M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_33332

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33332 15 0.32 Mlig455_050529

Neo: -

Age: -

 TLR4 Mlig455_050529 {REF} {Length: 5807} {Pfam: Leucine rich repeat [PF13855.8, score=88.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=65.7]; TIR domain [PF01582.22, score=26.4]; Leucine Rich Repeat [PF00560.35, score=23.4]; TIR domain [PF13676.8, score=21.7]} {Human: ENSG00000136869, TLR4, toll like receptor 4, [Score=83.2, Expect=1e-15]} {Mouse: ENSMUSG00000030600, Lrfn1, leucine rich repeat and fibronectin type III domain containing 1, [Score=72.0, Expect=2e-12]} {Dmel: FBgn0026760, Tehao, [Score=79.7, Expect=6e-15]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=53.1, Expect=8e-07]} {RNA1310_135658} {RNA815_11474}

Cumulative graph for MligTC455_33332

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.737 0.695 1.00000 1.00000
RegionR2 3.727 0.695 0.07699 0.33925
RegionR3 1.276 0.695 0.30409 0.84572
RegionR4 -2.818 0.695 1.00000 1.00000
RegionR5 -2.268 0.695 0.99953 1.00000
RegionR6 -1.403 0.695 0.99961 1.00000
RegionR7 3.542 0.695 0.05244 0.44055
RegionR8 -0.318 0.695 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.179 0.695 1.00000 1.00000
RegenerationR2 0.568 0.695 0.35824 0.78796
RegenerationR3 1.32 0.695 0.20980 0.64593
RegenerationR4 1.596 0.695 1.00000 1.00000
RegenerationR5 4.282 0.695 0.04853 0.35698
RegenerationR6 5.208 0.695 0.03477 0.23361
RegenerationBL 0.256 0.695 0.66838 1.00000
RegenerationTP -1.07 0.695 1.00000 1.00000


Genes with expression patterns similar to MligTC455_33332

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33332 15 0.32 Mlig455_050529

Neo: -

Age: -

 TLR4 1 - - - - 1.000 - Mlig455_050529 {REF} {Length: 5807} {Pfam: Leucine rich repeat [PF13855.8, score=88.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=65.7]; TIR domain [PF01582.22, score=26.4]; Leucine Rich Repeat [PF00560.35, score=23.4]; TIR domain [PF13676.8, score=21.7]} {Human: ENSG00000136869, TLR4, toll like receptor 4, [Score=83.2, Expect=1e-15]} {Mouse: ENSMUSG00000030600, Lrfn1, leucine rich repeat and fibronectin type III domain containing 1, [Score=72.0, Expect=2e-12]} {Dmel: FBgn0026760, Tehao, [Score=79.7, Expect=6e-15]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=53.1, Expect=8e-07]} {RNA1310_135658} {RNA815_11474}
2. MligTC455_05646 6 0.13 Mlig455_013878

Neo: -

Age: -

 0.999 - - - - 0.999 - Mlig455_013878 {REF} {Length: 366} {NoTransDecoderORF} {RNA1509_33205} {RNA1310_69080} {RNA815_19175.1}
3. MligTC455_16093 33 0.69 Mlig455_067277

Neo: -

Age: Down-Up-Up

Region-enriched R4: 4.796/0.01059

 CETN2 0.998 - - - - 0.998 - Mlig455_067277 {REF} {Length: 886} {Pfam: EF-hand domain pair [PF13499.8, score=36.2]; EF hand [PF00036.34, score=36.0]; EF-hand domain [PF13405.8, score=32.4]; EF-hand domain pair [PF13833.8, score=26.0]; EF hand [PF13202.8, score=19.4]} {Human: ENSG00000147400, CETN2, centrin 2, [Score=58.9, Expect=1e-10]; ENSG00000143933, CALM2, calmodulin 2, [Score=56.6, Expect=1e-09]; ENSG00000198668, CALM1, calmodulin 1, [Score=56.6, Expect=2e-10]; ENSG00000160014, CALM3, calmodulin 3, [Score=56.6, Expect=2e-10]} {Mouse: ENSMUSG00000050996, Cetn1, centrin 1, [Score=63.5, Expect=2e-12]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=58.5, Expect=6e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=58.9, Expect=2e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=58.5, Expect=4e-11]} {RNA1310_39411} {RNA815_27208}
4. MligTC455_57505 8 0.16 Mlig455_044679

