Data search
Results for MligTC455_16097
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16097 | 136 | 2.83 | Mlig455_014805 | Neo: - Age: - Regeneration-upregulated BL: 4.102 Regeneration-enriched BL: 4.102 |
Mlig455_014805 {REF} {Length: 1202} {RNA1509_24228} {RNA1310_15368.2} |
Cumulative graph for MligTC455_16097
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.944 | 2.228 | 0.99980 | 1.00000 | |
| RegionR2 | 0.809 | 2.228 | 0.49821 | 0.87814 | |
| RegionR3 | 0.455 | 2.228 | 0.61492 | 1.00000 | |
| RegionR4 | 2.177 | 2.228 | 0.10485 | 0.31759 | |
| RegionR5 | 1.047 | 2.228 | 0.33888 | 0.68569 | |
| RegionR6 | 0.988 | 2.228 | 0.38625 | 0.96321 | |
| RegionR7 | 0.202 | 2.228 | 0.73661 | 1.00000 | |
| RegionR8 | -3.735 | 2.228 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.896 | 2.228 | 0.99989 | 1.00000 | |
| RegenerationR2 | -0.176 | 2.228 | 0.78109 | 0.98356 | |
| RegenerationR3 | 0.485 | 2.228 | 0.56978 | 0.89381 | |
| RegenerationR4 | -0.212 | 2.228 | 0.79888 | 0.98590 | |
| RegenerationR5 | 0.14 | 2.228 | 0.85227 | 1.00000 | |
| RegenerationR6 | 0.183 | 2.228 | 0.83001 | 0.99064 | |
| RegenerationBL | 4.102 | 2.228 | 0.00018 | 0.00691 | Specific for BL: 4.102 |
| RegenerationTP | 1.108 | 2.228 | 0.59205 | 0.95596 |
Genes with expression patterns similar to MligTC455_16097
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16097 | 136 | 2.83 | Mlig455_014805 | Neo: - Age: - Regeneration-upregulated BL: 4.102 Regeneration-enriched BL: 4.102 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_014805 {REF} {Length: 1202} {RNA1509_24228} {RNA1310_15368.2} | |
| 2. | MligTC455_16832 | 193 | 4.01 | Mlig455_050408 | Neo: - Age: - Region-enriched R4: 2.401/0.03173 |
1.815 | - | - | - | - | 0.959 | 0.856 | Mlig455_050408 {REF} {Length: 2464} {RNA1509_56144} {RNA1310_28893.1} {RNA815_39130} | |
| 3. | MligTC455_19138 | 92 | 1.91 | Mlig455_028338 | Neo: - Age: - |
CCDC103 | 0.972 | - | - | - | 0.972 | - | - | Mlig455_028338 {REF} {Length: 1607} {TRANSSPLICED} {Pfam: Dynein attachment factor N-terminus [PF15867.7, score=94.3]; Potential Monad-binding region of RPAP3 [PF13877.8, score=59.1]} {Human: ENSG00000167131, CCDC103, coiled-coil domain containing 103, [RH, Score=105, Expect=5e-27]; ENSG00000214447, FAM187A, family with sequence similarity 187 member A, [RH, Score=105, Expect=6e-27]} {Mouse: ENSMUSG00000020930, Ccdc103, coiled-coil domain containing 103, [RH, Score=111, Expect=1e-29]} {Dmel: FBgn0033623, CG13202, [RH, Score=46.6, Expect=6e-07]} {Smed: dd_Smed_v6_14131_0_1, dd_Smed_v6_14131_0_1, [RH, Score=87.8, Expect=5e-21]} {RNA1509_44514} {RNA1310_34867.1} {RNA815_14846} |
| 4. | MligTC455_01353 | 12 | 0.26 | Mlig455_011739 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_011739 {REF} {Length: 852} {Pfam: Integrase core domain [PF00665.28, score=28.0]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=1e-11]} {RNA1509_14877} {RNA1310_28454.1} {RNA815_5959.1} | |
| 5. | MligTC455_49325 | 97 | 2.03 | Mlig455_003430 | Neo: - Age: - |
OXR1 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_003430 {REF} {Length: 2734} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.3} {Pfam: TLD [PF07534.18, score=65.1]; LysM domain [PF01476.22, score=24.1]} {Human: ENSG00000164830, OXR1, oxidation resistance 1, [Score=82.0, Expect=1e-17]} {Mouse: ENSMUSG00000022307, Oxr1, oxidation resistance 1, [Score=80.5, Expect=3e-17]; ENSMUSG00000074628, Tldc2, TBC/LysM associated domain containing 2, [Score=77.4, Expect=3e-16]} {Dmel: FBgn0013576, mtd, mustard, [Score=84.7, Expect=3e-19]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [Score=77.8, Expect=1e-15]} {Smed: dd_Smed_v6_5399_0_1, dd_Smed_v6_5399_0_1, [Score=78.2, Expect=9e-16]} {RNA1509_26806} {RNA1310_21194, RNA1509_26806} {RNA1509_26806, RNA815_10860} |
