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Results for MligTC455_54293

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_54293 358 7.46 Mlig455_017929

Neo: -

Age: -

 Mlig455_017929 {REF} {Length: 671} {NoTransDecoderORF} {RNA1509_24544, RNA1509_24991} {RNA1310_16285.1, RNA1509_24991} {RNA1509_24991, RNA815_22613}

Cumulative graph for MligTC455_54293

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.165 3.292 0.11715 0.70522
RegionR2 0.461 3.292 0.62803 0.96932
RegionR3 0.727 3.292 0.41958 0.94359
RegionR4 1.364 3.292 0.13998 0.38203
RegionR5 0.453 3.292 0.61659 0.97291
RegionR6 0.861 3.292 0.32857 0.91679
RegionR7 1.38 3.292 0.12826 0.67397
RegionR8 0.92 3.292 0.44769 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.893 3.292 0.99995 1.00000
RegenerationR2 -0.586 3.292 0.26897 0.71472
RegenerationR3 -0.765 3.292 0.18640 0.62265
RegenerationR4 -0.641 3.292 0.28790 0.73251
RegenerationR5 -0.079 3.292 0.89316 1.00000
RegenerationR6 -0.696 3.292 0.23923 0.58674
RegenerationBL 0.084 3.292 0.89602 1.00000
RegenerationTP -0.312 3.292 0.67005 1.00000


Genes with expression patterns similar to MligTC455_54293

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_54293 358 7.46 Mlig455_017929

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_017929 {REF} {Length: 671} {NoTransDecoderORF} {RNA1509_24544, RNA1509_24991} {RNA1310_16285.1, RNA1509_24991} {RNA1509_24991, RNA815_22613}
2. MligTC455_25792 1420 29.58 Mlig455_016342, Mlig455_020876, Mlig455_036482, Mlig455_060659, Mlig455_068395

Neo: -

Age: -

Region-enriched R7: 1.712/0.01745

 1.711 - - - 0.955 0.756 -

Mlig455_016342 {REF} {Length: 850} {RNA1509_22707} {RNA1310_33596.1} {RNA815_24119.1}

Mlig455_020876 {REF} {Length: 1066} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1}

Mlig455_036482 {REF} {Length: 786} {RNA1509_22707} {RNA1310_15800} {RNA815_24119.1}

Mlig455_060659 {REF} {Length: 1236} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1}

Mlig455_068395 {REF} {Length: 354} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_90313} {RNA815_24119.1}
3. MligTC455_18067 944 19.67 Mlig455_070113

Neo: -

Age: -

 DDX5 0.966 - - - - 0.966 - Mlig455_070113 {REF} {Length: 2860} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=167.3]; Helicase conserved C-terminal domain [PF00271.33, score=100.8]; ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=19.1]} {Human: ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=545, Expect=0.0]; ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=535, Expect=0.0]} {Mouse: ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=545, Expect=0.0]; ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=536, Expect=0.0]} {Dmel: FBgn0035720, CG10077, [RH, Score=510, Expect=3e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=473, Expect=3e-160]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=519, Expect=9e-178]} {RNA1509_13183, RNA1509_824} {RNA1310_2431, RNA1509_13183} {RNA1509_13183, RNA815_7183}
4. MligTC455_46258 612 12.74 Mlig455_000592, Mlig455_069015

Neo: -

Age: -

Region-enriched R5: 2.081/0.00360

 0.965 - - - 0.965 - -

Mlig455_000592 {REF} {Length: 2003} {TRANSSPLICED} {Pfam: Jumping translocation breakpoint protein (JTB) [PF05439.14, score=29.8]} {Smed: dd_Smed_v6_8352_0_1, dd_Smed_v6_8352_0_1, [RH, Score=50.8, Expect=2e-08]} {RNA1509_33082, RNA1509_49082} {RNA1310_34573.1, RNA1509_49082} {RNA1509_49082, RNA815_15763.1}

Mlig455_069015 {REF} {Length: 2002} {TRANSSPLICED} {Pfam: Jumping translocation breakpoint protein (JTB) [PF05439.14, score=29.9]} {Smed: dd_Smed_v6_8352_0_1, dd_Smed_v6_8352_0_1, [RH, Score=50.8, Expect=3e-08]} {RNA1509_33082} {RNA1310_34573.1} {RNA815_15763.1}
5. MligTC455_42622 818 17.05 Mlig455_002600

Neo: Int S/G2/M

Age: Down-Up-Down

Regeneration-upregulated BL: 1.616

Regeneration-enriched BL: 1.616

 RBM17 0.962 - - - - 0.962 - Mlig455_002600 {REF} {Length: 1563} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=48.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=31.0]} {Human: ENSG00000134453, RBM17, RNA binding motif protein 17, [RH, Score=199, Expect=4e-59]} {Mouse: ENSMUSG00000037197, Rbm17, RNA binding motif protein 17, [RH, Score=197, Expect=7e-59]} {Dmel: FBgn0086683, Spf45, [RH, Score=160, Expect=5e-45]} {Celegans: WBGene00010233, F58B3.7, [RH, Score=119, Expect=4e-30]} {Smed: dd_Smed_v6_4530_0_1, dd_Smed_v6_4530_0_1, [RH, Score=234, Expect=5e-74]} {RNA1509_10111} {RNA1310_21374, RNA1509_10111} {RNA1509_10111, RNA815_7888}
6. MligTC455_41312 916 19.09 Mlig455_013368

