TomoSeq data search

Data search

Results for MligTC455_54045

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_54045	1333	27.77	Mlig455_045113	Neo: - Age: Down-Up-Up	CNP	Mlig455_045113 {REF} {Length: 2530} {TRANSSPLICED} {Pfam: 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) [PF05881.14, score=81.3]} {Human: ENSG00000173786, CNP, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=87.0, Expect=5e-19]} {Mouse: ENSMUSG00000006782, Cnp, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=86.3, Expect=9e-19]} {Smed: dd_Smed_v6_2431_0_1, dd_Smed_v6_2431_0_1, [Score=66.2, Expect=3e-12]} {RNA1509_28788, RNA1509_8015} {RNA1310_22119, RNA1509_28788, RNA1509_8015} {RNA1509_28788, RNA1509_8015, RNA815_29195}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_54045

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.833	4.942	0.44361	1.00000
RegionR2	-0.078	4.942	0.87796	1.00000
RegionR3	0.143	4.942	0.72598	1.00000
RegionR4	0.185	4.942	0.69536	0.98568
RegionR5	-0.406	4.942	0.32063	0.66254
RegionR6	0.372	4.942	0.36665	0.94759
RegionR7	0.686	4.942	0.13965	0.69930
RegionR8	-0.07	4.942	0.91610	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.562	4.942	0.20379	0.94442
RegenerationR2	0.153	4.942	0.74230	0.97069
RegenerationR3	0.481	4.942	0.32412	0.75149
RegenerationR4	0.623	4.942	0.21131	0.65875
RegenerationR5	0.356	4.942	0.45138	0.83129
RegenerationR6	0.62	4.942	0.19598	0.53563
RegenerationBL	0.189	4.942	0.69996	1.00000
RegenerationTP	-0.79	4.942	0.19066	0.62953

Genes with expression patterns similar to MligTC455_54045

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_54045	1333	27.77	Mlig455_045113	Neo: - Age: Down-Up-Up	CNP	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_045113 {REF} {Length: 2530} {TRANSSPLICED} {Pfam: 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) [PF05881.14, score=81.3]} {Human: ENSG00000173786, CNP, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=87.0, Expect=5e-19]} {Mouse: ENSMUSG00000006782, Cnp, 2',3'-cyclic nucleotide 3' phosphodiesterase, [Score=86.3, Expect=9e-19]} {Smed: dd_Smed_v6_2431_0_1, dd_Smed_v6_2431_0_1, [Score=66.2, Expect=3e-12]} {RNA1509_28788, RNA1509_8015} {RNA1310_22119, RNA1509_28788, RNA1509_8015} {RNA1509_28788, RNA1509_8015, RNA815_29195}
2.	MligTC455_04645	3218	67.03	Mlig455_070885	Neo: - Age: logFC(26M/2M)=0.309 Region-enriched R3: 1.082/0.00299	CMBL	1.788	-	-	-	0.950	0.838	-	Mlig455_070885 {REF} {Length: 1230} {Pfam: Dienelactone hydrolase family [PF01738.20, score=58.5]; alpha/beta hydrolase fold [PF00561.22, score=18.7]} {Human: ENSG00000164237, CMBL, carboxymethylenebutenolidase homolog, [RH, Score=74.7, Expect=2e-15]} {Mouse: ENSMUSG00000022235, Cmbl, carboxymethylenebutenolidase-like (Pseudomonas), [RH, Score=79.0, Expect=4e-17]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [Score=130, Expect=7e-37]} {RNA1509_4080} {RNA1310_26918, RNA1509_4080} {RNA1509_4080, RNA815_11993}
3.	MligTC455_29123	2292	47.76	Mlig455_020178	Neo: - Age: logFC(26M/2M)=0.207	MCCC1	0.958	-	-	-	0.958	-	-	Mlig455_020178 {REF} {Length: 2323} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=244.9]; Biotin carboxylase, N-terminal domain [PF00289.24, score=153.6]; Biotin carboxylase C-terminal domain [PF02785.21, score=119.0]; Biotin-requiring enzyme [PF00364.24, score=57.3]; D-ala D-ala ligase C-terminus [PF07478.15, score=39.6]; ATP-grasp domain [PF02222.24, score=33.5]; Biotin-lipoyl like [PF13533.8, score=28.4]; Sugar-transfer associated ATP-grasp [PF14397.8, score=23.0]; HlyD family secretion protein [PF13437.8, score=22.9]; RimK-like ATP-grasp domain [PF08443.13, score=21.6]; Barrel-sandwich domain of CusB or HlyD membrane-fusion [PF16576.7, score=20.2]} {Human: ENSG00000078070, MCCC1, methylcrotonoyl-CoA carboxylase 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000027709, Mccc1, methylcrotonoyl-Coenzyme A carboxylase 1 (alpha), [RH, Score=689, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [RH, Score=676, Expect=0.0]} {Celegans: WBGene00009319, mccc-1, MethylCrotonoyl-Coenzyme A Carboxylase (Alpha), [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_6992_0_1, dd_Smed_v6_6992_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_13082, RNA1509_5404, RNA1509_56793} {RNA1310_8804, RNA1509_13082, RNA1509_5404, RNA1509_56793} {RNA1509_13082, RNA1509_5404, RNA1509_56793, RNA815_19432}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_54045

