Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_26289 | 103 | 2.15 | Mlig455_031915 | Neo: - Age: Up-Down-Down Region-enriched R2: 3.261/0.04331 |
Mlig455_031915 {REF} {Length: 3995} {Pfam: Elongation factor G C-terminus [PF00679.26, score=37.7]} {RNA1509_50100} {RNA1310_17404.1} {RNA815_5685.2} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.583 | 2 | 0.32831 | 0.97533 | |
RegionR2 | 3.261 | 2 | 0.00273 | 0.04331 | |
RegionR3 | -0.4 | 2 | 0.59463 | 1.00000 | |
RegionR4 | -3.031 | 2 | 0.01082 | 0.06475 | |
RegionR5 | -1.204 | 2 | 0.03166 | 0.13489 | |
RegionR6 | -0.665 | 2 | 0.33842 | 0.92570 | |
RegionR7 | 2.122 | 2 | 0.03712 | 0.36811 | |
RegionR8 | 1.499 | 2 | 0.27759 | 0.90251 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 0.499 | 2 | 0.91992 | 1.00000 | |
RegenerationR2 | 1.266 | 2 | 0.17140 | 0.61045 | |
RegenerationR3 | 2.345 | 2 | 0.02142 | 0.26587 | |
RegenerationR4 | 2.346 | 2 | 0.02805 | 0.26906 | |
RegenerationR5 | 2.252 | 2 | 0.00620 | 0.14360 | |
RegenerationR6 | 2.312 | 2 | 0.05352 | 0.28987 | |
RegenerationBL | -2.49 | 2 | 0.40202 | 0.77095 | |
RegenerationTP | -0.014 | 2 | 0.89987 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_26289 | 103 | 2.15 | Mlig455_031915 | Neo: - Age: Up-Down-Down Region-enriched R2: 3.261/0.04331 |
4 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | Mlig455_031915 {REF} {Length: 3995} {Pfam: Elongation factor G C-terminus [PF00679.26, score=37.7]} {RNA1509_50100} {RNA1310_17404.1} {RNA815_5685.2} | |
2. | MligTC455_37365 | 43 | 0.9 | Mlig455_018623 | Neo: - Age: logFC(26M/2M)=1.793 |
1.707 | - | - | - | - | 0.959 | 0.748 | Mlig455_018623 {REF} {Length: 776} {NoTransDecoderORF} {RNA1509_6435} {RNA1310_5963} {RNA815_1798.1} | |
3. | MligTC455_33721 | 238 | 4.96 | Mlig455_023625 | Neo: - Age: - |
INPP4A | 0.971 | - | - | - | - | 0.971 | - | Mlig455_023625 {REF} {Length: 3731} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=23.2]} {Human: ENSG00000040933, INPP4A, inositol polyphosphate-4-phosphatase type I A, [RH, Score=160, Expect=9e-40]; ENSG00000109452, INPP4B, inositol polyphosphate-4-phosphatase type II B, [RH, Score=154, Expect=7e-38]} {Mouse: ENSMUSG00000026113, Inpp4a, inositol polyphosphate-4-phosphatase, type I, [RH, Score=160, Expect=6e-40]; ENSMUSG00000037940, Inpp4b, inositol polyphosphate-4-phosphatase, type II, [RH, Score=154, Expect=8e-38]} {Dmel: FBgn0259166, CG42271, [RH, Score=130, Expect=2e-30]} {Celegans: WBGene00010975, R01H10.7, Inositol polyphosphate-4-phosphatase, [RH, Score=99.4, Expect=6e-21]} {Smed: dd_Smed_v6_3999_0_1, dd_Smed_v6_3999_0_1, [RH, Score=273, Expect=1e-77]} {RNA1509_35733} {RNA1310_133.2} {RNA815_856} |
4. | MligTC455_25719 | 165 | 3.44 | Mlig455_004747 | Neo: - Age: - |
