TomoSeq data search

Data search

Results for MligTC455_04858

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04858	23	0.48	Mlig455_024920	Neo: - Age: Up-Down-Down		Mlig455_024920 {REF} {Length: 3968} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=23.5]} {Smed: dd_Smed_v6_20712_0_1, dd_Smed_v6_20712_0_1, [Score=62.0, Expect=5e-12]} {RNA1509_36367} {RNA1310_69230} {RNA815_43979}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_04858

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	5.533	0.841	0.04888	0.52655
RegionR2	0.445	0.841	0.69715	1.00000
RegionR3	-1.623	0.841	0.97659	1.00000
RegionR4	1.183	0.841	0.35895	0.68170
RegionR5	0.167	0.841	0.69822	1.00000
RegionR6	-0.246	0.841	0.83252	1.00000
RegionR7	-2.744	0.841	0.99961	1.00000
RegionR8	-2.715	0.841	0.99953	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.794	0.841	0.20077	0.94047
RegenerationR2	-3.052	0.841	0.03369	0.30284
RegenerationR3	1.175	0.841	0.52979	0.87163
RegenerationR4	-1.361	0.841	0.29049	0.73446
RegenerationR5	-2.889	0.841	0.02255	0.25849
RegenerationR6	-0.114	0.841	0.84441	0.99784
RegenerationBL	-1.144	0.841	0.99980	1.00000
RegenerationTP	-0.537	0.841	0.99993	1.00000

