TomoSeq data search

Data search

Results for MligTC455_02593

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_02593	58	1.21	Mlig455_067504	Neo: - Age: logFC(26M/2M)=-0.359	MX2	Mlig455_067504 {REF} {Length: 3763} {Pfam: Dynamin central region [PF01031.22, score=149.9]; Dynamin family [PF00350.25, score=124.7]; Dynamin GTPase effector domain [PF02212.20, score=53.5]; 50S ribosome-binding GTPase [PF01926.25, score=23.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.7]; AAA ATPase domain [PF13175.8, score=22.5]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [RH, Score=347, Expect=1e-107]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [RH, Score=333, Expect=1e-102]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [RH, Score=339, Expect=2e-105]} {Dmel: FBgn0003392, shi, shibire, [Score=154, Expect=3e-38]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=166, Expect=3e-42]} {Smed: dd_Smed_v6_6863_0_4, dd_Smed_v6_6863_0_4, [Score=164, Expect=7e-42]} {RNA1509_52436} {RNA1310_1482.1} {RNA815_3194}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_02593

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.243	1.4	0.08097	0.62149
RegionR2	3.415	1.4	0.02372	0.17120
RegionR3	0.637	1.4	0.58857	1.00000
RegionR4	-2.731	1.4	1.00000	1.00000
RegionR5	-0.239	1.4	0.93215	1.00000
RegionR6	-0.296	1.4	0.94078	1.00000
RegionR7	2.847	1.4	0.03482	0.35534
RegionR8	3.61	1.4	0.02285	0.29451

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.242	1.4	1.00000	1.00000
RegenerationR2	1.855	1.4	0.08616	0.47216
RegenerationR3	2.935	1.4	0.02339	0.27591
RegenerationR4	3.233	1.4	0.02034	0.22580
RegenerationR5	2.278	1.4	0.05190	0.36681
RegenerationR6	3.642	1.4	0.01336	0.14246
RegenerationBL	-1.969	1.4	0.48640	0.85153
RegenerationTP	-0.174	1.4	0.98989	1.00000

