TomoSeq data search

Data search

Results for MligTC455_08352

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_08352	14	0.29	Mlig455_017214	Neo: Irradiation Age: Down-Down-Up	APEX1	Mlig455_017214 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=69.4]; Endonuclease-reverse transcriptase [PF14529.8, score=24.9]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=305, Expect=2e-100]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=310, Expect=1e-102]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=302, Expect=3e-95]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=238, Expect=3e-75]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=338, Expect=8e-114]} {RNA1509_16413} {RNA1310_25554} {RNA815_11218.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_08352

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_08352

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08352	14	0.29	Mlig455_017214	Neo: Irradiation Age: Down-Down-Up	APEX1	1	-	-	-	-	1.000	-	Mlig455_017214 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=69.4]; Endonuclease-reverse transcriptase [PF14529.8, score=24.9]} {Human: ENSG00000100823, APEX1, apurinic/apyrimidinic endodeoxyribonuclease 1, [RH, Score=305, Expect=2e-100]} {Mouse: ENSMUSG00000035960, Apex1, apurinic/apyrimidinic endonuclease 1, [RH, Score=310, Expect=1e-102]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [RH, Score=302, Expect=3e-95]} {Celegans: WBGene00001372, exo-3, DNA-(apurinic or apyrimidinic site) lyase, [RH, Score=238, Expect=3e-75]} {Smed: dd_Smed_v6_11417_0_1, dd_Smed_v6_11417_0_1, [RH, Score=338, Expect=8e-114]} {RNA1509_16413} {RNA1310_25554} {RNA815_11218.1}
2.	MligTC455_38875	37	0.78	Mlig455_029375, Mlig455_029415	Neo: - Age: logFC(26M/2M)=-0.939	GRIK2	0.983	-	-	-	-	0.983	-	Mlig455_029375 {REF} {Length: 3713} {Pfam: Ligand-gated ion channel [PF00060.28, score=88.9]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=58.3]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=34.5]; Receptor family ligand binding region [PF01094.30, score=20.4]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=136, Expect=2e-32]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=137, Expect=9e-33]} {Dmel: FBgn0038837, CG3822, [Score=150, Expect=4e-37]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=126, Expect=1e-29]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=242, Expect=3e-72]} {RNA1310_67049} {RNA815_49856} Mlig455_029415 {REF} {Length: 2520} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=25.5]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=73.9, Expect=5e-14]} {RNA1310_74947} {RNA815_49856}
3.	MligTC455_43789	48	0.99	Mlig455_029925	Neo: - Age: -	FARP1	0.981	-	-	-	-	0.981	-	Mlig455_029925 {REF} {Length: 2354} {Pfam: PH domain [PF00169.31, score=54.9]; RhoGEF domain [PF00621.22, score=25.8]} {Human: ENSG00000152767, FARP1, FERM, ARH/RhoGEF and pleckstrin domain protein 1, [Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000034066, Farp2, FERM, RhoGEF and pleckstrin domain protein 2, [Score=151, Expect=7e-38]; ENSMUSG00000025555, Farp1, FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived), [Score=149, Expect=3e-37]} {Dmel: FBgn0265082, Cdep, Chondrocyte-derived ezrin-like domain containing protein, [Score=118, Expect=2e-27]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=91.7, Expect=3e-19]} {Smed: dd_Smed_v6_14700_0_1, dd_Smed_v6_14700_0_1, [Score=154, Expect=2e-39]} {RNA1509_30091} {RNA1310_43814.1} {RNA815_20350}
4.	MligTC455_23638	20	0.41	Mlig455_025868, Mlig455_025928, Mlig455_025959	Neo: - Age: Up-Down-Down		0.977	-	-	-	-	0.977	-	Mlig455_025868 {REF} {Length: 1158} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=55.1]} {RNA1310_78629} Mlig455_025928 {REF} {Length: 3552} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=130.7]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=67.8, Expect=9e-12]} {RNA1310_55747} Mlig455_025959 {REF} {Length: 1931} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=129.3]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=68.9, Expect=4e-12]} {RNA1310_55747}
5.	MligTC455_30453	53	1.09	Mlig455_003193, Mlig455_021606	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_003193 {REF} {Length: 824} {NoTransDecoderORF} {RNA1310_55844} Mlig455_021606 {REF} {Length: 2417} {Pfam: F5/8 type C domain [PF00754.27, score=30.6]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=60.8, Expect=6e-12]} {RNA1310_52762} {RNA815_32413}