CHP1 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_004747 {REF} {Length: 2272} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.0]; EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=28.8]; EF hand [PF13202.8, score=22.3]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000187446, CHP1, calcineurin like EF-hand protein 1, [Score=122, Expect=2e-34]} {Mouse: ENSMUSG00000014077, Chp1, calcineurin-like EF hand protein 1, [RH, Score=123, Expect=5e-35]} {Dmel: FBgn0037358, elm, ethanol sensitive with low memory, [RH, Score=142, Expect=9e-43]} {Celegans: WBGene00014109, chpf-1, Calcineurin-like EF-Hand Protein Family member, [RH, Score=115, Expect=2e-32]} {Smed: dd_Smed_v6_1504_0_1, dd_Smed_v6_1504_0_1, [RH, Score=118, Expect=9e-34]} {RNA1509_12947} {RNA1310_50406} {RNA815_26406} |
5. | MligTC455_39738 | 74 | 1.54 | Mlig455_025353 | Neo: - Age: - |
TBC1D13 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_025353 {REF} {Length: 2893} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=88.5]} {Human: ENSG00000107021, TBC1D13, TBC1 domain family member 13, [Score=353, Expect=3e-119]} {Mouse: ENSMUSG00000039678, Tbc1d13, TBC1 domain family, member 13, [Score=355, Expect=3e-120]} {Dmel: FBgn0035916, GAPsec, GTPase activating protein, SECIS-dependent read-through, [Score=335, Expect=3e-112]} {Celegans: WBGene00009726, tbc-13, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=272, Expect=3e-87]} {Smed: dd_Smed_v6_7072_0_2, dd_Smed_v6_7072_0_2, [Score=291, Expect=2e-95]} {RNA1509_17488} {RNA1310_19061.1} {RNA815_14426} |
6. | MligTC455_14596 | 9 | 0.19 | Mlig455_063884 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_063884 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_138760} | |
7. | MligTC455_04428 | 655 | 13.66 | Mlig455_071088 | Neo: - Age: - Region-enriched R4: 3.160/0.00859 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_071088 {REF} {Length: 272} {NoTransDecoderORF} {RNA1509_284} {RNA1310_24413} {RNA815_6153} | |
8. | MligTC455_13958 | 157 | 3.27 | Mlig455_003609 | Neo: - Age: - Region-enriched R3: 2.933/0.00923 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_003609 {REF} {Length: 1179} {NoTransDecoderORF} {RNA1509_57187} {RNA1310_83315, RNA1509_57187} {RNA1509_57187, RNA815_54608} | |
9. | MligTC455_18722 | 24 | 0.5 | Mlig455_018294 | Neo: Int S/G2/M Age: Up-Down-Down |
PLK2 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_018294 {REF} {Length: 3188} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=53.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=23.3]} {Human: ENSG00000145632, PLK2, polo like kinase 2, [Score=75.1, Expect=3e-15]; ENSG00000166851, PLK1, polo like kinase 1, [Score=73.2, Expect=1e-14]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [Score=77.0, Expect=4e-16]; ENSMUSG00000021701, Plk2, polo like kinase 2, [Score=74.7, Expect=3e-15]} {Dmel: FBgn0003124, polo, [Score=65.1, Expect=3e-12]} {Celegans: WBGene00004042, plk-1, Serine/threonine-protein kinase plk-1, [Score=62.8, Expect=2e-11]} {Smed: dd_Smed_v6_3838_0_1, dd_Smed_v6_3838_0_1, [Score=60.5, Expect=6e-11]} {RNA1509_35335} {RNA1310_29286} {RNA815_15815} |
10. | MligTC455_21429 | 18 | 0.37 | Mlig455_049174 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_049174 {REF} {Length: 2613} {NoTransDecoderORF} {RNA1310_50381} {RNA815_39191} | |
11. | MligTC455_25314 | 18 | 0.39 | Mlig455_004144, Mlig455_019456 | Neo: - Age: Down-Down-Up Region-enriched R4: 5.385/0.00156 |