Genes with expression patterns similar to MligTC455_04858

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04858	23	0.48	Mlig455_024920	Neo: - Age: Up-Down-Down		3	1.000	1.000	-	-	1.000	-	Mlig455_024920 {REF} {Length: 3968} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=23.5]} {Smed: dd_Smed_v6_20712_0_1, dd_Smed_v6_20712_0_1, [Score=62.0, Expect=5e-12]} {RNA1509_36367} {RNA1310_69230} {RNA815_43979}
2.	MligTC455_00534	9	0.19	Mlig455_046895	Neo: - Age: -		0.999	-	-	-	-	0.999	-	Mlig455_046895 {REF} {Length: 262} {NoTransDecoderORF}
3.	MligTC455_08777	8	0.17	Mlig455_068101	Neo: - Age: Down-Up-Down		0.999	-	-	-	-	0.999	-	Mlig455_068101 {REF} {Length: 601} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_54477} {RNA1310_61043} {RNA815_11673}
4.	MligTC455_25061	16	0.34	Mlig455_013138	Neo: - Age: logFC(26M/2M)=-0.554	RASEF	0.999	-	-	-	-	0.999	-	Mlig455_013138 {REF} {Length: 3781} {Pfam: Ras family [PF00071.24, score=110.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.0]; EF-hand domain pair [PF13499.8, score=42.2]; EF hand [PF00036.34, score=41.5]; ADP-ribosylation factor family [PF00025.23, score=40.5]; EF-hand domain [PF13405.8, score=39.5]; EF-hand domain pair [PF13833.8, score=33.0]; EF hand [PF13202.8, score=29.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.7]} {Human: ENSG00000165105, RASEF, RAS and EF-hand domain containing, [Score=149, Expect=2e-36]} {Mouse: ENSMUSG00000043003, Rasef, RAS and EF hand domain containing, [Score=142, Expect=3e-35]} {Dmel: FBgn0285937, Rab1, [Score=93.2, Expect=2e-21]} {Celegans: WBGene00007067, 4R79.2, Rab-44, [Score=119, Expect=2e-29]} {Smed: dd_Smed_v6_4284_0_1, dd_Smed_v6_4284_0_1, [Score=171, Expect=4e-44]} {RNA1509_21698} {RNA1310_2939.1} {RNA815_9067}
5.	MligTC455_41216	14	0.29	Mlig455_048411	Neo: - Age: -		0.999	-	-	-	-	0.999	-	Mlig455_048411 {REF} {Length: 1979} {NoTransDecoderORF} {RNA1310_52358}
6.	MligTC455_03660	11	0.23	Mlig455_053334	Neo: - Age: -		0.998	-	-	-	-	0.998	-	Mlig455_053334 {REF} {Length: 10438} {RNA1509_13570} {RNA1310_105265, RNA1509_13570}
7.	MligTC455_08696	9	0.19	Mlig455_068591	Neo: - Age: -		0.994	-	-	-	-	0.994	-	Mlig455_068591 {REF} {Length: 89} {NoTransDecoderORF} {RNA1509_22353} {RNA1310_3519} {RNA815_9210.1}
8.	MligTC455_55286	4	0.08	Mlig455_013528	Neo: - Age: -	TRHR	0.992	-	-	-	-	0.992	-	Mlig455_013528 {REF} {Length: 827} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=105.7]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=24.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.5]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=156, Expect=1e-44]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=154, Expect=8e-44]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=150, Expect=1e-42]} {Dmel: FBgn0038874, ETHR, [Score=101, Expect=3e-24]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=143, Expect=3e-40]} {Smed: dd_Smed_v6_19246_0_1, dd_Smed_v6_19246_0_1, [Score=157, Expect=5e-46]} {RNA1310_139198}
9.	MligTC455_03936	12	0.24	Mlig455_060223, Mlig455_060238	Neo: - Age: logFC(26M/2M)=-0.322	RXRA	0.985	-	-	-	-	0.985	-	Mlig455_060223 {REF} {Length: 1175} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.0]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=33.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=205, Expect=3e-61]; ENSG00000143171, RXRG, retinoid X receptor gamma, [Score=200, Expect=1e-60]; ENSG00000227322, RXRB, retinoid X receptor beta, [Score=198, Expect=1e-59]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=205, Expect=2e-61]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=202, Expect=2e-61]; ENSMUSG00000039656, Rxrb, retinoid X receptor beta, [Score=196, Expect=3e-58]} {Dmel: FBgn0003964, usp, ultraspiracle, [Score=147, Expect=1e-39]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [RH, Score=145, Expect=3e-39]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [Score=152, Expect=1e-41]} {RNA1509_9759} {RNA1310_9134.2} {RNA815_45364} Mlig455_060238 {REF} {Length: 1175} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=33.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=204, Expect=6e-61]; ENSG00000143171, RXRG, retinoid X receptor gamma, [Score=200, Expect=1e-60]; ENSG00000227322, RXRB, retinoid X receptor beta, [Score=198, Expect=8e-60]; ENSG00000235712, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000231321, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000228333, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000206289, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000204231, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=205, Expect=3e-61]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=202, Expect=2e-61]; ENSMUSG00000039656, Rxrb, retinoid X receptor beta, [Score=196, Expect=2e-58]} {Dmel: FBgn0003964, usp, ultraspiracle, [Score=147, Expect=2e-39]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [RH, Score=146, Expect=1e-39]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [Score=155, Expect=6e-43]} {RNA1509_9759} {RNA1310_9134.2} {RNA815_45364}
10.	MligTC455_07572	8	0.16	Mlig455_030571	Neo: - Age: -		0.985	-	-	-	-	0.985	-	Mlig455_030571 {REF} {Length: 824} {NoTransDecoderORF}