Neo: -

Age: -

 0.998 - - - - 0.998 - Mlig455_044679 {REF} {Length: 278} {NoTransDecoderORF}
5. MligTC455_24099 11 0.23 Mlig455_007650

Neo: -

Age: -

 0.997 - - - - 0.997 - Mlig455_007650 {REF} {Length: 1423} {RNA1310_111576} {RNA815_14158.1}
6. MligTC455_09168 3 0.06 Mlig455_066421

Neo: -

Age: -

 0.996 - - - - 0.996 - Mlig455_066421 {REF} {Length: 1402} {tRNA: Val(CAC),pseudo, score=36.2} {RNA1509_51520} {RNA1310_36812} {RNA815_27203}
7. MligTC455_44790 7 0.15 Mlig455_018751

Neo: -

Age: -

 CALML3 0.996 - - - - 0.996 - Mlig455_018751 {REF} {Length: 683} {Pfam: EF-hand domain pair [PF13499.8, score=85.7]; EF hand [PF00036.34, score=83.4]; EF-hand domain [PF13405.8, score=66.3]; EF-hand domain pair [PF13833.8, score=65.1]; EF hand [PF13202.8, score=46.0]; EF-hand domain [PF14658.8, score=27.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.7]; Family of unknown function (DUF5580) [PF17743.3, score=18.9]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=90.5, Expect=2e-23]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=90.1, Expect=2e-23]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=84.0, Expect=3e-21]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=75.5, Expect=5e-18]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=77.4, Expect=1e-18]} {RNA1509_9648} {RNA1310_21302} {RNA815_28645}
8. MligTC455_09486 10 0.21 Mlig455_037528, Mlig455_037602

Neo: -

Age: -

 0.994 - - - - 0.994 -

Mlig455_037528 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_31954} {RNA815_39541}

Mlig455_037602 {REF} {Length: 289} {NoTransDecoderORF} {RNA1310_31954} {RNA815_39541}
9. MligTC455_47519 52 1.08 Mlig455_024118

Neo: -

Age: -

 TTLL4 0.994 - - - - 0.994 - Mlig455_024118 {REF} {Length: 4644} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=278.5]; YheC/D like ATP-grasp [PF14398.8, score=32.8]} {Human: ENSG00000135912, TTLL4, tubulin tyrosine ligase like 4, [Score=397, Expect=7e-120]} {Mouse: ENSMUSG00000033257, Ttll4, tubulin tyrosine ligase-like family, member 4, [Score=374, Expect=9e-112]} {Dmel: FBgn0026147, CG16833, [Score=346, Expect=1e-104]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=259, Expect=3e-75]} {Smed: dd_Smed_v6_17034_0_1, dd_Smed_v6_17034_0_1, [Score=436, Expect=3e-135]} {RNA1509_26063} {RNA1310_2257, RNA1509_26063} {RNA1509_26063, RNA815_2812}
10. MligTC455_56052 4 0.08 Mlig455_058287

Neo: -

Age: -

 0.994 - - - - 0.994 - Mlig455_058287 {REF} {Length: 64} {NoTransDecoderORF}
11. MligTC455_00615 4 0.09 Mlig455_044144

Neo: -

Age: -

 0.992 - - - - 0.992 - Mlig455_044144 {REF} {Length: 198} {TRANSSPLICED} {NoTransDecoderORF}
12. MligTC455_11142 10 0.2 Mlig455_041921

Neo: -

Age: -

 0.989 - - - - 0.989 - Mlig455_041921 {REF} {Length: 2053} {NoTransDecoderORF} {RNA1310_33225.1} {RNA815_38499}
13. MligTC455_12416 14 0.3 Mlig455_043772

