Data search
Results for MligTC455_57177
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_57177 | 11 | 0.24 | Mlig455_001352 | Neo: - Age: - |
Mlig455_001352 {REF} {Length: 533} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=23.3]} {RNA1310_41519} |
Cumulative graph for MligTC455_57177
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_57177
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_57177 | 11 | 0.24 | Mlig455_001352 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_001352 {REF} {Length: 533} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=23.3]} {RNA1310_41519} | |
| 2. | MligTC455_35747 | 14 | 0.3 | Mlig455_044386 | Neo: - Age: Down-Up-Down |
HTR3A | 0.984 | - | - | - | - | 0.984 | - | Mlig455_044386 {REF} {Length: 1966} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=73.0]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=37.0]} {Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=94.7, Expect=1e-20]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=94.4, Expect=1e-20]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=90.1, Expect=2e-19]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=95.1, Expect=4e-21]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=94.4, Expect=6e-21]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=105, Expect=1e-24]} {Celegans: WBGene00001133, eat-2, Neuronal acetylcholine receptor subunit eat-2, [Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [Score=98.2, Expect=2e-22]} {RNA1310_56011} {RNA815_22778} |
| 3. | MligTC455_34010 | 204 | 4.26 | Mlig455_024028, Mlig455_024093 | Neo: - Age: Up-Down-Down |
KCNC1 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_024028 {REF} {Length: 3896} {Pfam: Ion transport protein [PF00520.33, score=148.2]; BTB/POZ domain [PF02214.24, score=101.1]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=1e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=5e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=408, Expect=1e-132]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00004793, shw-3, SHaW family of potassium channels; Voltage-gated K+ channel isoform 1, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=689, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.2} {RNA815_13734} Mlig455_024093 {REF} {Length: 3992} {Pfam: Ion transport protein [PF00520.33, score=148.2]; BTB/POZ domain [PF02214.24, score=101.1]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=1e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=5e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=408, Expect=1e-132]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00004793, shw-3, SHaW family of potassium channels; Voltage-gated K+ channel isoform 1, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=689, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.2} {RNA815_13734} |
| 4. | MligTC455_42087 | 129 | 2.68 | Mlig455_028171 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_028171 {REF} {Length: 2511} {RNA1509_40406} {RNA1310_12938} {RNA815_16887} | |
| 5. | MligTC455_32644 | 41 | 0.86 | Mlig455_043770, Mlig455_043786 | Neo: - Age: - Region-enriched R2: 6.705/0.00336 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_043770 {REF} {Length: 1011} {Pfam: PAN domain [PF00024.28, score=19.3]} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=60.8, Expect=3e-11]} {RNA1509_35604} {RNA1310_57814} {RNA815_29718} Mlig455_043786 {REF} {Length: 1348} {Pfam: PAN domain [PF00024.28, score=19.3]} {RNA1509_35604} {RNA1310_34182} {RNA815_29718} |
|
| 6. | MligTC455_39296 | 144 | 2.99 | Mlig455_011714, Mlig455_026830, Mlig455_038021, Mlig455_057425 | Neo: Germline Age: Up-Down-Down Region-enriched R2: 4.786/0.04939 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_011714 {REF} {Length: 3110} {Pfam: Transposase protein [PF12017.10, score=74.1]; THAP domain [PF05485.14, score=36.7]} {RNA1509_56557} {RNA1310_11302, RNA1509_56557} {RNA1509_56557, RNA815_17021} Mlig455_026830 {REF} {Length: 1916} {Pfam: Transposase protein [PF12017.10, score=43.7]} {RNA1509_56557} {RNA1310_48290} {RNA815_17021} Mlig455_038021 {REF} {Length: 3107} {Pfam: Transposase protein [PF12017.10, score=73.7]; THAP domain [PF05485.14, score=35.9]} {RNA1509_56557} {RNA1310_11302} {RNA815_17021} Mlig455_057425 {REF} {Length: 3527} {Pfam: Transposase protein [PF12017.10, score=66.6]; THAP domain [PF05485.14, score=35.4]} {RNA1509_56557} {RNA1310_11302} {RNA815_17021} |
|
| 7. | MligTC455_47395 | 71 | 1.48 | Mlig455_052211 | Neo: - Age: - |
CHRNA10 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_052211 {REF} {Length: 3367} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=210.9]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=144.4]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=125, Expect=9e-30]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=125, Expect=6e-30]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=120, Expect=4e-28]} {Dmel: FBgn0015519, nAChRalpha3, nicotinic Acetylcholine Receptor alpha3, [Score=111, Expect=9e-25]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=135, Expect=2e-33]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=123, Expect=3e-29]} {RNA1509_30974} {RNA1310_28768.1} {RNA815_26436} |
| 8. | MligTC455_41035 | 366 | 7.62 | Mlig455_000866 | Neo: - Age: logFC(26M/2M)=-0.773 Region-specific R2: 5.029 Region-enriched R2: 4.768/0.00000 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_000866 {REF} {Length: 1126} {Pfam: Pancreatic hormone peptide [PF00159.20, score=41.6]} {RNA1509_27581} {RNA1310_74103, RNA1509_27581} {RNA1509_27581, RNA815_38377} | |