1333

27.77

Mlig455_045113

Neo: -

Age: Down-Up-Up

CNP

1.000

MligTC455_04645

3218

67.03

Mlig455_070885

Neo: -

Age: logFC(26M/2M)=0.309

Region-enriched R3: 1.082/0.00299

CMBL

1.788

0.950

0.838

Mlig455_070885 {REF} {Length: 1230} {Pfam: Dienelactone hydrolase family [PF01738.20, score=58.5]; alpha/beta hydrolase fold [PF00561.22, score=18.7]} {Human: ENSG00000164237, CMBL, carboxymethylenebutenolidase homolog, [RH, Score=74.7, Expect=2e-15]} {Mouse: ENSMUSG00000022235, Cmbl, carboxymethylenebutenolidase-like (Pseudomonas), [RH, Score=79.0, Expect=4e-17]} {Smed: dd_Smed_v6_2062_0_1, dd_Smed_v6_2062_0_1, [Score=130, Expect=7e-37]} {RNA1509_4080} {RNA1310_26918, RNA1509_4080} {RNA1509_4080, RNA815_11993}

MligTC455_29123

2292

47.76

Mlig455_020178

Neo: -

Age: logFC(26M/2M)=0.207

MCCC1

0.958

Mlig455_020178 {REF} {Length: 2323} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=244.9]; Biotin carboxylase, N-terminal domain [PF00289.24, score=153.6]; Biotin carboxylase C-terminal domain [PF02785.21, score=119.0]; Biotin-requiring enzyme [PF00364.24, score=57.3]; D-ala D-ala ligase C-terminus [PF07478.15, score=39.6]; ATP-grasp domain [PF02222.24, score=33.5]; Biotin-lipoyl like [PF13533.8, score=28.4]; Sugar-transfer associated ATP-grasp [PF14397.8, score=23.0]; HlyD family secretion protein [PF13437.8, score=22.9]; RimK-like ATP-grasp domain [PF08443.13, score=21.6]; Barrel-sandwich domain of CusB or HlyD membrane-fusion [PF16576.7, score=20.2]} {Human: ENSG00000078070, MCCC1, methylcrotonoyl-CoA carboxylase 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000027709, Mccc1, methylcrotonoyl-Coenzyme A carboxylase 1 (alpha), [RH, Score=689, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [RH, Score=676, Expect=0.0]} {Celegans: WBGene00009319, mccc-1, MethylCrotonoyl-Coenzyme A Carboxylase (Alpha), [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_6992_0_1, dd_Smed_v6_6992_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_13082, RNA1509_5404, RNA1509_56793} {RNA1310_8804, RNA1509_13082, RNA1509_5404, RNA1509_56793} {RNA1509_13082, RNA1509_5404, RNA1509_56793, RNA815_19432}