MYRF | 0.959 | - | - | - | - | 0.959 | - | Mlig455_004144 {REF} {Length: 3239} {Pfam: NDT80 / PhoG like DNA-binding family [PF05224.14, score=61.0]; Myelin regulatory factor ICA domain [PF13887.8, score=56.4]; Chaperone of endosialidase [PF13884.8, score=26.5]} {Human: ENSG00000124920, MYRF, myelin regulatory factor, [Score=243, Expect=3e-66]} {Mouse: ENSMUSG00000036098, Myrf, myelin regulatory factor, [Score=238, Expect=1e-64]} {Dmel: FBgn0034985, CG3328, [Score=234, Expect=2e-63]} {Celegans: WBGene00004134, myrf-1, Myelin regulatory factor related, [RH, Score=164, Expect=3e-41]} {RNA1509_8962} {RNA1310_4590.2, RNA1509_8962} {RNA1509_8962, RNA815_1404} Mlig455_019456 {REF} {Length: 3217} {Pfam: NDT80 / PhoG like DNA-binding family [PF05224.14, score=61.0]; Myelin regulatory factor ICA domain [PF13887.8, score=56.4]; Chaperone of endosialidase [PF13884.8, score=26.5]} {Human: ENSG00000124920, MYRF, myelin regulatory factor, [Score=243, Expect=3e-66]} {Mouse: ENSMUSG00000036098, Myrf, myelin regulatory factor, [Score=238, Expect=1e-64]} {Dmel: FBgn0034985, CG3328, [Score=234, Expect=2e-63]} {Celegans: WBGene00004134, myrf-1, Myelin regulatory factor related, [RH, Score=164, Expect=2e-41]} {RNA1509_8962} {RNA1310_4590.2} {RNA815_1404} |
12. | MligTC455_49644 | 38 | 0.79 | Mlig455_027199 | Neo: Int S/G2/M Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_027199 {REF} {Length: 2902} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.2]} {RNA1509_25402} {RNA1310_45818.1} {RNA815_14744.1} | |
13. | MligTC455_50188 | 79 | 1.65 | Mlig455_018488 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_018488 {REF} {Length: 951} {TRANSSPLICED} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=25.1]} {RNA1509_41946} {RNA1310_34100, RNA1509_41946} {RNA1509_41946, RNA815_16514} | |
14. | MligTC455_54157 | 234 | 4.88 | Mlig455_058424 | Neo: - Age: - |
PPP1R36 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_058424 {REF} {Length: 2441} {Pfam: Protein phosphatase 1 inhibitor [PF14895.8, score=139.0]} {Human: ENSG00000165807, PPP1R36, protein phosphatase 1 regulatory subunit 36, [RH, Score=191, Expect=1e-55]} {Mouse: ENSMUSG00000052221, Ppp1r36, protein phosphatase 1, regulatory subunit 36, [RH, Score=167, Expect=5e-47]} {RNA1509_6292} {RNA1310_2911.1} {RNA815_5971.1} |
15. | MligTC455_57696 | 4 | 0.08 | Mlig455_019716 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_019716 {REF} {Length: 85} {NoTransDecoderORF} | |
16. | MligTC455_38792 | 39 | 0.81 | Mlig455_018807, Mlig455_029868 | Neo: - Age: - |
RPN1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_018807 {REF} {Length: 2985} {Pfam: Ribophorin I [PF04597.16, score=429.0]; DNA repair REX1-B [PF14966.8, score=27.1]} {Human: ENSG00000163902, RPN1, ribophorin I, [RH, Score=521, Expect=3e-179]} {Mouse: ENSMUSG00000030062, Rpn1, ribophorin I, [RH, Score=521, Expect=1e-179]} {Dmel: FBgn0053303, CG33303, [RH, Score=397, Expect=3e-133]} {Celegans: WBGene00020683, ribo-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1, [RH, Score=350, Expect=3e-113]} {Smed: dd_Smed_v6_853_0_1, dd_Smed_v6_853_0_1, [RH, Score=572, Expect=0.0]} {RNA1509_1279} {RNA1310_5963} {RNA815_1798.1} Mlig455_029868 {REF} {Length: 355} {RNA1509_21181} {RNA1310_15650.2} {RNA815_22833} |