| 6. | MligTC455_18493 | 152 | 3.17 | Mlig455_045534 | Neo: - Age: Down-Up-Down |
0.965 | - | - | - | - | 0.965 | - | Mlig455_045534 {REF} {Length: 2309} {TRANSSPLICED} {RNA1509_22048} {RNA1310_10576.1} {RNA815_5393} | |
| 7. | MligTC455_49782 | 116 | 2.41 | Mlig455_055413 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.547 Regeneration-upregulated BL: 5.364 Regeneration-enriched BL: 5.364 |
TAX1BP3 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_055413 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=31.8]; PDZ domain [PF17820.3, score=25.7]; PDZ domain [PF13180.8, score=22.4]} {Human: ENSG00000213977, TAX1BP3, Tax1 binding protein 3, [Score=56.6, Expect=1e-10]} {Mouse: ENSMUSG00000040158, Tax1bp3, Tax1 (human T cell leukemia virus type I) binding protein 3, [Score=56.6, Expect=6e-11]} {Dmel: FBgn0035148, CG3402, [Score=72.0, Expect=5e-17]} {Celegans: WBGene00016678, C45G9.7, [Score=77.8, Expect=2e-19]} {RNA1509_46994} {RNA1310_49427.1} {RNA815_26268.2} |
| 8. | MligTC455_41583 | 264 | 5.5 | Mlig455_029161 | Neo: - Age: Down-Down-Down Region-enriched R4: 2.539/0.00741 Regeneration-upregulated BL: 2.950 Regeneration-enriched BL: 2.950 |
0.957 | - | - | - | - | 0.957 | - | Mlig455_029161 {REF} {Length: 3133} {TRANSSPLICED} {RNA1509_59069} {RNA1310_32555, RNA1509_59069} {RNA1509_59069, RNA815_10517} | |
| 9. | MligTC455_24087 | 548 | 11.41 | Mlig455_017476 | Neo: - Age: - |
CBSL | 0.956 | - | - | - | 0.956 | - | - | Mlig455_017476 {REF} {Length: 2130} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=219.8]; CBS domain [PF00571.30, score=48.5]} {Human: ENSG00000274276, CBSL, cystathionine-beta-synthase like, [RH, Score=619, Expect=0.0]; ENSG00000160200, CBS, cystathionine-beta-synthase, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [RH, Score=622, Expect=0.0]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [RH, Score=452, Expect=9e-155]} {Celegans: WBGene00013866, cbs-1, Cystathionine Beta-Synthase, [RH, Score=370, Expect=9e-121]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [RH, Score=659, Expect=0.0]} {RNA1509_32341} {RNA1310_10466.1} {RNA815_2644.1} |
| 10. | MligTC455_51660 | 72 | 1.51 | Mlig455_017813, Mlig455_058033 | Neo: - Age: - |
QRFPR | 0.956 | - | - | - | - | 0.956 | - | Mlig455_017813 {REF} {Length: 3692} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=159.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.0]; Olfactory receptor [PF13853.8, score=24.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.6]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=127, Expect=6e-32]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=125, Expect=2e-31]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=127, Expect=9e-32]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=105, Expect=2e-24]} {Smed: dd_Smed_v6_22653_0_1, dd_Smed_v6_22653_0_1, [RH, Score=236, Expect=2e-73]} {RNA1310_63091} {RNA815_54301} Mlig455_058033 {REF} {Length: 3887} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=159.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.0]; Olfactory receptor [PF13853.8, score=24.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.6]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=127, Expect=6e-32]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=125, Expect=2e-31]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=127, Expect=9e-32]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=105, Expect=2e-24]} {Smed: dd_Smed_v6_22653_0_1, dd_Smed_v6_22653_0_1, [RH, Score=236, Expect=2e-73]} {RNA1310_63091} {RNA815_52759} |
