Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_05589 | 5 | 0.10 | Mlig455_005329 | Neo: - Age: - |
Mlig455_005329 {REF} {Length: 983} {RNA1509_20735} {RNA1310_8770} {RNA815_4829.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | - | - | - | - | |
RegionR2 | - | - | - | - | |
RegionR3 | - | - | - | - | |
RegionR4 | - | - | - | - | |
RegionR5 | - | - | - | - | |
RegionR6 | - | - | - | - | |
RegionR7 | - | - | - | - | |
RegionR8 | - | - | - | - |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | - | - | - | - | |
RegenerationR2 | - | - | - | - | |
RegenerationR3 | - | - | - | - | |
RegenerationR4 | - | - | - | - | |
RegenerationR5 | - | - | - | - | |
RegenerationR6 | - | - | - | - | |
RegenerationBL | - | - | - | - | |
RegenerationTP | - | - | - | - |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_05589 | 5 | 0.1 | Mlig455_005329 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_005329 {REF} {Length: 983} {RNA1509_20735} {RNA1310_8770} {RNA815_4829.1} | |
2. | MligTC455_09580 | 19 | 0.4 | Mlig455_010996 | Neo: - Age: - |
0.986 | - | - | - | - | 0.986 | - | Mlig455_010996 {REF} {Length: 1464} {NoTransDecoderORF} {RNA1310_106744} {RNA815_31856} | |
3. | MligTC455_50039 | 12 | 0.24 | Mlig455_051694 | Neo: - Age: logFC(26M/2M)=2.792 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_051694 {REF} {Length: 2204} {TRANSSPLICED} {RNA1310_42392} {RNA815_12871} | |
4. | MligTC455_03172 | 25 | 0.52 | Mlig455_016132, Mlig455_036881 | Neo: - Age: Down-Up-Down |
0.966 | - | - | - | - | 0.966 | - | Mlig455_016132 {REF} {Length: 1316} {NoTransDecoderORF} {RNA1509_8439} {RNA1310_1034.2} {RNA815_62940} Mlig455_036881 {REF} {Length: 2951} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1} |
|
5. | MligTC455_24036 | 38 | 0.8 | Mlig455_033348 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_033348 {REF} {Length: 1827} {TRANSSPLICED} {Pfam: PAXIP1-associated-protein-1 C term PTIP binding protein [PF15364.8, score=19.1]} {RNA1509_59545} {RNA1310_63661} {RNA815_38848.2} | |
6. | MligTC455_24099 | 11 | 0.23 | Mlig455_007650 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_007650 {REF} {Length: 1423} {RNA1310_111576} {RNA815_14158.1} | |
7. | MligTC455_57505 | 8 | 0.16 | Mlig455_044679 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_044679 {REF} {Length: 278} {NoTransDecoderORF} | |
8. | MligTC455_44790 | 7 | 0.15 | Mlig455_018751 | Neo: - Age: - |
CALML3 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_018751 {REF} {Length: 683} {Pfam: EF-hand domain pair [PF13499.8, score=85.7]; EF hand [PF00036.34, score=83.4]; EF-hand domain [PF13405.8, score=66.3]; EF-hand domain pair [PF13833.8, score=65.1]; EF hand [PF13202.8, score=46.0]; EF-hand domain [PF14658.8, score=27.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.7]; Family of unknown function (DUF5580) [PF17743.3, score=18.9]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=90.5, Expect=2e-23]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=90.1, Expect=2e-23]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=84.0, Expect=3e-21]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=75.5, Expect=5e-18]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=77.4, Expect=1e-18]} {RNA1509_9648} {RNA1310_21302} {RNA815_28645} |
9. | MligTC455_09168 | 3 | 0.06 | Mlig455_066421 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_066421 {REF} {Length: 1402} {tRNA: Val(CAC),pseudo, score=36.2} {RNA1509_51520} {RNA1310_36812} {RNA815_27203} | |
