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Results for MligTC455_03405

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_03405 22 0.46 Mlig455_055645

Neo: -

Age: -

Region-enriched R4: 3.600/0.04744

 Mlig455_055645 {REF} {Length: 458} {RNA1509_12042} {RNA1310_1137.2} {RNA815_55711}

Cumulative graph for MligTC455_03405

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 7.129 0.76 0.00632 0.24701
RegionR2 -2.458 0.76 0.99971 1.00000
RegionR3 -1.964 0.76 0.99978 1.00000
RegionR4 3.6 0.76 0.00712 0.04744
RegionR5 -1.946 0.76 0.99973 1.00000
RegionR6 -2.346 0.76 0.99977 1.00000
RegionR7 -1.343 0.76 0.99981 1.00000
RegionR8 -0.672 0.76 0.99975 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.199 0.76 0.10953 0.83372
RegenerationR2 2.555 0.76 0.10301 0.50646
RegenerationR3 -1.39 0.76 0.99987 1.00000
RegenerationR4 -3.029 0.76 0.03210 0.28964
RegenerationR5 1.232 0.76 0.27306 0.70411
RegenerationR6 0.076 0.76 0.67221 0.90968
RegenerationBL 3.445 0.76 0.12366 0.41779
RegenerationTP -1.118 0.76 0.99994 1.00000


Genes with expression patterns similar to MligTC455_03405

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_03405 22 0.46 Mlig455_055645

Neo: -

Age: -

Region-enriched R4: 3.600/0.04744

 1 - - - - 1.000 - Mlig455_055645 {REF} {Length: 458} {RNA1509_12042} {RNA1310_1137.2} {RNA815_55711}
2. MligTC455_13795 10 0.22 Mlig455_049344

Neo: -

Age: -

 0.99 - - - - 0.990 - Mlig455_049344 {REF} {Length: 485} {NoTransDecoderORF} {RNA1310_71916}
3. MligTC455_43789 48 0.99 Mlig455_029925

Neo: -

Age: -

 FARP1 0.982 - - - - 0.982 - Mlig455_029925 {REF} {Length: 2354} {Pfam: PH domain [PF00169.31, score=54.9]; RhoGEF domain [PF00621.22, score=25.8]} {Human: ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [Score=151, Expect=7e-38]; ENSMUSG00000025555, Farp1, FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived), [Score=149, Expect=3e-37]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=118, Expect=2e-27]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=91.7, Expect=3e-19]} {Smed: dd_Smed_v6_14700_0_1, dd_Smed_v6_14700_0_1, [Score=154, Expect=2e-39]} {RNA1509_30091} {RNA1310_43814.1} {RNA815_20350}
4. MligTC455_47943 83 1.73 Mlig455_018165, Mlig455_069944

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.888

 0.981 - - - - 0.981 -

Mlig455_018165 {REF} {Length: 2120} {RNA1509_50096} {RNA1310_19543, RNA1509_50096} {RNA1509_50096, RNA815_21860}

Mlig455_069944 {REF} {Length: 2117} {RNA1509_50096} {RNA1310_19543} {RNA815_21860}
5. MligTC455_29808 204 4.26 Mlig455_056288

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.556/0.04090

 MCM3AP 0.976 - - - - 0.976 - Mlig455_056288 {REF} {Length: 6365} {Pfam: SAC3/GANP family [PF03399.18, score=315.0]} {Human: ENSG00000160294, MCM3AP, minichromosome maintenance complex component 3 associated protein, [RH, Score=330, Expect=2e-91]} {Mouse: ENSMUSG00000001150, Mcm3ap, minichromosome maintenance complex component 3 associated protein, [RH, Score=328, Expect=7e-91]} {Dmel: FBgn0028974, xmas-2, [RH, Score=289, Expect=3e-79]} {Celegans: WBGene00017642, F20D12.2, [RH, Score=210, Expect=7e-55]} {Smed: dd_Smed_v6_10065_0_1, dd_Smed_v6_10065_0_1, [RH, Score=273, Expect=3e-75]} {RNA1509_12513} {RNA1310_1606} {RNA815_453.1}
6. MligTC455_31615 336 7 Mlig455_042153, Mlig455_065866

