bacterial regulatory proteins, tetR family [PF00440.25, score=23.1]; Helix-turn-helix [PF01381.24, score=21.9]; Winged helix-turn-helix DNA-binding [PF13412.8, score=21.4]; MarR family [PF12802.9, score=21.3]; Sugar-specific transcriptional regulator TrmB [PF01978.21, score=21.0]; HTH DNA binding domain [PF04967.14, score=21.0]; AsnC-type helix-turn-helix domain [PF13404.8, score=20.3]; Transposase [PF01498.20, score=19.3]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_16239_0_2, dd_Smed_v6_16239_0_2, [Score=69.3, Expect=4e-14]} {RNA1509_272} {RNA1310_26410} {RNA815_12134}
10. MligTC455_40741 306 6.38 Mlig455_062243

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_062243 {REF} {Length: 1935} {RNA1509_17197, RNA1509_50186} {RNA1310_23515, RNA1509_50186} {RNA1509_50186, RNA815_9818}
11. MligTC455_08810 173 3.6 Mlig455_054289

Neo: -

Age: Up-Down-Up

 LIMK1 0.955 - - - - 0.955 - Mlig455_054289 {REF} {Length: 2786} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.3]; Protein kinase domain [PF00069.27, score=130.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.1]} {Human: ENSG00000106683, LIMK1, LIM domain kinase 1, [Score=175, Expect=9e-49]} {Mouse: ENSMUSG00000029674, Limk1, LIM-domain containing, protein kinase, [Score=172, Expect=4e-48]} {Dmel: FBgn0283712, LIMK1, LIM domain kinase 1, [Score=163, Expect=3e-44]} {Celegans: WBGene00003030, lin-45, Raf homolog serine/threonine-protein kinase, [Score=105, Expect=1e-24]} {Smed: dd_Smed_v6_4373_0_1, dd_Smed_v6_4373_0_1, [Score=117, Expect=2e-29]} {RNA1509_32349} {RNA1310_20379.1, RNA1509_32349} {RNA1509_32349, RNA815_32665}
12. MligTC455_08811 162 3.38 Mlig455_054365

Neo: -

Age: Down-Down-Down

 0.955 - - - - 0.955 - Mlig455_054365 {REF} {Length: 881} {RNA1509_52541} {RNA1310_78287} {RNA815_41027}
13. MligTC455_06814 49 1.02 Mlig455_046899

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_046899 {REF} {Length: 337}
14. MligTC455_34253 1073 22.35 Mlig455_035968

Neo: -

Age: -

Region-enriched R5: 1.204/0.04277

 PGK1 0.953 - - - - 0.953 - Mlig455_035968 {REF} {Length: 2381} {Pfam: Phosphoglycerate kinase [PF00162.21, score=488.1]} {Human: ENSG00000102144, PGK1, phosphoglycerate kinase 1, [RH, Score=588, Expect=0.0]; ENSG00000170950, PGK2, phosphoglycerate kinase 2, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000062070, Pgk1, phosphoglycerate kinase 1, [RH, Score=587, Expect=0.0]; ENSMUSG00000031233, Pgk2, phosphoglycerate kinase 2, [RH, Score=572, Expect=0.0]} {Dmel: FBgn0250906, Pgk, Phosphoglycerate kinase, [RH, Score=562, Expect=0.0]} {Celegans: WBGene00020185, pgk-1, Probable phosphoglycerate kinase, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_972_0_1, dd_Smed_v6_972_0_1, [RH, Score=602, Expect=0.0]} {RNA1509_1929, RNA1509_24971} {RNA1310_10765.1, RNA1509_1929, RNA1509_24971} {RNA1509_1929, RNA1509_24971, RNA815_5032.1}
15. MligTC455_21238 129 2.69 Mlig455_005974

Neo: -

Age: -

Region-enriched R5: 1.628/0.01619

 0.952 - - - - 0.952 - Mlig455_005974 {REF} {Length: 382} {NoTransDecoderORF} {RNA1509_57525} {RNA1310_118595} {RNA815_10590.1}
16. MligTC455_14695 21 0.43 Mlig455_028114

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_028114 {REF} {Length: 488} {NoTransDecoderORF}
17. MligTC455_17738 600 12.49 Mlig455_005267

Neo: -

Age: Up-Down-Up

 PKNOX2 0.95 - - - - 0.950 - Mlig455_005267 {REF} {Length: 4191} {Pfam: Homeobox KN domain [PF05920.13, score=68.1]; N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=55.5]; Homeodomain [PF00046.31, score=30.5]} {Human: ENSG00000165495, PKNOX2, PBX/knotted 1 homeobox 2, [RH, Score=209, Expect=1e-59]} {Mouse: ENSMUSG00000035934, Pknox2, Pbx/knotted 1 homeobox 2, [RH, Score=209, Expect=2e-59]} {Dmel: FBgn0001235, hth, homothorax, [Score=117, Expect=1e-27]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=107, Expect=3e-24]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=258, Expect=2e-75]} {RNA1509_58890} {RNA1310_1426.1} {RNA815_7214}

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