11.	MligTC455_56260	12	0.25	Mlig455_006491	Neo: - Age: -		0.984	-	-	-	-	0.984	-	Mlig455_006491 {REF} {Length: 588} {NoTransDecoderORF} {RNA1310_98545}
12.	MligTC455_06677	36	0.75	Mlig455_046172	Neo: - Age: Down-Up-Down		0.983	-	-	-	-	0.983	-	Mlig455_046172 {REF} {Length: 571} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30549} {RNA1310_22209.1} {RNA815_17275}
13.	MligTC455_19543	6	0.12	Mlig455_058798	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_058798 {REF} {Length: 1327} {NoTransDecoderORF} {RNA1509_37415} {RNA1310_49986.1} {RNA815_34381}
14.	MligTC455_31046	12	0.25	Mlig455_054928	Neo: - Age: -	LRRN3	0.983	-	-	-	-	0.983	-	Mlig455_054928 {REF} {Length: 3787} {Pfam: Immunoglobulin domain [PF13927.8, score=35.6]; Immunoglobulin I-set domain [PF07679.18, score=34.7]; Immunoglobulin domain [PF00047.27, score=29.3]; Apolipoprotein A1/A4/E domain [PF01442.20, score=20.1]} {Human: ENSG00000173114, LRRN3, leucine rich repeat neuronal 3, [Score=53.5, Expect=1e-06]} {Dmel: FBgn0032479, CG16974, [RH, Score=114, Expect=1e-25]} {RNA1509_10344} {RNA1310_3046.1} {RNA815_12103}
15.	MligTC455_44239	43	0.9	Mlig455_002480	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_002480 {REF} {Length: 1329} {NoTransDecoderORF} {RNA1509_49118} {RNA1310_34083} {RNA815_11074.2}
16.	MligTC455_50620	10	0.22	Mlig455_050056	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_050056 {REF} {Length: 1732} {NoTransDecoderORF} {RNA1509_2617} {RNA1310_104916} {RNA815_36229}
17.	MligTC455_13899	14	0.29	Mlig455_007781	Neo: - Age: Up-Down-Up	CACNA1H	0.969	-	-	-	-	0.969	-	Mlig455_007781 {REF} {Length: 6753} {Pfam: Ion transport protein [PF00520.33, score=786.6]; Polycystin cation channel [PF08016.14, score=57.8]; FAM176 family [PF14851.8, score=19.4]} {Human: ENSG00000196557, CACNA1H, calcium voltage-gated channel subunit alpha1 H, [RH, Score=1032, Expect=0.0]; ENSG00000006283, CACNA1G, calcium voltage-gated channel subunit alpha1 G, [RH, Score=1006, Expect=0.0]} {Mouse: ENSMUSG00000024112, Cacna1h, calcium channel, voltage-dependent, T type, alpha 1H subunit, [RH, Score=1035, Expect=0.0]; ENSMUSG00000020866, Cacna1g, calcium channel, voltage-dependent, T type, alpha 1G subunit, [RH, Score=1003, Expect=0.0]} {Dmel: FBgn0264386, Ca-alpha1T, Ca[2+]-channel protein alpha[[1]] subunit T, [RH, Score=862, Expect=0.0]} {Celegans: WBGene00000367, cca-1, Voltage-dependent T-type calcium channel subunit alpha, [RH, Score=758, Expect=0.0]} {Smed: dd_Smed_v6_14730_0_1, dd_Smed_v6_14730_0_1, [RH, Score=1701, Expect=0.0]} {RNA1509_48619} {RNA1310_5687} {RNA815_28647}
18.	MligTC455_47765	12	0.25	Mlig455_068551	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_068551 {REF} {Length: 4208} {RNA1509_51612} {RNA1310_8696} {RNA815_20831}
19.	MligTC455_06281	16	0.34	Mlig455_028311	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_028311 {REF} {Length: 199} {NoTransDecoderORF} {RNA1509_41075} {RNA1310_63673.1} {RNA815_48915}
20.	MligTC455_06429	11	0.23	Mlig455_036363	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_036363 {REF} {Length: 672} {NoTransDecoderORF} {RNA1509_33228} {RNA1310_23229}
21.	MligTC455_10194	11	0.23	Mlig455_032671	Neo: - Age: -	ALKBH3	0.959	-	-	-	-	0.959	-	Mlig455_032671 {REF} {Length: 1189} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=89.0]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=100, Expect=1e-23]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=103, Expect=6e-25]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=95.5, Expect=3e-22]} {RNA1509_52195} {RNA1310_39725}
22.	MligTC455_33129	36	0.75	Mlig455_057498	Neo: - Age: -	TACR2	0.959	-	-	-	-	0.959	-	Mlig455_057498 {REF} {Length: 3137} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=132.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=24.9]} {Human: ENSG00000075073, TACR2, tachykinin receptor 2, [Score=122, Expect=6e-30]; ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=129, Expect=2e-32]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=126, Expect=3e-31]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_17752_0_1, dd_Smed_v6_17752_0_1, [Score=207, Expect=2e-61]} {RNA1310_49566} {RNA815_29712}
23.	MligTC455_17442	76	1.59	Mlig455_046650, Mlig455_046672	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_046650 {REF} {Length: 2676} {RNA1310_43791} {RNA815_38592} Mlig455_046672 {REF} {Length: 2830} {RNA1310_43791} {RNA815_38592}
24.	MligTC455_54270	35	0.72	Mlig455_034654	Neo: - Age: -	UNCX	0.955	-	-	-	-	0.955	-	Mlig455_034654 {REF} {Length: 2992} {Pfam: Homeodomain [PF00046.31, score=80.8]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=170, Expect=8e-47]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=171, Expect=3e-47]} {Dmel: FBgn0024184, unc-4, [RH, Score=166, Expect=2e-45]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=146, Expect=8e-41]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=171, Expect=6e-49]} {RNA1509_31519} {RNA1310_62265} {RNA815_4812}
25.	MligTC455_56116	21	0.43	Mlig455_008372	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_008372 {REF} {Length: 361} {NoTransDecoderORF}
26.	MligTC455_02404	4	0.09	Mlig455_010289	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_010289 {REF} {Length: 219} {NoTransDecoderORF} {RNA1310_61437}