TomoSeq data search

Data search

Results for MligTC455_04076

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04076

40

0.83

Mlig455_039207

Neo: -

Age: -

SHOC2

Mlig455_039207 {REF} {Length: 3742} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=240.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=136.1]; Leucine Rich Repeat [PF00560.35, score=38.2]; Leucine-rich repeat [PF14580.8, score=36.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=19.5]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=407, Expect=3e-134]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=410, Expect=1e-135]} {Dmel: FBgn0038504, Sur-8, [Score=422, Expect=1e-139]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=393, Expect=1e-129]} {Smed: dd_Smed_v6_1909_0_1, dd_Smed_v6_1909_0_1, [Score=385, Expect=4e-126]} {RNA1509_19249} {RNA1310_7161.1} {RNA815_7354}

Cumulative graph for MligTC455_04076

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.154	1.34	1.00000	1.00000
RegionR2	1.236	1.34	0.41123	0.80471
RegionR3	-0.162	1.34	0.82904	1.00000
RegionR4	1.775	1.34	0.21210	0.49739
RegionR5	1.451	1.34	0.21769	0.51824
RegionR6	0.414	1.34	0.66831	1.00000
RegionR7	0.258	1.34	0.75675	1.00000
RegionR8	-2.818	1.34	0.99988	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.776	1.34	0.99995	1.00000
RegenerationR2	0.254	1.34	0.73356	0.96710
RegenerationR3	0.861	1.34	0.45242	0.83282
RegenerationR4	-0.365	1.34	0.70691	0.95572
RegenerationR5	-0.601	1.34	0.46785	0.84096
RegenerationR6	0.553	1.34	0.62414	0.88346
RegenerationBL	2.441	1.34	0.15018	0.46289
RegenerationTP	-1.877	1.34	0.99961	1.00000