| 11. | MligTC455_19046 | 505 | 10.52 | Mlig455_051093 | Neo: Irradiation Age: - |
GSK3B | 0.955 | - | - | - | - | 0.955 | - | Mlig455_051093 {REF} {Length: 2924} {Pfam: Protein kinase domain [PF00069.27, score=225.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.9]; Kinase-like [PF14531.8, score=23.3]; ABC1 atypical kinase-like domain [PF03109.18, score=21.3]; Phosphotransferase enzyme family [PF01636.25, score=18.9]} {Human: ENSG00000082701, GSK3B, glycogen synthase kinase 3 beta, [Score=549, Expect=0.0]; ENSG00000105723, GSK3A, glycogen synthase kinase 3 alpha, [Score=539, Expect=0.0]} {Mouse: ENSMUSG00000022812, Gsk3b, glycogen synthase kinase 3 beta, [Score=548, Expect=0.0]; ENSMUSG00000057177, Gsk3a, glycogen synthase kinase 3 alpha, [Score=523, Expect=0.0]} {Dmel: FBgn0003371, sgg, shaggy, [Score=527, Expect=0.0]} {Celegans: WBGene00001746, gsk-3, Glycogen synthase kinase-3, [RH, Score=483, Expect=2e-171]} {Smed: dd_Smed_v6_4762_0_1, dd_Smed_v6_4762_0_1, [Score=548, Expect=0.0]} {RNA1509_18324, RNA1509_6602} {RNA1310_7142, RNA1509_18324, RNA1509_6602} {RNA1509_18324, RNA1509_6602, RNA815_3836} |
| 12. | MligTC455_41584 | 267 | 5.57 | Mlig455_029189 | Neo: - Age: - Region-enriched R4: 2.456/0.01143 Regeneration-upregulated BL: 2.790 Regeneration-enriched BL: 2.790 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_029189 {REF} {Length: 1125} {RNA1509_59069} {RNA1310_56599.1} {RNA815_31355} | |
| 13. | MligTC455_07755 | 197 | 4.11 | Mlig455_038727 | Neo: - |
ANKRD6 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_038727 {REF} {Length: 5506} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=158.2]; Ankyrin repeats (many copies) [PF13637.8, score=101.5]; Ankyrin repeat [PF00023.32, score=100.3]; Ankyrin repeats (many copies) [PF13857.8, score=93.9]; Ankyrin repeat [PF13606.8, score=92.0]} {Human: ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=171, Expect=2e-44]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=178, Expect=5e-47]} {Dmel: FBgn0086898, dgo, diego, [Score=160, Expect=2e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_10764_0_3, dd_Smed_v6_10764_0_3, [Score=222, Expect=3e-63]} {RNA1509_29314} {RNA1310_7295} {RNA815_14899} |
| 14. | MligTC455_49159 | 267 | 5.57 | Mlig455_062353, Mlig455_062366 | Neo: - Age: - Region-enriched R4: 3.582/0.01652 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_062353 {REF} {Length: 739} {RNA1509_34245} {RNA1310_30049} {RNA815_18326} Mlig455_062366 {REF} {Length: 807} {RNA1509_34245} {RNA1310_30049} {RNA815_18326} |
|
| 15. | MligTC455_37128 | 155 | 3.22 | Mlig455_066474, Mlig455_066476 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_066474 {REF} {Length: 669} {Celegans: WBGene00022511, ZC53.4, [Score=68.6, Expect=3e-15]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=55.8, Expect=8e-11]} {RNA1509_53241} {RNA1310_47825} {RNA815_1671.1} Mlig455_066476 {REF} {Length: 7427} {Pfam: Coilin N-terminus [PF15862.7, score=22.6]} {RNA1509_23774} {RNA1310_17710.2} {RNA815_1857} |
|
| 16. | MligTC455_33486 | 297 | 6.18 | Mlig455_048747 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.583 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_048747 {REF} {Length: 1479} {TRANSSPLICED} {Smed: dd_Smed_v6_4347_0_1, dd_Smed_v6_4347_0_1, [RH, Score=53.1, Expect=2e-09]} {RNA1509_37074} {RNA1310_22957} {RNA815_949} |
Berezikov Lab - 2020-2021 © ERIBA