6.	MligTC455_17809	89	1.85	Mlig455_066801, Mlig455_066865	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_066801 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.4]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.2, Expect=3e-06]} {RNA1310_22785} {RNA815_13697} Mlig455_066865 {REF} {Length: 1886} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.2]} {Smed: dd_Smed_v6_54490_0_1, dd_Smed_v6_54490_0_1, [Score=46.6, Expect=3e-06]} {RNA1310_22785} {RNA815_13697}
7.	MligTC455_36762	10	0.21	Mlig455_057461	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_057461 {REF} {Length: 1806} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=24.8]} {Smed: dd_Smed_v6_38501_0_1, dd_Smed_v6_38501_0_1, [Score=155, Expect=6e-43]}
8.	MligTC455_03405	22	0.46	Mlig455_055645	Neo: - Age: - Region-enriched R4: 3.600/0.04744		0.971	-	-	-	-	0.971	-	Mlig455_055645 {REF} {Length: 458} {RNA1509_12042} {RNA1310_1137.2} {RNA815_55711}
9.	MligTC455_28598	102	2.13	Mlig455_057552	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_057552 {REF} {Length: 3851} {TRANSSPLICED} {RNA1509_60109} {RNA1310_21727} {RNA815_11299}
10.	MligTC455_13795	10	0.22	Mlig455_049344	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_049344 {REF} {Length: 485} {NoTransDecoderORF} {RNA1310_71916}
11.	MligTC455_29808	204	4.26	Mlig455_056288	Neo: Int S/G2/M Age: - Region-enriched R4: 3.556/0.04090	MCM3AP	0.967	-	-	-	-	0.967	-	Mlig455_056288 {REF} {Length: 6365} {Pfam: SAC3/GANP family [PF03399.18, score=315.0]} {Human: ENSG00000160294, MCM3AP, minichromosome maintenance complex component 3 associated protein, [RH, Score=330, Expect=2e-91]} {Mouse: ENSMUSG00000001150, Mcm3ap, minichromosome maintenance complex component 3 associated protein, [RH, Score=328, Expect=7e-91]} {Dmel: FBgn0028974, xmas-2, [RH, Score=289, Expect=3e-79]} {Celegans: WBGene00017642, F20D12.2, [RH, Score=210, Expect=7e-55]} {Smed: dd_Smed_v6_10065_0_1, dd_Smed_v6_10065_0_1, [RH, Score=273, Expect=3e-75]} {RNA1509_12513} {RNA1310_1606} {RNA815_453.1}
12.	MligTC455_07411	19	0.39	Mlig455_024512	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_024512 {REF} {Length: 1125} {NoTransDecoderORF} {RNA1310_46833}
13.	MligTC455_11706	49	1.02	Mlig455_060087	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_060087 {REF} {Length: 497} {NoTransDecoderORF} {RNA1509_39225} {RNA1310_33523} {RNA815_31934}
14.	MligTC455_19759	18	0.39	Mlig455_002694, Mlig455_002710	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_002694 {REF} {Length: 1408} {RNA1310_38437} {RNA815_40458} Mlig455_002710 {REF} {Length: 1745} {RNA1310_38437} {RNA815_40458}
15.	MligTC455_33441	27	0.55	Mlig455_068537	Neo: - Age: Down-Up-Down	GRID1	0.963	-	-	-	-	0.963	-	Mlig455_068537 {REF} {Length: 3049} {Pfam: Ligand-gated ion channel [PF00060.28, score=77.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=46.3]; Receptor family ligand binding region [PF01094.30, score=43.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=38.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=156, Expect=6e-39]} {Mouse: ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=153, Expect=1e-37]} {Dmel: FBgn0038837, CG3822, [Score=125, Expect=4e-29]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=117, Expect=8e-27]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=259, Expect=3e-78]} {RNA1310_13880.2} {RNA815_12458}
16.	MligTC455_15240	11	0.23	Mlig455_051415	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_051415 {REF} {Length: 607} {NoTransDecoderORF}
17.	MligTC455_32230	14	0.3	Mlig455_057830	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_057830 {REF} {Length: 735} {NoTransDecoderORF} {RNA1509_10105} {RNA1310_12936.2} {RNA815_17574.3}
18.	MligTC455_31615	336	7	Mlig455_042153, Mlig455_065866	Neo: - Age: -	USP5	0.955	-	-	-	-	0.955	-	Mlig455_042153 {REF} {Length: 1274} {TRANSSPLICED} {Pfam: Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=61.6]} {Human: ENSG00000111667, USP5, ubiquitin specific peptidase 5, [Score=211, Expect=2e-64]} {Mouse: ENSMUSG00000038429, Usp5, ubiquitin specific peptidase 5 (isopeptidase T), [Score=209, Expect=4e-64]} {Dmel: FBgn0035402, Usp5, Ubiquitin specific protease 5, [Score=200, Expect=6e-61]} {Celegans: WBGene00020839, usp-5, Ubiquitinyl hydrolase 1, [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_3655_0_1, dd_Smed_v6_3655_0_1, [Score=185, Expect=2e-58]} {RNA1509_20040} {RNA1310_16514.1} {RNA815_39489} Mlig455_065866 {REF} {Length: 2979} {TRANSSPLICED} {Pfam: Squalene/phytoene synthase [PF00494.21, score=103.7]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=58.7]} {Human: ENSG00000111667, USP5, ubiquitin specific peptidase 5, [Score=208, Expect=9e-59]} {Mouse: ENSMUSG00000038429, Usp5, ubiquitin specific peptidase 5 (isopeptidase T), [Score=207, Expect=2e-58]} {Dmel: FBgn0035402, Usp5, Ubiquitin specific protease 5, [Score=199, Expect=1e-55]} {Celegans: WBGene00020839, usp-5, Ubiquitinyl hydrolase 1, [Score=122, Expect=2e-29]} {Smed: dd_Smed_v6_3655_0_1, dd_Smed_v6_3655_0_1, [Score=182, Expect=6e-53]} {RNA1509_48859} {RNA1310_18155} {RNA815_13377}