10. | MligTC455_16093 | 33 | 0.69 | Mlig455_067277 | Neo: - Age: Down-Up-Up Region-enriched R4: 4.796/0.01059 |
CETN2 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_067277 {REF} {Length: 886} {Pfam: EF-hand domain pair [PF13499.8, score=36.2]; EF hand [PF00036.34, score=36.0]; EF-hand domain [PF13405.8, score=32.4]; EF-hand domain pair [PF13833.8, score=26.0]; EF hand [PF13202.8, score=19.4]} {Human: ENSG00000147400, CETN2, centrin 2, [Score=58.9, Expect=1e-10]; ENSG00000143933, CALM2, calmodulin 2, [Score=56.6, Expect=1e-09]; ENSG00000198668, CALM1, calmodulin 1, [Score=56.6, Expect=2e-10]; ENSG00000160014, CALM3, calmodulin 3, [Score=56.6, Expect=2e-10]} {Mouse: ENSMUSG00000050996, Cetn1, centrin 1, [Score=63.5, Expect=2e-12]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=58.5, Expect=6e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=58.9, Expect=2e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=58.5, Expect=4e-11]} {RNA1310_39411} {RNA815_27208} |
11. | MligTC455_18549 | 35 | 0.72 | Mlig455_003836 | Neo: - Age: Up-Down-Down |
0.962 | - | - | - | - | 0.962 | - | Mlig455_003836 {REF} {Length: 1990} {RNA1509_32165} {RNA1310_13450} {RNA815_5462.1} | |
12. | MligTC455_43942 | 388 | 8.09 | Mlig455_035015 | Neo: - Age: Up-Down-Down Region-enriched R7: 5.805/0.00000 |
OSBPL1A | 0.961 | - | - | - | - | 0.961 | - | Mlig455_035015 {REF} {Length: 2506} {Pfam: Oxysterol-binding protein [PF01237.20, score=389.2]} {Human: ENSG00000141447, OSBPL1A, oxysterol binding protein like 1A, [RH, Score=366, Expect=6e-117]} {Mouse: ENSMUSG00000044252, Osbpl1a, oxysterol binding protein-like 1A, [RH, Score=373, Expect=1e-119]} {Dmel: FBgn0034951, CG3860, [Score=360, Expect=2e-120]} {Celegans: WBGene00008832, obr-2, Oxysterol Binding protein (OSBP) Related, [Score=198, Expect=2e-58]} {Smed: dd_Smed_v6_12759_0_1, dd_Smed_v6_12759_0_1, [RH, Score=338, Expect=1e-111]} {RNA1509_33899, RNA1509_46266} {RNA1310_17186, RNA1509_33899, RNA1509_46266} {RNA1509_33899, RNA1509_46266, RNA815_22518} |
13. | MligTC455_17255 | 12 | 0.24 | Mlig455_013836 | Neo: - Age: Up-Down-Up |
0.96 | - | - | - | - | 0.960 | - | Mlig455_013836 {REF} {Length: 3587} {TRANSSPLICED} {RNA1509_17462, RNA1509_24953} {RNA1310_485.1, RNA1509_24953} {RNA1509_24953, RNA815_2772.1} | |
14. | MligTC455_33332 | 15 | 0.32 | Mlig455_050529 | Neo: - Age: - |
TLR4 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_050529 {REF} {Length: 5807} {Pfam: Leucine rich repeat [PF13855.8, score=88.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=65.7]; TIR domain [PF01582.22, score=26.4]; Leucine Rich Repeat [PF00560.35, score=23.4]; TIR domain [PF13676.8, score=21.7]} {Human: ENSG00000136869, TLR4, toll like receptor 4, [Score=83.2, Expect=1e-15]} {Mouse: ENSMUSG00000030600, Lrfn1, leucine rich repeat and fibronectin type III domain containing 1, [Score=72.0, Expect=2e-12]} {Dmel: FBgn0026760, Tehao, [Score=79.7, Expect=6e-15]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=53.1, Expect=8e-07]} {RNA1310_135658} {RNA815_11474} |
15. | MligTC455_09486 | 10 | 0.21 | Mlig455_037528, Mlig455_037602 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_037528 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_31954} {RNA815_39541} Mlig455_037602 {REF} {Length: 289} {NoTransDecoderORF} {RNA1310_31954} {RNA815_39541} |
|
16. | MligTC455_43644 | 59 | 1.24 | Mlig455_001464 | Neo: Int S/G2/M Age: - |
