Data search
Results for MligTC455_46730
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46730 | 96 | 1.99 | Mlig455_024629 | Neo: Int S/G2/M Age: - |
Mlig455_024629 {REF} {Length: 1676} {TRANSSPLICED} {RNA1509_48335} {RNA1310_57225} {RNA815_34102} |
Cumulative graph for MligTC455_46730
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.13 | 1.849 | 0.53657 | 1.00000 | |
| RegionR2 | 1.439 | 1.849 | 0.18746 | 0.54137 | |
| RegionR3 | -0.268 | 1.849 | 0.73078 | 1.00000 | |
| RegionR4 | -1.942 | 1.849 | 0.05329 | 0.20130 | |
| RegionR5 | -0.285 | 1.849 | 0.64616 | 0.99820 | |
| RegionR6 | 0.874 | 1.849 | 0.23554 | 0.81914 | |
| RegionR7 | 0.999 | 1.849 | 0.32123 | 0.95678 | |
| RegionR8 | 0.313 | 1.849 | 0.81430 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.81 | 1.849 | 0.76696 | 1.00000 | |
| RegenerationR2 | -0.328 | 1.849 | 0.73873 | 0.96921 | |
| RegenerationR3 | 2.269 | 1.849 | 0.01619 | 0.23299 | |
| RegenerationR4 | 1.329 | 1.849 | 0.16311 | 0.59678 | |
| RegenerationR5 | 1.172 | 1.849 | 0.12511 | 0.52842 | |
| RegenerationR6 | 0.13 | 1.849 | 0.87500 | 1.00000 | |
| RegenerationBL | -3.512 | 1.849 | 0.19060 | 0.52449 | |
| RegenerationTP | -3.55 | 1.849 | 0.15536 | 0.58301 |
Genes with expression patterns similar to MligTC455_46730
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46730 | 96 | 1.99 | Mlig455_024629 | Neo: Int S/G2/M Age: - |
5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_024629 {REF} {Length: 1676} {TRANSSPLICED} {RNA1509_48335} {RNA1310_57225} {RNA815_34102} | |
| 2. | MligTC455_21949 | 42 | 0.88 | Mlig455_011909 | Neo: Int S/G2/M Age: logFC(26M/2M)=1.149 |
1.788 | - | - | 0.966 | - | 0.822 | - | Mlig455_011909 {REF} {Length: 2730} {RNA1509_59141} {RNA1310_57197} {RNA815_37903} | |
| 3. | MligTC455_29400 | 63 | 1.31 | Mlig455_057781 | Neo: - Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_057781 {REF} {Length: 1746} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_51690} {RNA815_64986} | |
| 4. | MligTC455_40530 | 158 | 3.28 | Mlig455_061188 | Neo: - Age: Down-Up-Down |
0.97 | - | - | - | - | - | 0.970 | Mlig455_061188 {REF} {Length: 1859} {RNA1509_57518} {RNA1310_16108, RNA1509_57518} {RNA1509_57518, RNA815_16241} | |
| 5. | MligTC455_45568 | 73 | 1.52 | Mlig455_045036 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 2.439/0.00238 |
PRDX2 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_045036 {REF} {Length: 1089} {TRANSSPLICED} {Pfam: AhpC/TSA family [PF00578.23, score=126.9]; Redoxin [PF08534.12, score=59.0]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=52.3]} {Human: ENSG00000167815, PRDX2, peroxiredoxin 2, [RH, Score=271, Expect=8e-92]} {Mouse: ENSMUSG00000005161, Prdx2, peroxiredoxin 2, [RH, Score=277, Expect=2e-94]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [Score=268, Expect=4e-91]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=262, Expect=9e-89]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=284, Expect=1e-97]} {RNA1509_41676} {RNA1310_17406, RNA1509_41676} {RNA1509_41676, RNA815_10619} |
| 6. | MligTC455_28252 | 65 | 1.35 | Mlig455_036681 | Neo: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_036681 {REF} {Length: 2069} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=64.3, Expect=1e-14]} {RNA1509_20999} {RNA1310_76277} {RNA815_7836.4} | |
| 7. | MligTC455_46263 | 67 | 1.39 | Mlig455_058665 | Neo: - Age: - |
SLC26A1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_058665 {REF} {Length: 1886} {Pfam: STAS domain [PF01740.23, score=89.4]; Sulfate permease family [PF00916.22, score=38.8]; STAS domain [PF13466.8, score=26.9]} {Human: ENSG00000145217, SLC26A1, solute carrier family 26 member 1, [Score=68.2, Expect=8e-12]} {Mouse: ENSMUSG00000020651, Slc26a4, solute carrier family 26, member 4, [Score=71.2, Expect=5e-13]} {Dmel: FBgn0036770, Prestin, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00017464, sulp-2, Anion transporter SULP-2; SULfate Permease family, [Score=69.7, Expect=9e-13]} {Smed: dd_Smed_v6_10602_0_1, dd_Smed_v6_10602_0_1, [Score=71.6, Expect=1e-13]} {RNA1509_45237} {RNA1310_30910} {RNA815_30992} |
| 8. | MligTC455_03964 | 84 | 1.76 | Mlig455_010902 | Neo: - Age: - Region-enriched R4: 6.854/0.00058 |
0.957 | - | - | 0.957 | - | - | - | Mlig455_010902 {REF} {Length: 463} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=25.0]} {Smed: dd_Smed_v6_3953_0_1, dd_Smed_v6_3953_0_1, [Score=46.2, Expect=3e-08]} {RNA1509_21207} {RNA1310_23274} {RNA815_28192} | |