Neo: Irradiation

Age: -

Region-enriched R4: 3.067/0.00000

 CFL2 0.955 - - - 0.955 - - Mlig455_013368 {REF} {Length: 1349} {TRANSSPLICED} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=119.0]} {Human: ENSG00000165410, CFL2, cofilin 2, [RH, Score=85.1, Expect=3e-21]; ENSG00000172757, CFL1, cofilin 1, [RH, Score=84.3, Expect=7e-21]; ENSG00000125868, DSTN, destrin, actin depolymerizing factor, [RH, Score=82.4, Expect=4e-20]} {Mouse: ENSMUSG00000062929, Cfl2, cofilin 2, muscle, [RH, Score=85.1, Expect=2e-21]; ENSMUSG00000056201, Cfl1, cofilin 1, non-muscle, [RH, Score=83.6, Expect=7e-21]} {Celegans: WBGene00006794, unc-60, Actin-depolymerizing factor 2, isoform c, [RH, Score=74.7, Expect=1e-17]} {Smed: dd_Smed_v6_260_0_1, dd_Smed_v6_260_0_1, [Score=94.0, Expect=1e-25]} {RNA1509_16555, RNA1509_9929} {RNA1310_23323.1, RNA1509_16555, RNA1509_9929} {RNA1509_16555, RNA1509_9929, RNA815_9903}
7. MligTC455_24638 10038 209.12 Mlig455_065643

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.449

 TMED9 0.952 - - - 0.952 - - Mlig455_065643 {REF} {Length: 1570} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=186.2]} {Human: ENSG00000184840, TMED9, transmembrane p24 trafficking protein 9, [RH, Score=304, Expect=3e-105]; ENSG00000158604, TMED4, transmembrane p24 trafficking protein 4, [RH, Score=303, Expect=5e-105]} {Mouse: ENSMUSG00000004394, Tmed4, transmembrane p24 trafficking protein 4, [RH, Score=303, Expect=2e-105]; ENSMUSG00000058569, Tmed9, transmembrane p24 trafficking protein 9, [RH, Score=298, Expect=4e-103]} {Dmel: FBgn0069242, eca, eclair, [RH, Score=306, Expect=1e-106]} {Celegans: WBGene00013360, Y60A3A.9, [RH, Score=281, Expect=4e-97]} {Smed: dd_Smed_v6_1023_0_1, dd_Smed_v6_1023_0_1, [RH, Score=305, Expect=1e-106]} {RNA1509_947} {RNA1310_22464} {RNA815_9086}
8. MligTC455_24637 9911 206.49 Mlig455_010316

Neo: -

Age: -

 TMED9 0.95 - - - 0.950 - - Mlig455_010316 {REF} {Length: 1902} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=186.3]} {Human: ENSG00000184840, TMED9, transmembrane p24 trafficking protein 9, [RH, Score=305, Expect=2e-105]; ENSG00000158604, TMED4, transmembrane p24 trafficking protein 4, [RH, Score=304, Expect=2e-105]} {Mouse: ENSMUSG00000004394, Tmed4, transmembrane p24 trafficking protein 4, [RH, Score=304, Expect=1e-105]; ENSMUSG00000058569, Tmed9, transmembrane p24 trafficking protein 9, [RH, Score=299, Expect=2e-103]} {Dmel: FBgn0069242, eca, eclair, [RH, Score=306, Expect=9e-107]} {Celegans: WBGene00013360, Y60A3A.9, [RH, Score=281, Expect=4e-97]} {Smed: dd_Smed_v6_1023_0_1, dd_Smed_v6_1023_0_1, [RH, Score=306, Expect=1e-106]} {RNA1509_13833, RNA1509_1976, RNA1509_9342, RNA1509_947} {RNA1310_22464, RNA1509_13833, RNA1509_1976, RNA1509_9342, RNA1509_947} {RNA1509_13833, RNA1509_1976, RNA1509_9342, RNA1509_947, RNA815_9086}
9. MligTC455_30460 237 4.93 Mlig455_016316

Neo: -

Age: logFC(26M/2M)=0.327

 SYNPO2 0.95 - - - 0.950 - - Mlig455_016316 {REF} {Length: 8662} {Pfam: PDZ domain [PF00595.26, score=40.1]; PDZ domain [PF17820.3, score=28.4]} {Human: ENSG00000172403, SYNPO2, synaptopodin 2, [RH, Score=65.5, Expect=7e-12]} {Mouse: ENSMUSG00000050315, Synpo2, synaptopodin 2, [RH, Score=67.8, Expect=9e-11]} {Dmel: FBgn0039897, CG1674, [RH, Score=58.2, Expect=5e-08]} {Smed: dd_Smed_v6_11887_0_1, dd_Smed_v6_11887_0_1, [RH, Score=135, Expect=6e-34]} {RNA1509_55508} {RNA1310_19597} {RNA815_19378}

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