17. | MligTC455_26290 | 227 | 4.72 | Mlig455_032016 | Neo: Int S/G2/M Age: - |
GFM2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_032016 {REF} {Length: 1741} {Pfam: Elongation factor G C-terminus [PF00679.26, score=30.8]; Elongation factor G, domain IV [PF03764.20, score=23.4]} {Human: ENSG00000164347, GFM2, G elongation factor mitochondrial 2, [Score=53.5, Expect=2e-07]} {RNA1509_29692} {RNA1310_9416.1} {RNA815_5290} |
18. | MligTC455_52465 | 414 | 8.63 | Mlig455_001618 | Neo: - Age: - Region-enriched R2: 1.980/0.03235 |
BAG1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_001618 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=38.5]; Ubiquitin-like domain [PF18037.3, score=26.6]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=20.9]} {Human: ENSG00000107262, BAG1, BCL2 associated athanogene 1, [RH, Score=81.6, Expect=8e-19]} {Mouse: ENSMUSG00000028416, Bag1, BCL2-associated athanogene 1, [RH, Score=74.3, Expect=3e-16]} {RNA1509_15630} {RNA1310_15366, RNA1509_15630} {RNA1509_15630, RNA815_9266.1} |
19. | MligTC455_22408 | 69 | 1.43 | Mlig455_020360 | Neo: Int S/G2/M Age: Down-Up-Down |
MAN1B1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_020360 {REF} {Length: 3567} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=516.9]} {Human: ENSG00000177239, MAN1B1, mannosidase alpha class 1B member 1, [RH, Score=509, Expect=2e-173]} {Mouse: ENSMUSG00000036646, Man1b1, mannosidase, alpha, class 1B, member 1, [RH, Score=522, Expect=3e-179]} {Dmel: FBgn0039634, alpha-Man-Ib, alpha-Mannosidase class I b, [RH, Score=479, Expect=2e-162]} {Celegans: WBGene00020197, mans-3, alpha-1,2-Mannosidase, [RH, Score=454, Expect=3e-154]} {Smed: dd_Smed_v6_7032_0_1, dd_Smed_v6_7032_0_1, [RH, Score=514, Expect=3e-178]} {RNA1509_10584} {RNA1310_11173, RNA1509_10584} {RNA1509_10584, RNA815_9464} |
20. | MligTC455_26220 | 49 | 1.03 | Mlig455_032627 | Neo: Irradiation Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_032627 {REF} {Length: 4049} {TRANSSPLICED} {RNA1509_38431} {RNA1310_17439} {RNA815_9396} | |
21. | MligTC455_05589 | 5 | 0.1 | Mlig455_005329 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_005329 {REF} {Length: 983} {RNA1509_20735} {RNA1310_8770} {RNA815_4829.1} | |
22. | MligTC455_51513 | 348 | 7.25 | Mlig455_038556, Mlig455_053451 | Neo: - Age: - Region-enriched R5: 2.235/0.02381 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_038556 {REF} {Length: 2714} {TRANSSPLICED} {RNA1509_37154} {RNA1310_37300, RNA1509_37154} {RNA1509_37154, RNA815_23625} Mlig455_053451 {REF} {Length: 3007} {TRANSSPLICED} {RNA1509_37154} {RNA1310_37300} {RNA815_23625} |
|
23. | MligTC455_29035 | 24 | 0.49 | Mlig455_058056 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_058056 {REF} {Length: 5321} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=142.7]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=372, Expect=2e-107]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} |