| 9. | MligTC455_40036 | 9 | 0.19 | Mlig455_027002 | Neo: - Age: - |
KCNK18 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_027002 {REF} {Length: 3523} {Pfam: Ion channel [PF07885.18, score=113.3]; Ion transport protein [PF00520.33, score=30.5]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=84.0, Expect=1e-16]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=85.9, Expect=2e-17]} {Dmel: FBgn0033257, sand, sandman, [RH, Score=144, Expect=4e-37]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=164, Expect=2e-44]} {Smed: dd_Smed_v6_13333_0_1, dd_Smed_v6_13333_0_1, [RH, Score=213, Expect=2e-61]} {RNA1509_52667} {RNA1310_10381} {RNA815_59005} |
| 10. | MligTC455_16625 | 45 | 0.94 | Mlig455_019351 | Neo: - Age: - Region-enriched R3: 4.565/0.00157 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_019351 {REF} {Length: 2232} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=38.9]; Male sterility protein [PF07993.14, score=34.4]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=30.8]; RmlD substrate binding domain [PF04321.19, score=21.9]; GDP-mannose 4,6 dehydratase [PF16363.7, score=19.1]} {Smed: dd_Smed_v6_12075_0_1, dd_Smed_v6_12075_0_1, [Score=56.6, Expect=9e-09]} {RNA1509_44711} {RNA1310_30985} {RNA815_13916} | |
| 11. | MligTC455_19699 | 114 | 2.37 | Mlig455_012898 | Neo: - Age: - |
GHDC | 0.953 | - | - | - | - | 0.953 | - | Mlig455_012898 {REF} {Length: 2514} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=338.2]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [RH, Score=81.6, Expect=1e-15]} {RNA1509_16783, RNA1509_23182} {RNA1310_1835.1, RNA1509_16783, RNA1509_23182} {RNA1509_16783, RNA1509_23182, RNA815_4021} |
| 12. | MligTC455_23929 | 63 | 1.31 | Mlig455_054721 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_054721 {REF} {Length: 4323} {tRNA: Val(CAC),pseudo, score=21.0} {RNA1509_18097} {RNA1310_31338} {RNA815_2868} | |
| 13. | MligTC455_35609 | 55 | 1.14 | Mlig455_066387 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_066387 {REF} {Length: 4074} {TRANSSPLICED} {Pfam: RING-type zinc-finger [PF13445.8, score=31.5]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.4]; Ring finger domain [PF13639.8, score=24.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.6]; zinc-RING finger domain [PF14634.8, score=21.8]; Prokaryotic RING finger family 4 [PF14447.8, score=21.0]} {RNA1509_23091} {RNA1310_4343} {RNA815_2957.1} | |
| 14. | MligTC455_25800 | 19 | 0.39 | Mlig455_020935 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_020935 {REF} {Length: 1333} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [RH, Score=54.7, Expect=7e-10]} {RNA1509_46103} {RNA1310_6410.1} {RNA815_31889} | |
| 15. | MligTC455_26288 | 33 | 0.68 | Mlig455_030608, Mlig455_031031 | Neo: - Age: logFC(26M/2M)=1.312 |
RARRES3 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_030608 {REF} {Length: 893} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=64.5]} {Human: ENSG00000133321, RARRES3, retinoic acid receptor responder 3, [Score=65.9, Expect=5e-13]} {Mouse: ENSMUSG00000060675, Pla2g16, phospholipase A2, group XVI, [RH, Score=58.5, Expect=2e-10]; ENSMUSG00000022525, Hrasls, HRAS-like suppressor, [RH, Score=58.5, Expect=2e-10]} {RNA1310_36500.1} {RNA815_19807} Mlig455_031031 {REF} {Length: 4200} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=64.5]} {Human: ENSG00000133321, RARRES3, retinoic acid receptor responder 3, [Score=65.9, Expect=5e-13]} {Mouse: ENSMUSG00000060675, Pla2g16, phospholipase A2, group XVI, [RH, Score=58.5, Expect=2e-10]; ENSMUSG00000022525, Hrasls, HRAS-like suppressor, [RH, Score=58.5, Expect=2e-10]} {RNA1509_48696} {RNA1310_17404.1, RNA1509_48696} {RNA1509_48696, RNA815_5685.1} |
| 16. | MligTC455_11402 | 21 | 0.44 | Mlig455_058743 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_058743 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59423} {RNA1310_39651} {RNA815_29881} | |
| 17. | MligTC455_25794 | 22 | 0.47 | Mlig455_007596 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_007596 {REF} {Length: 1286} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [RH, Score=54.7, Expect=7e-10]} {RNA1509_46103} {RNA1310_6410.1} {RNA815_31889} |
Berezikov Lab - 2020-2021 © ERIBA