PMS2 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_001464 {REF} {Length: 5111} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=72.1]; MutL C terminal dimerisation domain [PF08676.13, score=63.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=21.4]} {Human: ENSG00000122512, PMS2, PMS1 homolog 2, mismatch repair system component, [RH, Score=312, Expect=1e-92]} {Mouse: ENSMUSG00000079109, Pms2, PMS1 homolog2, mismatch repair system component, [RH, Score=314, Expect=1e-93]} {Dmel: FBgn0011660, Pms2, [RH, Score=269, Expect=4e-77]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [RH, Score=245, Expect=2e-69]} {Smed: dd_Smed_v6_16760_0_2, dd_Smed_v6_16760_0_2, [RH, Score=260, Expect=2e-76]} {RNA1509_20911} {RNA1310_4642, RNA1509_20911} {RNA1509_20911, RNA815_7455} |
17. | MligTC455_47519 | 52 | 1.08 | Mlig455_024118 | Neo: - Age: - |
TTLL4 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_024118 {REF} {Length: 4644} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=278.5]; YheC/D like ATP-grasp [PF14398.8, score=32.8]} {Human: ENSG00000135912, TTLL4, tubulin tyrosine ligase like 4, [Score=397, Expect=7e-120]} {Mouse: ENSMUSG00000033257, Ttll4, tubulin tyrosine ligase-like family, member 4, [Score=374, Expect=9e-112]} {Dmel: FBgn0026147, CG16833, [Score=346, Expect=1e-104]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=259, Expect=3e-75]} {Smed: dd_Smed_v6_17034_0_1, dd_Smed_v6_17034_0_1, [Score=436, Expect=3e-135]} {RNA1509_26063} {RNA1310_2257, RNA1509_26063} {RNA1509_26063, RNA815_2812} |
18. | MligTC455_56052 | 4 | 0.08 | Mlig455_058287 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_058287 {REF} {Length: 64} {NoTransDecoderORF} | |
19. | MligTC455_05646 | 6 | 0.13 | Mlig455_013878 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_013878 {REF} {Length: 366} {NoTransDecoderORF} {RNA1509_33205} {RNA1310_69080} {RNA815_19175.1} | |
20. | MligTC455_18722 | 24 | 0.5 | Mlig455_018294 | Neo: Int S/G2/M Age: Up-Down-Down |
PLK2 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_018294 {REF} {Length: 3188} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=53.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=23.3]} {Human: ENSG00000145632, PLK2, polo like kinase 2, [Score=75.1, Expect=3e-15]; ENSG00000166851, PLK1, polo like kinase 1, [Score=73.2, Expect=1e-14]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [Score=77.0, Expect=4e-16]; ENSMUSG00000021701, Plk2, polo like kinase 2, [Score=74.7, Expect=3e-15]} {Dmel: FBgn0003124, polo, [Score=65.1, Expect=3e-12]} {Celegans: WBGene00004042, plk-1, Serine/threonine-protein kinase plk-1, [Score=62.8, Expect=2e-11]} {Smed: dd_Smed_v6_3838_0_1, dd_Smed_v6_3838_0_1, [Score=60.5, Expect=6e-11]} {RNA1509_35335} {RNA1310_29286} {RNA815_15815} |
21. | MligTC455_25077 | 91 | 1.89 | Mlig455_041895, Mlig455_041977 | Neo: - Age: Up-Down-Up |
0.957 | - | - | - | - | 0.957 | - | Mlig455_041895 {REF} {Length: 3255} {tRNA: Val(CAC),pseudo, score=24.7} {RNA1509_40878} {RNA1310_11170.1, RNA1509_40878} {RNA1509_40878, RNA815_18058.2} Mlig455_041977 {REF} {Length: 2618} {tRNA: Val(CAC),pseudo, score=25.5} {RNA1509_40878} {RNA1310_11170.1} {RNA815_18058.2} |
|
22. | MligTC455_25314 | 18 | 0.39 | Mlig455_004144, Mlig455_019456 | Neo: - Age: Down-Down-Up Region-enriched R4: 5.385/0.00156 |