Genes with expression patterns similar to MligTC455_02593

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_02593	58	1.21	Mlig455_067504	Neo: - Age: logFC(26M/2M)=-0.359	MX2	3	-	1.000	-	-	1.000	1.000	Mlig455_067504 {REF} {Length: 3763} {Pfam: Dynamin central region [PF01031.22, score=149.9]; Dynamin family [PF00350.25, score=124.7]; Dynamin GTPase effector domain [PF02212.20, score=53.5]; 50S ribosome-binding GTPase [PF01926.25, score=23.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.7]; AAA ATPase domain [PF13175.8, score=22.5]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [RH, Score=347, Expect=1e-107]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [RH, Score=333, Expect=1e-102]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [RH, Score=339, Expect=2e-105]} {Dmel: FBgn0003392, shi, shibire, [Score=154, Expect=3e-38]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=166, Expect=3e-42]} {Smed: dd_Smed_v6_6863_0_4, dd_Smed_v6_6863_0_4, [Score=164, Expect=7e-42]} {RNA1509_52436} {RNA1310_1482.1} {RNA815_3194}
2.	MligTC455_51455	235	4.9	Mlig455_020896	Neo: - Age: - Region-enriched R2: 2.815/0.01995	INTS9	0.98	-	-	-	-	0.980	-	Mlig455_020896 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=46.8]; Beta-Casp domain [PF10996.10, score=24.8]} {Human: ENSG00000104299, INTS9, integrator complex subunit 9, [RH, Score=350, Expect=6e-111]} {Mouse: ENSMUSG00000021975, Ints9, integrator complex subunit 9, [RH, Score=341, Expect=2e-107]} {Dmel: FBgn0036570, IntS9, Integrator 9, [RH, Score=308, Expect=2e-95]} {Celegans: WBGene00017608, F19F10.12, [RH, Score=206, Expect=9e-58]} {Smed: dd_Smed_v6_5262_0_1, dd_Smed_v6_5262_0_1, [RH, Score=317, Expect=5e-99]} {RNA1509_13901} {RNA1310_11245.1} {RNA815_21239}
3.	MligTC455_30826	98	2.04	Mlig455_047664	Neo: - Age: -		0.977	-	-	-	-	-	0.977	Mlig455_047664 {REF} {Length: 879} {NoTransDecoderORF} {RNA1310_39208} {RNA815_16462}
4.	MligTC455_25045	124	2.59	Mlig455_039949	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.594		0.972	-	-	-	-	-	0.972	Mlig455_039949 {REF} {Length: 1468} {RNA1509_60123} {RNA1310_39749.1} {RNA815_21596}
5.	MligTC455_31128	677	14.09	Mlig455_014434, Mlig455_014442	Neo: - Age: Down-Down-Up	LIG4	0.972	-	-	-	-	0.972	-	Mlig455_014434 {REF} {Length: 3798} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.6]; RNA ligase [PF09414.12, score=29.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=252, Expect=3e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=133, Expect=8e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459} Mlig455_014442 {REF} {Length: 3787} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.7]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]; RNA ligase [PF09414.12, score=27.4]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=649, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=641, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=253, Expect=2e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=134, Expect=5e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=570, Expect=0.0]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459}
6.	MligTC455_41357	94	1.95	Mlig455_011498	Neo: - Age: - Region-enriched R5: 4.393/0.03983		0.969	-	-	-	-	-	0.969	Mlig455_011498 {REF} {Length: 1119} {NoTransDecoderORF} {RNA1310_47564}
7.	MligTC455_11137	65	1.36	Mlig455_007742	Neo: - Age: -	FAT1	0.967	-	-	-	-	-	0.967	Mlig455_007742 {REF} {Length: 4301} {Pfam: Cadherin domain [PF00028.19, score=102.1]; EGF-like domain [PF00008.29, score=51.2]; Calcium-binding EGF domain [PF07645.17, score=33.3]} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=207, Expect=2e-53]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=212, Expect=5e-55]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=210, Expect=2e-54]} {Dmel: FBgn0261574, kug, kugelei, [Score=155, Expect=9e-38]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=121, Expect=2e-27]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=161, Expect=1e-39]} {RNA1509_55673} {RNA1310_45646} {RNA815_38697}
8.	MligTC455_48199	16	0.33	Mlig455_069827	Neo: - Age: Down-Up-Up	YPEL1	0.965	-	-	-	-	-	0.965	Mlig455_069827 {REF} {Length: 539} {TRANSSPLICED} {Pfam: Yippee zinc-binding/DNA-binding /Mis18, centromere assembly [PF03226.16, score=55.8]} {Human: ENSG00000100027, YPEL1, yippee like 1, [RH, Score=188, Expect=1e-62]; ENSG00000175155, YPEL2, yippee like 2, [RH, Score=188, Expect=8e-63]; ENSG00000090238, YPEL3, yippee like 3, [RH, Score=184, Expect=4e-61]} {Mouse: ENSMUSG00000018427, Ypel2, yippee like 2, [RH, Score=188, Expect=5e-63]; ENSMUSG00000022773, Ypel1, yippee like 1, [RH, Score=186, Expect=3e-62]; ENSMUSG00000042675, Ypel3, yippee like 3, [RH, Score=184, Expect=3e-61]} {Dmel: FBgn0030183, CG15309, [RH, Score=182, Expect=8e-61]} {Celegans: WBGene00009503, F37A8.5, Protein yippee-like F37A8.5, [RH, Score=185, Expect=9e-62]} {Smed: dd_Smed_v6_5855_0_1, dd_Smed_v6_5855_0_1, [RH, Score=177, Expect=4e-58]} {RNA1509_7200} {RNA1310_44257} {RNA815_7621}
9.	MligTC455_14210	108	2.25	Mlig455_060739	Neo: Int S/G2/M Age: Down-Up-Down		0.962	-	-	-	-	-	0.962	Mlig455_060739 {REF} {Length: 1276} {RNA1509_42122} {RNA1310_19443} {RNA815_21271}