Genes with expression patterns similar to MligTC455_04076

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04076	40	0.83	Mlig455_039207	Neo: - Age: -	SHOC2	4	-	1.000	1.000	-	1.000	1.000	Mlig455_039207 {REF} {Length: 3742} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=240.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=136.1]; Leucine Rich Repeat [PF00560.35, score=38.2]; Leucine-rich repeat [PF14580.8, score=36.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=19.5]} {Human: ENSG00000108061, SHOC2, SHOC2, leucine rich repeat scaffold protein, [Score=407, Expect=3e-134]} {Mouse: ENSMUSG00000024976, Shoc2, Shoc2, leucine rich repeat scaffold protein, [Score=410, Expect=1e-135]} {Dmel: FBgn0038504, Sur-8, [Score=422, Expect=1e-139]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=393, Expect=1e-129]} {Smed: dd_Smed_v6_1909_0_1, dd_Smed_v6_1909_0_1, [Score=385, Expect=4e-126]} {RNA1509_19249} {RNA1310_7161.1} {RNA815_7354}
2.	MligTC455_34080	658	13.7	Mlig455_003967, Mlig455_012752, Mlig455_018306, Mlig455_019817, Mlig455_038340, Mlig455_042550, Mlig455_060909, Mlig455_062400, Mlig455_069367	Neo: - Age: - Regeneration-upregulated BL: 2.587 Regeneration-enriched BL: 2.587		0.984	-	-	-	-	0.984	-	Mlig455_003967 {REF} {Length: 2876} {RNA1509_34107} {RNA1310_22004} {RNA815_1218} Mlig455_012752 {REF} {Length: 3352} {RNA1509_34107} {RNA1310_22004} {RNA815_1218} Mlig455_018306 {REF} {Length: 6576} {TRANSSPLICED} {RNA1509_15268} {RNA1310_1680} {RNA815_1218} Mlig455_019817 {REF} {Length: 2491} {RNA1509_34107} {RNA1310_14691} {RNA815_26581.1} Mlig455_038340 {REF} {Length: 2509} {RNA1509_34107} {RNA1310_22004} {RNA815_26581.1} Mlig455_042550 {REF} {Length: 3334} {RNA1509_34107} {RNA1310_22004} {RNA815_1218} Mlig455_060909 {REF} {Length: 2351} {RNA1509_34107} {RNA1310_22004} {RNA815_26581.1} Mlig455_062400 {REF} {Length: 4208} {RNA1509_15268} {RNA1310_1680} {RNA815_1218} Mlig455_069367 {REF} {Length: 6745} {TRANSSPLICED} {RNA1509_15268} {RNA1310_1680, RNA1509_15268} {RNA1509_15268, RNA815_1218}
3.	MligTC455_19869	157	3.27	Mlig455_046439, Mlig455_046468	Neo: - Age: -	ZNF324	0.978	-	-	-	-	-	0.978	Mlig455_046439 {REF} {Length: 4053} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=58.9]; Zinc finger, C2H2 type [PF00096.28, score=53.6]; Zinc-finger double domain [PF13465.8, score=37.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=25.6]} {Human: ENSG00000083812, ZNF324, zinc finger protein 324, [Score=101, Expect=2e-21]} {Mouse: ENSMUSG00000004500, Zfp324, zinc finger protein 324, [Score=102, Expect=3e-22]} {Dmel: FBgn0033934, CG17385, [Score=82.8, Expect=6e-17]} {Celegans: WBGene00011066, ztf-15, Zinc finger putative Transcription Factor family, [RH, Score=67.0, Expect=4e-11]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=83.2, Expect=1e-17]} {RNA1509_14607} {RNA1310_8185} {RNA815_15544} Mlig455_046468 {REF} {Length: 1996} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=69.8]; Zinc finger, C2H2 type [PF00096.28, score=62.0]; Zinc-finger double domain [PF13465.8, score=46.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=36.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=25.2]} {Human: ENSG00000083812, ZNF324, zinc finger protein 324, [Score=96.3, Expect=4e-22]; ENSG00000116809, ZBTB17, zinc finger and BTB domain containing 17, [Score=92.0, Expect=3e-20]; ENSG00000189180, ZNF33A, zinc finger protein 33A, [Score=92.0, Expect=3e-20]; ENSG00000249471, ZNF324B, zinc finger protein 324B, [Score=91.7, Expect=3e-20]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=91.7, Expect=3e-20]} {Mouse: ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=97.4, Expect=3e-22]; ENSMUSG00000004500, Zfp324, zinc finger protein 324, [Score=96.3, Expect=5e-22]} {Dmel: FBgn0037617, nom, numerous disordered muscles, [Score=77.0, Expect=8e-16]} {Celegans: WBGene00011066, ztf-15, Zinc finger putative Transcription Factor family, [RH, Score=67.4, Expect=2e-12]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=73.6, Expect=6e-15]} {RNA1509_40166, RNA1509_56111} {RNA1310_14502, RNA1509_40166, RNA1509_56111} {RNA1509_40166, RNA1509_56111, RNA815_25948}
4.	MligTC455_47520	112	2.32	Mlig455_055872	Neo: - Age: -	TTLL4	0.978	-	-	-	-	-	0.978	Mlig455_055872 {REF} {Length: 5195} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=278.3]; YheC/D like ATP-grasp [PF14398.8, score=32.9]} {Human: ENSG00000135912, TTLL4, tubulin tyrosine ligase like 4, [Score=391, Expect=6e-118]} {Mouse: ENSMUSG00000033257, Ttll4, tubulin tyrosine ligase-like family, member 4, [Score=373, Expect=2e-111]} {Dmel: FBgn0026147, CG16833, [Score=343, Expect=1e-103]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=257, Expect=2e-74]} {Smed: dd_Smed_v6_17034_0_1, dd_Smed_v6_17034_0_1, [Score=431, Expect=2e-133]} {RNA1509_16750} {RNA1310_2257, RNA1509_16750} {RNA1509_16750, RNA815_2812}
5.	MligTC455_20330	72	1.5	Mlig455_035946	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_035946 {REF} {Length: 2250} {TRANSSPLICED} {Pfam: Protein moonraker [PF15718.7, score=24.3]} {RNA1509_11006} {RNA1310_10101} {RNA815_15998}