MYRF | 0.957 | - | - | - | - | 0.957 | - | Mlig455_004144 {REF} {Length: 3239} {Pfam: NDT80 / PhoG like DNA-binding family [PF05224.14, score=61.0]; Myelin regulatory factor ICA domain [PF13887.8, score=56.4]; Chaperone of endosialidase [PF13884.8, score=26.5]} {Human: ENSG00000124920, MYRF, myelin regulatory factor, [Score=243, Expect=3e-66]} {Mouse: ENSMUSG00000036098, Myrf, myelin regulatory factor, [Score=238, Expect=1e-64]} {Dmel: FBgn0034985, CG3328, [Score=234, Expect=2e-63]} {Celegans: WBGene00004134, myrf-1, Myelin regulatory factor related, [RH, Score=164, Expect=3e-41]} {RNA1509_8962} {RNA1310_4590.2, RNA1509_8962} {RNA1509_8962, RNA815_1404} Mlig455_019456 {REF} {Length: 3217} {Pfam: NDT80 / PhoG like DNA-binding family [PF05224.14, score=61.0]; Myelin regulatory factor ICA domain [PF13887.8, score=56.4]; Chaperone of endosialidase [PF13884.8, score=26.5]} {Human: ENSG00000124920, MYRF, myelin regulatory factor, [Score=243, Expect=3e-66]} {Mouse: ENSMUSG00000036098, Myrf, myelin regulatory factor, [Score=238, Expect=1e-64]} {Dmel: FBgn0034985, CG3328, [Score=234, Expect=2e-63]} {Celegans: WBGene00004134, myrf-1, Myelin regulatory factor related, [RH, Score=164, Expect=2e-41]} {RNA1509_8962} {RNA1310_4590.2} {RNA815_1404} |
23. | MligTC455_01792 | 9 | 0.19 | Mlig455_012711 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_012711 {REF} {Length: 590} {NoTransDecoderORF} | |
24. | MligTC455_03444 | 4 | 0.08 | Mlig455_042385 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_042385 {REF} {Length: 2176} {RNA1509_35100} {RNA1310_18231} {RNA815_38824} | |
25. | MligTC455_09515 | 6 | 0.12 | Mlig455_021192 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_021192 {REF} {Length: 351} {RNA1310_132407} | |
26. | MligTC455_57427 | 3 | 0.05 | Mlig455_044620 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_044620 {REF} {Length: 323} {NoTransDecoderORF} | |
27. | MligTC455_52465 | 414 | 8.63 | Mlig455_001618 | Neo: - Age: - Region-enriched R2: 1.980/0.03235 |
BAG1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_001618 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=38.5]; Ubiquitin-like domain [PF18037.3, score=26.6]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=20.9]} {Human: ENSG00000107262, BAG1, BCL2 associated athanogene 1, [RH, Score=81.6, Expect=8e-19]} {Mouse: ENSMUSG00000028416, Bag1, BCL2-associated athanogene 1, [RH, Score=74.3, Expect=3e-16]} {RNA1509_15630} {RNA1310_15366, RNA1509_15630} {RNA1509_15630, RNA815_9266.1} |
28. | MligTC455_11146 | 70 | 1.46 | Mlig455_068743 | Neo: - Age: Down-Up-Down |
C11orf65 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_068743 {REF} {Length: 1750} {Human: ENSG00000166323, C11orf65, chromosome 11 open reading frame 65, [RH, Score=226, Expect=4e-72]} {Mouse: ENSMUSG00000005131, 4930550C14Rik, RIKEN cDNA 4930550C14 gene, [RH, Score=214, Expect=2e-67]} {Smed: dd_Smed_v6_13591_0_1, dd_Smed_v6_13591_0_1, [RH, Score=237, Expect=9e-77]} {RNA1310_22540.1} {RNA815_13464} |
29. | MligTC455_26289 | 103 | 2.15 | Mlig455_031915 | Neo: - Age: Up-Down-Down Region-enriched R2: 3.261/0.04331 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_031915 {REF} {Length: 3995} {Pfam: Elongation factor G C-terminus [PF00679.26, score=37.7]} {RNA1509_50100} {RNA1310_17404.1} {RNA815_5685.2} | |
30. | MligTC455_52237 | 15 | 0.32 | Mlig455_013491 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_013491 {REF} {Length: 1488} {NoTransDecoderORF} {RNA1509_50956} {RNA1310_27383} {RNA815_9852.1} | |
31. | MligTC455_12416 | 14 | 0.3 | Mlig455_043772 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_043772 {REF} {Length: 989} {RNA1310_14500.2} | |
32. | MligTC455_48298 | 55 | 1.14 | Mlig455_067985 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_067985 {REF} {Length: 1658} {TRANSSPLICED} {Pfam: Centrosomin N-terminal motif 1 [PF07989.13, score=19.1]} {RNA1509_50908} {RNA1310_7799.1} {RNA815_38707} | |