19.	MligTC455_49768	145	3.02	Mlig455_004270	Neo: - Age: Up-Down-Down	ANOS1	0.955	-	-	-	-	0.955	-	Mlig455_004270 {REF} {Length: 4160} {Pfam: Fibronectin type III domain [PF00041.23, score=82.4]} {Human: ENSG00000011201, ANOS1, anosmin 1, [Score=108, Expect=2e-23]} {Dmel: FBgn0039155, Kal1, Kallmann syndrome 1, [Score=79.3, Expect=8e-15]} {Celegans: WBGene00002181, kal-1, KALlmann syndrome homolog, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_10075_0_1, dd_Smed_v6_10075_0_1, [Score=176, Expect=3e-45]} {RNA1509_44032} {RNA1310_20852} {RNA815_15013}
20.	MligTC455_09368	14	0.3	Mlig455_055483	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_055483 {REF} {Length: 459} {NoTransDecoderORF} {RNA1310_63892}
21.	MligTC455_33725	46	0.96	Mlig455_059862	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_059862 {REF} {Length: 2526} {tRNA: Asp(GTC), score=67.3} {RNA1310_22634} {RNA815_27671}
22.	MligTC455_41803	24	0.5	Mlig455_001656	Neo: - Age: -	TBL1XR1	0.954	-	-	-	-	0.954	-	Mlig455_001656 {REF} {Length: 1963} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=159.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=105.4]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=40.8]; Coatomer WD associated region [PF04053.16, score=26.2]; LisH [PF08513.13, score=24.5]} {Human: ENSG00000177565, TBL1XR1, transducin beta like 1 X-linked receptor 1, [RH, Score=689, Expect=0.0]; ENSG00000101849, TBL1X, transducin beta like 1 X-linked, [RH, Score=684, Expect=0.0]; ENSG00000092377, TBL1Y, transducin beta like 1 Y-linked, [RH, Score=677, Expect=0.0]} {Mouse: ENSMUSG00000027630, Tbl1xr1, transducin (beta)-like 1X-linked receptor 1, [RH, Score=694, Expect=0.0]; ENSMUSG00000025246, Tbl1x, transducin (beta)-like 1 X-linked, [RH, Score=684, Expect=0.0]} {Dmel: FBgn0263933, ebi, [RH, Score=573, Expect=0.0]} {Celegans: WBGene00021074, W07E6.2, [Score=110, Expect=7e-26]} {Smed: dd_Smed_v6_3247_0_1, dd_Smed_v6_3247_0_1, [RH, Score=519, Expect=2e-180]} {RNA1509_57475} {RNA1310_6496.1, RNA1509_57475} {RNA1509_57475, RNA815_1670}
23.	MligTC455_24919	8	0.17	Mlig455_011387	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_011387 {REF} {Length: 977} {NoTransDecoderORF} {RNA1310_88183}
24.	MligTC455_20956	77	1.6	Mlig455_008761	Neo: - Age: Up-Down-Down Region-enriched R8: 3.712/0.03504	GLRA3	0.952	-	-	-	-	0.952	-	Mlig455_008761 {REF} {Length: 3739} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=146.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=124.8]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [RH, Score=344, Expect=7e-114]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [RH, Score=338, Expect=2e-111]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [RH, Score=342, Expect=5e-113]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [RH, Score=336, Expect=7e-111]} {Dmel: FBgn0024963, GluClalpha, [RH, Score=291, Expect=2e-93]} {Celegans: WBGene00001593, glc-3, Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit, [RH, Score=256, Expect=7e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=253, Expect=1e-78]} {RNA1310_38552.1} {RNA815_6481}
25.	MligTC455_31485	214	4.45	Mlig455_069811	Neo: - Age: logFC(26M/2M)=-0.319	XIAP	0.951	-	-	-	-	0.951	-	Mlig455_069811 {REF} {Length: 3934} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.2]; Inhibitor of Apoptosis domain [PF00653.23, score=36.8]; Prokaryotic RING finger family 4 [PF14447.8, score=20.3]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=78.6, Expect=9e-15]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=77.0, Expect=2e-14]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=90.9, Expect=6e-19]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [Score=62.0, Expect=4e-10]} {RNA1509_28705, RNA1509_50002} {RNA1310_7949.1, RNA1509_28705, RNA1509_50002} {RNA1509_28705, RNA1509_50002, RNA815_4630}