Data search
Results for MligTC455_01353
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_01353 | 12 | 0.26 | Mlig455_011739 | Neo: - Age: - |
Mlig455_011739 {REF} {Length: 852} {Pfam: Integrase core domain [PF00665.28, score=28.0]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=1e-11]} {RNA1509_14877} {RNA1310_28454.1} {RNA815_5959.1} |
Cumulative graph for MligTC455_01353
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_01353
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_01353 | 12 | 0.26 | Mlig455_011739 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_011739 {REF} {Length: 852} {Pfam: Integrase core domain [PF00665.28, score=28.0]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=1e-11]} {RNA1509_14877} {RNA1310_28454.1} {RNA815_5959.1} | |
| 2. | MligTC455_07174 | 94 | 1.96 | Mlig455_007312 | Neo: - Age: Up-Down-Down |
0.975 | - | - | - | - | 0.975 | - | Mlig455_007312 {REF} {Length: 240} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56237} {RNA1310_59534.2} {RNA815_29807} | |
| 3. | MligTC455_32973 | 42 | 0.88 | Mlig455_048857 | Neo: - Age: - |
KCTD1 | 0.975 | - | - | - | - | 0.975 | - | Mlig455_048857 {REF} {Length: 2446} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=41.7]; Phage integrase family [PF00589.24, score=30.2]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=98.2, Expect=3e-21]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=98.2, Expect=2e-21]} {RNA1509_32880} {RNA1310_39104} {RNA815_16657.2} |
| 4. | MligTC455_16097 | 136 | 2.83 | Mlig455_014805 | Neo: - Age: - Regeneration-upregulated BL: 4.102 Regeneration-enriched BL: 4.102 |
0.971 | - | - | - | - | 0.971 | - | Mlig455_014805 {REF} {Length: 1202} {RNA1509_24228} {RNA1310_15368.2} | |
| 5. | MligTC455_35051 | 220 | 4.58 | Mlig455_020175 | Neo: - Age: Down-Up-Down Region-enriched R8: 5.304/0.00000 |
CALM3 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_020175 {REF} {Length: 927} {Pfam: EF hand [PF00036.34, score=111.3]; EF-hand domain pair [PF13499.8, score=98.6]; EF-hand domain [PF13405.8, score=91.1]; EF-hand domain pair [PF13833.8, score=78.1]; EF hand [PF13202.8, score=76.7]; EF-hand domain [PF14658.8, score=56.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=26.7]; Dockerin type I domain [PF00404.20, score=22.0]; EF-hand domain [PF17959.3, score=21.1]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=146, Expect=5e-45]; ENSG00000198668, CALM1, calmodulin 1, [Score=146, Expect=5e-45]; ENSG00000143933, CALM2, calmodulin 2, [Score=146, Expect=5e-45]; ENSG00000178363, CALML3, calmodulin like 3, [Score=143, Expect=8e-44]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=146, Expect=3e-45]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=146, Expect=3e-45]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=146, Expect=3e-45]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=144, Expect=4e-44]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=148, Expect=8e-46]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=147, Expect=7e-46]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=147, Expect=5e-46]} {RNA1310_46966} {RNA815_26674} |
| 6. | MligTC455_51970 | 10 | 0.21 | Mlig455_058942 | Neo: - Age: Up-Down-Down |
0.959 | - | - | - | - | 0.959 | - | Mlig455_058942 {REF} {Length: 2794} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_33135} {RNA815_39433} | |
| 7. | MligTC455_39606 | 760 | 15.83 | Mlig455_041071, Mlig455_041073, Mlig455_064712 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.586 Region-enriched R7: 2.475/0.00685 |
AL035078.4, CALU, RCN1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_041071 {REF} {Length: 756} {Human: ENSG00000285283, AL035078.4, novel protein, [Score=45.8, Expect=1e-05]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=46.6, Expect=5e-06]} {Celegans: WBGene00015646, mlt-10, [Score=66.2, Expect=7e-13]} {RNA1509_42339} {RNA1310_2126} {RNA815_1130} Mlig455_041073 {REF} {Length: 854} {Pfam: EF-hand domain pair [PF13499.8, score=20.9]; EF-hand domain [PF13405.8, score=18.8]; EF hand [PF00036.34, score=18.3]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [Score=56.2, Expect=1e-09]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=52.4, Expect=1e-08]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=57.0, Expect=3e-10]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=53.1, Expect=5e-09]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=49.7, Expect=5e-08]} {RNA1509_42339} {RNA1310_28039.1} {RNA815_39026} Mlig455_064712 {REF} {Length: 2449} {Pfam: EF hand [PF00036.34, score=58.7]; EF-hand domain pair [PF13499.8, score=58.2]; EF-hand domain [PF13405.8, score=50.6]; EF hand [PF13202.8, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=20.8]; EF-hand domain pair [PF13833.8, score=19.4]} {Human: ENSG00000128595, CALU, calumenin, [Score=85.9, Expect=1e-17]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [Score=84.7, Expect=1e-17]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=84.7, Expect=1e-17]} {Celegans: WBGene00015646, mlt-10, [Score=177, Expect=1e-47]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=109, Expect=3e-26]} {RNA1509_42339} {RNA1310_28039.1} {RNA815_39026} |
| 8. | MligTC455_12741 | 31 | 0.65 | Mlig455_068263 | Neo: - Age: - |
TMEM26 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_068263 {REF} {Length: 2059} {Pfam: Transmembrane protein 26 [PF09772.11, score=224.2]} {Human: ENSG00000196932, TMEM26, transmembrane protein 26, [Score=126, Expect=2e-32]} {Mouse: ENSMUSG00000060044, Tmem26, transmembrane protein 26, [Score=133, Expect=3e-35]} {Dmel: FBgn0039429, CG14238, [Score=179, Expect=2e-51]} {Celegans: WBGene00022469, Y119C1B.3, [Score=136, Expect=5e-36]} {Smed: dd_Smed_v6_16130_0_1, dd_Smed_v6_16130_0_1, [Score=139, Expect=2e-37]} {RNA1310_26669} {RNA815_22828} |
| 9. | MligTC455_39921 | 16 | 0.34 | Mlig455_011423 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_011423 {REF} {Length: 868} {NoTransDecoderORF} {RNA1509_46569} {RNA1310_25987} {RNA815_7475.2} |
Berezikov Lab - 2020-2021 © ERIBA