10.	MligTC455_34880	36	0.75	Mlig455_017973	Neo: - Age: Up-Down-Down		0.961	-	-	-	-	-	0.961	Mlig455_017973 {REF} {Length: 5669} {Dmel: FBgn0024189, sns, sticks and stones, [Score=54.7, Expect=7e-07]} {RNA1509_31973} {RNA1310_19096.1} {RNA815_39446}
11.	MligTC455_26505	27	0.57	Mlig455_065894	Neo: Neoblast Age: -		0.959	-	-	-	-	-	0.959	Mlig455_065894 {REF} {Length: 2349} {RNA1509_1271} {RNA1310_39996.1} {RNA815_9166}
12.	MligTC455_38700	38	0.8	Mlig455_038044	Neo: - Age: Down-Up-Down	REL	0.956	-	-	-	-	-	0.956	Mlig455_038044 {REF} {Length: 1617} {TRANSSPLICED} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=64.3]} {Human: ENSG00000162924, REL, REL proto-oncogene, NF-kB subunit, [RH, Score=59.7, Expect=3e-09]} {RNA1509_17115, RNA1509_26802, RNA1509_39065, RNA1509_56952} {RNA1310_28549.1, RNA1509_17115, RNA1509_26802, RNA1509_39065, RNA1509_56952} {RNA1509_17115, RNA1509_26802, RNA1509_39065, RNA1509_56952, RNA815_8836.1}
13.	MligTC455_46101	10	0.2	Mlig455_011282	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_011282 {REF} {Length: 2523} {NoTransDecoderORF} {RNA1509_48039} {RNA1310_88733} {RNA815_22354}
14.	MligTC455_28400	91	1.9	Mlig455_023643	Neo: - Age: Down-Up-Down		0.952	-	-	-	-	-	0.952	Mlig455_023643 {REF} {Length: 1957} {TRANSSPLICED} {Pfam: Ctr copper transporter family [PF04145.17, score=30.8]} {Dmel: FBgn0062413, Ctr1A, Copper transporter 1A, [Score=45.4, Expect=5e-06]} {RNA1509_2913} {RNA1310_42494} {RNA815_39416}
15.	MligTC455_50059	565	11.77	Mlig455_040293	Neo: - Age: - Region-enriched R5: 1.943/0.00926	LATS1	0.952	-	-	-	-	0.952	-	Mlig455_040293 {REF} {Length: 3580} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=104.0]; ABC1 atypical kinase-like domain [PF03109.18, score=23.2]; Protein kinase C terminal domain [PF00433.26, score=19.7]} {Human: ENSG00000131023, LATS1, large tumor suppressor kinase 1, [RH, Score=530, Expect=1e-173]} {Mouse: ENSMUSG00000040021, Lats1, large tumor suppressor, [RH, Score=532, Expect=2e-174]; ENSMUSG00000116422, Lats1, large tumor suppressor, [RH, Score=532, Expect=2e-174]} {Dmel: FBgn0011739, wts, warts, [RH, Score=492, Expect=2e-159]} {Celegans: WBGene00007047, wts-1, Serine/threonine-protein kinase WARTS homolog, [RH, Score=387, Expect=1e-121]} {Smed: dd_Smed_v6_6231_0_1, dd_Smed_v6_6231_0_1, [RH, Score=518, Expect=9e-173]} {RNA1509_21245, RNA1509_6235} {RNA1310_3266.2, RNA1509_21245, RNA1509_6235} {RNA1509_21245, RNA1509_6235, RNA815_2862}
16.	MligTC455_14218	37	0.77	Mlig455_029441, Mlig455_029460	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_029441 {REF} {Length: 2810} {RNA1310_70183} Mlig455_029460 {REF} {Length: 1628} {RNA1310_70183}
17.	MligTC455_14518	53	1.1	Mlig455_053561	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.743		0.951	-	-	-	-	-	0.951	Mlig455_053561 {REF} {Length: 2497} {RNA1509_31793, RNA1509_8694} {RNA1310_1310, RNA1509_31793} {RNA1509_31793, RNA815_49150}
18.	MligTC455_44067	62	1.29	Mlig455_022545, Mlig455_022585	Neo: - Age: -	THRA, THRB	0.951	-	-	-	-	-	0.951	Mlig455_022545 {REF} {Length: 4795} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=105.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=64.8]} {Human: ENSG00000126351, THRA, thyroid hormone receptor alpha, [Score=169, Expect=2e-44]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=172, Expect=1e-45]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [RH, Score=175, Expect=5e-45]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [Score=108, Expect=7e-25]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=200, Expect=6e-54]} {RNA1509_27629} {RNA1310_74061} {RNA815_54074} Mlig455_022585 {REF} {Length: 3179} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=68.1]} {Human: ENSG00000151090, THRB, thyroid hormone receptor beta, [Score=120, Expect=1e-30]; ENSG00000126351, THRA, thyroid hormone receptor alpha, [Score=120, Expect=6e-31]; ENSG00000131759, RARA, retinoic acid receptor alpha, [Score=114, Expect=6e-29]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=120, Expect=4e-31]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=120, Expect=1e-30]} {Dmel: FBgn0004865, Eip78C, Ecdysone-induced protein 78C, [Score=62.4, Expect=9e-11]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=86.3, Expect=8e-19]} {RNA1310_74061} {RNA815_54074}
19.	MligTC455_13112	113	2.35	Mlig455_060121	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_060121 {REF} {Length: 309} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_134109}
20.	MligTC455_51562	331	6.9	Mlig455_031005	Neo: Irradiation Age: -	RMI1	0.95	-	-	-	-	0.950	-	Mlig455_031005 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: RecQ mediated genome instability protein [PF08585.14, score=132.5]; Recq-mediated genome instability protein 1, C-terminal OB-fold [PF16099.7, score=41.0]} {Human: ENSG00000178966, RMI1, RecQ mediated genome instability 1, [RH, Score=120, Expect=1e-28]} {Mouse: ENSMUSG00000035367, Rmi1, RecQ mediated genome instability 1, [RH, Score=115, Expect=4e-26]} {Celegans: WBGene00011576, rmh-2, RMi1 (RMI1) Homolog, [Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_15427_0_1, dd_Smed_v6_15427_0_1, [RH, Score=97.1, Expect=7e-21]} {RNA1509_19306} {RNA1310_8212.2} {RNA815_20681}