6.	MligTC455_34291	254	5.29	Mlig455_028897	Neo: Irradiation Age: logFC(26M/2M)=0.396 Region-enriched R5: 1.944/0.00597		0.974	-	-	-	-	0.974	-	Mlig455_028897 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=41.4]} {RNA1509_26437, RNA1509_34546, RNA1509_40238} {RNA1310_13030, RNA1509_26437, RNA1509_34546, RNA1509_40238} {RNA1509_26437, RNA1509_34546, RNA1509_40238, RNA815_6218}
7.	MligTC455_51609	26	0.55	Mlig455_059418	Neo: - Age: -	FAAH	0.972	-	-	-	-	-	0.972	Mlig455_059418 {REF} {Length: 2674} {Pfam: Amidase [PF01425.23, score=256.5]} {Human: ENSG00000117480, FAAH, fatty acid amide hydrolase, [Score=243, Expect=7e-72]} {Mouse: ENSMUSG00000034171, Faah, fatty acid amide hydrolase, [Score=252, Expect=2e-75]} {Dmel: FBgn0037547, CG7910, [Score=103, Expect=4e-23]} {Celegans: WBGene00019068, faah-3, Fatty Acid Amide Hydrolase homolog, [Score=266, Expect=3e-81]} {Smed: dd_Smed_v6_3298_0_1, dd_Smed_v6_3298_0_1, [Score=358, Expect=3e-116]} {RNA1310_26916} {RNA815_54676}
8.	MligTC455_51292	104	2.17	Mlig455_015361	Neo: - Age: -	PPCDC	0.969	-	-	-	-	0.969	-	Mlig455_015361 {REF} {Length: 1758} {TRANSSPLICED} {Pfam: Flavoprotein [PF02441.21, score=149.4]} {Human: ENSG00000138621, PPCDC, phosphopantothenoylcysteine decarboxylase, [RH, Score=202, Expect=1e-65]} {Mouse: ENSMUSG00000063849, Ppcdc, phosphopantothenoylcysteine decarboxylase, [RH, Score=204, Expect=9e-67]} {Dmel: FBgn0050290, Ppcdc, Phosphopantothenoylcysteine decarboxylase, [RH, Score=185, Expect=1e-59]} {Celegans: WBGene00009138, F25H9.6, [RH, Score=159, Expect=6e-49]} {Smed: dd_Smed_v6_7368_0_1, dd_Smed_v6_7368_0_1, [RH, Score=172, Expect=2e-54]} {RNA1509_44762} {RNA1310_40754} {RNA815_25782}
9.	MligTC455_05780	56	1.16	Mlig455_029153	Neo: - Age: -	ARHGEF17	0.968	-	-	-	-	-	0.968	Mlig455_029153 {REF} {Length: 6124} {TRANSSPLICED} {Pfam: WD40 repeated domain [PF19056.2, score=138.9]; RhoGEF domain [PF00621.22, score=136.8]} {Human: ENSG00000110237, ARHGEF17, Rho guanine nucleotide exchange factor 17, [Score=229, Expect=7e-61]} {Mouse: ENSMUSG00000032875, Arhgef17, Rho guanine nucleotide exchange factor (GEF) 17, [Score=199, Expect=8e-51]} {Dmel: FBgn0262562, CG43102, [Score=327, Expect=4e-91]} {Celegans: WBGene00019832, osg-1, Rho guanine nucleotide exchange factor osg-1, [Score=190, Expect=1e-48]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=358, Expect=2e-102]} {RNA1310_16394} {RNA815_30274}
10.	MligTC455_38576	61	1.26	Mlig455_066645	Neo: - Age: Up-Up-Down	FBXL20	0.958	-	-	-	-	0.958	-	Mlig455_066645 {REF} {Length: 4642} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=88.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=60.0]; F-box-like [PF12937.9, score=51.6]; F-box/LRR-repeat protein 18 C-terminal [PF19729.1, score=42.3]; F-box domain [PF00646.35, score=37.7]; Leucine Rich Repeat [PF00560.35, score=34.3]; Leucine rich repeat [PF13855.8, score=24.6]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [RH, Score=410, Expect=2e-140]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [RH, Score=407, Expect=2e-139]} {Dmel: FBgn0033639, CG9003, [RH, Score=426, Expect=5e-144]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [RH, Score=369, Expect=2e-124]} {Smed: dd_Smed_v6_6761_0_1, dd_Smed_v6_6761_0_1, [RH, Score=358, Expect=5e-120]} {RNA1509_19431} {RNA1310_17051, RNA1509_19431} {RNA1509_19431, RNA815_7837}
11.	MligTC455_13151	56	1.18	Mlig455_034235	Neo: - Age: logFC(26M/2M)=0.751	KYAT3	0.957	-	-	0.957	-	-	-	Mlig455_034235 {REF} {Length: 1387} {Pfam: Aminotransferase class I and II [PF00155.23, score=101.6]} {Human: ENSG00000137944, KYAT3, kynurenine aminotransferase 3, [Score=65.5, Expect=5e-11]} {Mouse: ENSMUSG00000040213, Kyat3, kynurenine aminotransferase 3, [Score=64.3, Expect=8e-11]} {Dmel: FBgn0037955, CG6950, [Score=67.0, Expect=7e-12]} {Celegans: WBGene00010984, nkat-3, Nematode Kynurenine AminoTransferase, [Score=70.5, Expect=5e-13]} {Smed: dd_Smed_v6_3796_0_1, dd_Smed_v6_3796_0_1, [Score=66.6, Expect=5e-12]} {RNA1310_24117} {RNA815_18458}
12.	MligTC455_34059	83	1.73	Mlig455_031977	Neo: - Age: Down-Up-Down	CYP2U1	0.951	-	-	-	-	-	0.951	Mlig455_031977 {REF} {Length: 2187} {Pfam: Cytochrome P450 [PF00067.24, score=312.0]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=226, Expect=6e-67]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=215, Expect=3e-63]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=242, Expect=1e-73]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=238, Expect=5e-72]; ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=230, Expect=6e-69]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=230, Expect=5e-69]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=223, Expect=4e-66]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=203, Expect=4e-59]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=252, Expect=1e-77]} {RNA1509_50629} {RNA1310_14742, RNA1509_50629} {RNA1509_50629, RNA815_5450}

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