33. | MligTC455_54060 | 17 | 0.36 | Mlig455_052757 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_052757 {REF} {Length: 4715} {RNA1310_25388} {RNA815_43889} | |
34. | MligTC455_54260 | 652 | 13.57 | Mlig455_057377, Mlig455_057400 | Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 1.098/0.00802 |
SLC27A4 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_057377 {REF} {Length: 3622} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=241.1]; AMP-binding enzyme C-terminal domain [PF13193.8, score=30.1]} {Human: ENSG00000167114, SLC27A4, solute carrier family 27 member 4, [RH, Score=639, Expect=0.0]; ENSG00000130304, SLC27A1, solute carrier family 27 member 1, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000059316, Slc27a4, solute carrier family 27 (fatty acid transporter), member 4, [RH, Score=626, Expect=0.0]; ENSMUSG00000031808, Slc27a1, solute carrier family 27 (fatty acid transporter), member 1, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0267828, Fatp, Fatty acid (long chain) transport protein, [RH, Score=592, Expect=0.0]} {Celegans: WBGene00017012, acs-22, Fatty Acid CoA Synthetase family, [RH, Score=493, Expect=5e-167]} {Smed: dd_Smed_v6_4057_0_1, dd_Smed_v6_4057_0_1, [RH, Score=632, Expect=0.0]} {RNA1509_18148} {RNA1310_5176} {RNA815_3662} Mlig455_057400 {REF} {Length: 3622} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=241.1]; AMP-binding enzyme C-terminal domain [PF13193.8, score=30.1]} {Human: ENSG00000167114, SLC27A4, solute carrier family 27 member 4, [RH, Score=639, Expect=0.0]; ENSG00000130304, SLC27A1, solute carrier family 27 member 1, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000059316, Slc27a4, solute carrier family 27 (fatty acid transporter), member 4, [RH, Score=626, Expect=0.0]; ENSMUSG00000031808, Slc27a1, solute carrier family 27 (fatty acid transporter), member 1, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0267828, Fatp, Fatty acid (long chain) transport protein, [RH, Score=592, Expect=0.0]} {Celegans: WBGene00017012, acs-22, Fatty Acid CoA Synthetase family, [RH, Score=493, Expect=5e-167]} {Smed: dd_Smed_v6_4057_0_1, dd_Smed_v6_4057_0_1, [RH, Score=632, Expect=0.0]} {RNA1509_18148, RNA1509_36496, RNA1509_55612} {RNA1310_5176, RNA1509_36496, RNA1509_55612} {RNA1509_36496, RNA1509_55612, RNA815_3662} |
35. | MligTC455_11142 | 10 | 0.2 | Mlig455_041921 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_041921 {REF} {Length: 2053} {NoTransDecoderORF} {RNA1310_33225.1} {RNA815_38499} | |
36. | MligTC455_22415 | 512 | 10.67 | Mlig455_008652, Mlig455_069418 | Neo: - Age: - |
RAB1A, RAB1B | 0.95 | - | - | - | - | 0.950 | - | Mlig455_008652 {REF} {Length: 6906} {Pfam: Ras family [PF00071.24, score=587.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=389.6]; ADP-ribosylation factor family [PF00025.23, score=200.9]; 50S ribosome-binding GTPase [PF01926.25, score=108.0]; RsgA GTPase [PF03193.18, score=66.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=63.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=52.7]; AAA domain [PF13401.8, score=51.9]; AAA ATPase domain [PF13191.8, score=51.0]; Bacterial TniB protein [PF05621.13, score=45.5]; NACHT domain [PF05729.14, score=44.6]; P-loop containing dynein motor region [PF12775.9, score=42.5]; P-loop containing region of AAA domain [PF13555.8, score=42.0]; MCM P-loop domain [PF00493.25, score=41.8]; ABC transporter [PF00005.29, score=40.