| 9. | MligTC455_48571 | 99 | 2.06 | Mlig455_068334 | Neo: - Age: - Region-enriched R2: 3.861/0.00695 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_068334 {REF} {Length: 319} {RNA1509_42654} {RNA1310_10680} {RNA815_32705} | |
| 10. | MligTC455_16749 | 454 | 9.45 | Mlig455_001550, Mlig455_046548 | Neo: - Age: logFC(26M/2M)=0.515 Region-specific R2: 4.360 Region-enriched R2: 3.409/0.00015 |
TRAF4 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_001550 {REF} {Length: 4563} {Pfam: TRAF-type zinc finger [PF02176.20, score=81.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.3]; Seven in absentia protein family [PF03145.18, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.4]; zf-RING of BARD1-type protein [PF14835.8, score=20.3]; Ring finger domain [PF13639.8, score=19.5]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=237, Expect=4e-72]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=241, Expect=7e-74]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=164, Expect=1e-44]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=276, Expect=1e-87]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_20900} {RNA1310_14813, RNA1509_20900} {RNA1509_20900, RNA815_2335.1} Mlig455_046548 {REF} {Length: 3881} {Pfam: TRAF-type zinc finger [PF02176.20, score=81.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.3]; Seven in absentia protein family [PF03145.18, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.4]; zf-RING of BARD1-type protein [PF14835.8, score=20.3]; Ring finger domain [PF13639.8, score=19.5]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=236, Expect=1e-71]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=240, Expect=3e-73]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=164, Expect=9e-45]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=275, Expect=6e-87]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_20900} {RNA1310_14813} {RNA815_2335.1} |
| 11. | MligTC455_53637 | 3377 | 70.36 | Mlig455_026738, Mlig455_051749 | Neo: - Age: Down-Down-Up Region-enriched R8: 2.667/0.00000 Regeneration-downregulated BL: -2.506 Regeneration-depleted BL: -2.506 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_026738 {REF} {Length: 1503} {RNA1509_14499} {RNA1310_49321, RNA1509_14499} {RNA1509_14499, RNA815_24877} Mlig455_051749 {REF} {Length: 639} {RNA1509_14499} {RNA1310_49321} {RNA815_24877} |
|
| 12. | MligTC455_25670 | 56 | 1.17 | Mlig455_002942 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.002 Region-enriched R3: 3.168/0.04222 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_002942 {REF} {Length: 2524} {RNA1509_57755} {RNA1310_35856.1} {RNA815_19086} | |
| 13. | MligTC455_45999 | 128 | 2.67 | Mlig455_045216 | Neo: - Age: Down-Down-Up Region-enriched R2: 4.224/0.01692 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_045216 {REF} {Length: 1119} {RNA1509_35312} {RNA1310_137994} {RNA815_42624} | |
| 14. | MligTC455_09706 | 30 | 0.62 | Mlig455_015819 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_015819 {REF} {Length: 776} {NoTransDecoderORF} {RNA1509_15725} {RNA1310_15694.2} {RNA815_48933} | |
| 15. | MligTC455_18500 | 1471 | 30.65 | Mlig455_031869 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.532 Region-enriched R2: 1.314/0.00526 Regeneration-downregulated BL: -2.252 Regeneration-depleted BL: -2.252 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_031869 {REF} {Length: 3516} {RNA1509_12038, RNA1509_15832, RNA1509_26696, RNA1509_30104, RNA1509_49054} {RNA1310_23818, RNA1509_12038, RNA1509_15832, RNA1509_26696, RNA1509_30104, RNA1509_49054} {RNA1509_12038, RNA1509_15832, RNA1509_26696, RNA1509_30104, RNA1509_49054, RNA815_15169} | |
| 16. | MligTC455_35960 | 7399 | 154.16 | Mlig455_026549, Mlig455_026639 | Neo: - Age: - Region-enriched R2: 2.367/0.00000 Regeneration-downregulated BL: -2.261 Regeneration-depleted BL: -2.261 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_026549 {REF} {Length: 2670} {TRANSSPLICED} {RNA1509_22112, RNA1509_28335, RNA1509_42847} {RNA1310_15566.1, RNA1509_22112, RNA1509_28335, RNA1509_42847} {RNA1509_22112, RNA1509_28335, RNA1509_42847, RNA815_4401.1} Mlig455_026639 {REF} {Length: 1560} {TRANSSPLICED} {RNA1509_13099, RNA1509_22074} {RNA1310_15566.1, RNA1509_13099, RNA1509_22074} {RNA1509_13099, RNA1509_22074, RNA815_4401.1} |
|
| 17. | MligTC455_45918 | 280 | 5.83 | Mlig455_040163 | Neo: - Age: Up-Down-Up Region-enriched R8: 3.045/0.00855 |
PLSCR1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_040163 {REF} {Length: 4635} {Pfam: Scramblase [PF03803.17, score=246.2]; Zinc-finger double domain [PF13465.8, score=22.5]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=244, Expect=2e-73]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=238, Expect=4e-71]; ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [Score=237, Expect=6e-71]} {Dmel: FBgn0052056, scramb1, scramblase 1, [RH, Score=248, Expect=8e-74]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=197, Expect=4e-57]} {Smed: dd_Smed_v6_16813_0_1, dd_Smed_v6_16813_0_1, [RH, Score=307, Expect=2e-97]} {RNA1509_29261} {RNA1310_13155} {RNA815_8732} |
| 18. | MligTC455_18300 | 66 | 1.39 | Mlig455_023416, Mlig455_023444 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.480 Region-enriched R2: 5.316/0.00583 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_023416 {REF} {Length: 1159} {RNA1310_76698} {RNA815_41333} Mlig455_023444 {REF} {Length: 1183} {RNA1310_76698} {RNA815_41333} |