Neo: -

Age: -

 USP5 0.975 - - - - 0.975 -

Mlig455_042153 {REF} {Length: 1274} {TRANSSPLICED} {Pfam: Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=61.6]} {Human: ENSG00000111667, USP5, ubiquitin specific peptidase 5, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000038429, Usp5, ubiquitin specific peptidase 5 (isopeptidase T), [Score=209, Expect=4e-64]} {Dmel: FBgn0035402, Usp5, Ubiquitin specific protease 5, [Score=200, Expect=6e-61]} {Celegans: WBGene00020839, usp-5, Ubiquitinyl hydrolase 1, [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_3655_0_1, dd_Smed_v6_3655_0_1, [Score=185, Expect=2e-58]} {RNA1509_20040} {RNA1310_16514.1} {RNA815_39489}

Mlig455_065866 {REF} {Length: 2979} {TRANSSPLICED} {Pfam: Squalene/phytoene synthase [PF00494.21, score=103.7]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=58.7]} {Human: ENSG00000111667, USP5, ubiquitin specific peptidase 5, [Score=208, Expect=9e-59]} {Mouse: ENSMUSG00000038429, Usp5, ubiquitin specific peptidase 5 (isopeptidase T), [Score=207, Expect=2e-58]} {Dmel: FBgn0035402, Usp5, Ubiquitin specific protease 5, [Score=199, Expect=1e-55]} {Celegans: WBGene00020839, usp-5, Ubiquitinyl hydrolase 1, [Score=122, Expect=2e-29]} {Smed: dd_Smed_v6_3655_0_1, dd_Smed_v6_3655_0_1, [Score=182, Expect=6e-53]} {RNA1509_48859} {RNA1310_18155} {RNA815_13377}
7. MligTC455_08352 14 0.29 Mlig455_017214

Neo: Irradiation

Age: Down-Down-Up

 APEX1 0.971 - - - - 0.971 - Mlig455_017214 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=69.4]; Endonuclease-reverse transcriptase [PF14529.8, score=24.9]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=305, Expect=2e-100]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=310, Expect=1e-102]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=302, Expect=3e-95]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=238, Expect=3e-75]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=338, Expect=8e-114]} {RNA1509_16413} {RNA1310_25554} {RNA815_11218.1}
8. MligTC455_41803 24 0.5 Mlig455_001656

Neo: -

Age: -

 TBL1XR1 0.971 - - - - 0.971 - Mlig455_001656 {REF} {Length: 1963} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=159.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=105.4]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=40.8]; Coatomer WD associated region [PF04053.16, score=26.2]; LisH [PF08513.13, score=24.5]} {Human: ENSG00000177565, TBL1XR1, transducin beta like 1 X-linked receptor 1, [RH, Score=689, Expect=0.0]; ENSG00000101849, TBL1X, transducin beta like 1 X-linked, [RH, Score=684, Expect=0.0]; ENSG00000092377, TBL1Y, transducin beta like 1 Y-linked, [RH, Score=677, Expect=0.0]} {Mouse: ENSMUSG00000027630, Tbl1xr1, transducin (beta)-like 1X-linked receptor 1, [RH, Score=694, Expect=0.0]; ENSMUSG00000025246, Tbl1x, transducin (beta)-like 1 X-linked, [RH, Score=684, Expect=0.0]} {Dmel: FBgn0263933, ebi, [RH, Score=573, Expect=0.0]} {Celegans: WBGene00021074, W07E6.2, [Score=110, Expect=7e-26]} {Smed: dd_Smed_v6_3247_0_1, dd_Smed_v6_3247_0_1, [RH, Score=519, Expect=2e-180]} {RNA1509_57475} {RNA1310_6496.1, RNA1509_57475} {RNA1509_57475, RNA815_1670}
9. MligTC455_32932 26 0.54 Mlig455_031885

Neo: -

Age: Up-Down-Up

 BEST4 0.967 - - - - 0.967 - Mlig455_031885 {REF} {Length: 2058} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=43.1]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=67.0, Expect=5e-12]; ENSG00000039987, BEST2, bestrophin 2, [Score=66.2, Expect=1e-11]; ENSG00000167995, BEST1, bestrophin 1, [Score=64.7, Expect=2e-11]} {Mouse: ENSMUSG00000052819, Best2, bestrophin 2, [Score=68.6, Expect=1e-12]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=90.5, Expect=3e-20]} {Celegans: WBGene00014989, best-23, Bestrophin homolog, [Score=70.9, Expect=9e-14]} {Smed: dd_Smed_v6_50289_0_1, dd_Smed_v6_50289_0_1, [Score=94.0, Expect=2e-23]} {RNA1509_22118} {RNA1310_38526} {RNA815_2846.1}
10. MligTC455_23638 20 0.41 Mlig455_025868, Mlig455_025928, Mlig455_025959