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=39.2]; Caspase recruitment domain [PF00619.23, score=36.1]; AAA domain [PF13671.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=32.7]; Protein of unknown function (DUF815) [PF05673.15, score=30.6]; Septin [PF00735.20, score=30.3]; AAA domain [PF13479.8, score=30.1]; G-protein alpha subunit [PF00503.22, score=29.2]; RNA helicase [PF00910.24, score=28.1]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.5]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=23.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.1]; Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=21.9]; AAA domain [PF13173.8, score=20.0]; Interferon-inducible GTPase (IIGP) [PF05049.15, score=19.8]; AAA domain [PF13238.8, score=19.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=18.6]; Family of unknown function (DUF5838) [PF19156.2, score=18.5]} {Human: ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=161, Expect=2e-44]; ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=160, Expect=4e-44]; ENSG00000143545, RAB13, RAB13, member RAS oncogene family, [Score=155, Expect=4e-42]; ENSG00000285641, AL358472.6, novel protein, [Score=155, Expect=4e-42]; ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=153, Expect=1e-41]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=162, Expect=6e-45]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=160, Expect=3e-44]} {Dmel: FBgn0285937, Rab1, [Score=163, Expect=3e-45]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=160, Expect=2e-44]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=160, Expect=1e-44]} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1310_2946, RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043, RNA815_567} Mlig455_069418 {REF} {Length: 6098} {Pfam: Ras family [PF00071.24, score=148.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.4]; ADP-ribosylation factor family [PF00025.23, score=63.8]; Caspase recruitment domain [PF00619.23, score=36.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.2]; Bacterial TniB protein [PF05621.13, score=18.7]} {Human: ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=155, Expect=2e-42]; ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=155, Expect=1e-42]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=156, Expect=6e-43]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=154, Expect=2e-42]} {Dmel: FBgn0285937, Rab1, [Score=154, Expect=2e-42]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=149, Expect=6e-41]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=148, Expect=1e-40]} {RNA1509_44043} {RNA1310_6196} {RNA815_567} |
37. | MligTC455_45776 | 15 | 0.31 | Mlig455_038488 | Neo: - Age: Up-Down-Up |
RTL1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_038488 {REF} {Length: 4548} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.9]; Integrase zinc binding domain [PF17921.3, score=67.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.3]; Integrase core domain [PF00665.28, score=46.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.4]; Zinc knuckle [PF00098.25, score=22.7]; Aspartyl protease [PF09668.12, score=21.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=76.3, Expect=4e-13]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=69.3, Expect=4e-11]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=69.3, Expect=4e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=289, Expect=3e-81]} {RNA1310_22154.1} {RNA815_10995} |