Neo: -

Age: Up-Down-Down

 0.966 - - - - 0.966 -

Mlig455_025868 {REF} {Length: 1158} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=55.1]} {RNA1310_78629}

Mlig455_025928 {REF} {Length: 3552} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=130.7]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=67.8, Expect=9e-12]} {RNA1310_55747}

Mlig455_025959 {REF} {Length: 1931} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=129.3]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=68.9, Expect=4e-12]} {RNA1310_55747}
11. MligTC455_21228 91 1.89 Mlig455_010973

Neo: -

Age: -

 NOS1AP 0.962 - - - - 0.962 - Mlig455_010973 {REF} {Length: 3372} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=84.5]} {Human: ENSG00000198929, NOS1AP, nitric oxide synthase 1 adaptor protein, [RH, Score=210, Expect=2e-61]} {Mouse: ENSMUSG00000038473, Nos1ap, nitric oxide synthase 1 (neuronal) adaptor protein, [RH, Score=209, Expect=5e-61]} {Dmel: FBgn0261555, CG42673, [RH, Score=209, Expect=2e-59]} {Celegans: WBGene00001116, dyc-1, Dystrophin-like protein 1, [Score=205, Expect=2e-57]} {Smed: dd_Smed_v6_13377_0_1, dd_Smed_v6_13377_0_1, [Score=218, Expect=5e-64]} {RNA1509_56125} {RNA1310_16551, RNA1509_56125} {RNA1509_56125, RNA815_36051}
12. MligTC455_10809 13 0.27 Mlig455_033725

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_033725 {REF} {Length: 627} {NoTransDecoderORF} {RNA1310_115069} {RNA815_52668}
13. MligTC455_13004 80 1.67 Mlig455_021981

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_021981 {REF} {Length: 315} {NoTransDecoderORF} {RNA1509_32924} {RNA1310_30689} {RNA815_2608.1}
14. MligTC455_28598 102 2.13 Mlig455_057552

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_057552 {REF} {Length: 3851} {TRANSSPLICED} {RNA1509_60109} {RNA1310_21727} {RNA815_11299}
15. MligTC455_10297 15 0.32 Mlig455_015788

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_015788 {REF} {Length: 484} {NoTransDecoderORF} {RNA1509_25850} {RNA1310_7880} {RNA815_2645}
16. MligTC455_22007 102 2.13 Mlig455_031460

Neo: -

Age: -

 SLC35D1 0.951 - - - - 0.951 - Mlig455_031460 {REF} {Length: 2339} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=31.1]} {Human: ENSG00000116704, SLC35D1, solute carrier family 35 member D1, [RH, Score=228, Expect=4e-72]} {Mouse: ENSMUSG00000028521, Slc35d1, solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1, [RH, Score=221, Expect=4e-70]} {Dmel: FBgn0042641, frc, fringe connection, [RH, Score=227, Expect=3e-72]} {Celegans: WBGene00005025, sqv-7, UDP-sugar transporter sqv-7, [RH, Score=210, Expect=3e-66]} {Smed: dd_Smed_v6_14554_0_1, dd_Smed_v6_14554_0_1, [RH, Score=204, Expect=4e-64]} {RNA1310_31362} {RNA815_14367}
17. MligTC455_33441 27 0.55 Mlig455_068537

Neo: -

Age: Down-Up-Down

 GRID1 0.951 - - - - 0.951 - Mlig455_068537 {REF} {Length: 3049} {Pfam: Ligand-gated ion channel [PF00060.28, score=77.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=46.3]; Receptor family ligand binding region [PF01094.30, score=43.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=38.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=156, Expect=6e-39]} {Mouse: ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=153, Expect=1e-37]} {Dmel: FBgn0038837, CG3822, [Score=125, Expect=4e-29]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=117, Expect=8e-27]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=259, Expect=3e-78]} {RNA1310_13880.2} {RNA815_12458}

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