Neo: -

Age: -

 0.989 - - - - 0.989 - Mlig455_043772 {REF} {Length: 989} {RNA1310_14500.2}
14. MligTC455_26220 49 1.03 Mlig455_032627

Neo: Irradiation

Age: -

 0.989 - - - - 0.989 - Mlig455_032627 {REF} {Length: 4049} {TRANSSPLICED} {RNA1509_38431} {RNA1310_17439} {RNA815_9396}
15. MligTC455_57696 4 0.08 Mlig455_019716

Neo: -

Age: -

 0.988 - - - - 0.988 - Mlig455_019716 {REF} {Length: 85} {NoTransDecoderORF}
16. MligTC455_01150 7 0.15 Mlig455_001840

Neo: Germline

Age: -

 0.985 - - - - 0.985 - Mlig455_001840 {REF} {Length: 490} {NoTransDecoderORF}
17. MligTC455_46909 7 0.15 Mlig455_063131

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_063131 {REF} {Length: 237} {NoTransDecoderORF} {RNA1509_42663} {RNA1310_3335.1} {RNA815_29726}
18. MligTC455_12423 7 0.14 Mlig455_067821

Neo: -

Age: -

 0.983 - - - - 0.983 - Mlig455_067821 {REF} {Length: 422} {NoTransDecoderORF} {RNA1509_20962} {RNA1310_1856.3} {RNA815_6906.1}
19. MligTC455_52237 15 0.32 Mlig455_013491

Neo: -

Age: -

 0.983 - - - - 0.983 - Mlig455_013491 {REF} {Length: 1488} {NoTransDecoderORF} {RNA1509_50956} {RNA1310_27383} {RNA815_9852.1}
20. MligTC455_03444 4 0.08 Mlig455_042385

Neo: -

Age: -

 0.982 - - - - 0.982 - Mlig455_042385 {REF} {Length: 2176} {RNA1509_35100} {RNA1310_18231} {RNA815_38824}
21. MligTC455_57427 3 0.05 Mlig455_044620

Neo: -

Age: -

 0.982 - - - - 0.982 - Mlig455_044620 {REF} {Length: 323} {NoTransDecoderORF}
22. MligTC455_43562 6 0.13 Mlig455_053653

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_053653 {REF} {Length: 45} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51209} {RNA1310_41053}
23. MligTC455_43644 59 1.24 Mlig455_001464

Neo: Int S/G2/M

Age: -

 PMS2 0.981 - - - - 0.981 - Mlig455_001464 {REF} {Length: 5111} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=72.1]; MutL C terminal dimerisation domain [PF08676.13, score=63.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=21.4]} {Human: ENSG00000122512, PMS2, PMS1 homolog 2, mismatch repair system component, [RH, Score=312, Expect=1e-92]} {Mouse: ENSMUSG00000079109, Pms2, PMS1 homolog2, mismatch repair system component, [RH, Score=314, Expect=1e-93]} {Dmel: FBgn0011660, Pms2, [RH, Score=269, Expect=4e-77]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [RH, Score=245, Expect=2e-69]} {Smed: dd_Smed_v6_16760_0_2, dd_Smed_v6_16760_0_2, [RH, Score=260, Expect=2e-76]} {RNA1509_20911} {RNA1310_4642, RNA1509_20911} {RNA1509_20911, RNA815_7455}
24. MligTC455_50039 12 0.24 Mlig455_051694

Neo: -

Age: logFC(26M/2M)=2.792

 0.98 - - - - 0.980 - Mlig455_051694 {REF} {Length: 2204} {TRANSSPLICED} {RNA1310_42392} {RNA815_12871}
25. MligTC455_48429 8 0.16 Mlig455_045168

Neo: -

Age: -

 ZMYM1 0.979 - - - - 0.979 - Mlig455_045168 {REF} {Length: 2215} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=43.2]} {Human: ENSG00000197056, ZMYM1, zinc finger MYM-type containing 1, [Score=66.6, Expect=2e-11]} {Mouse: ENSMUSG00000043872, Zmym1, zinc finger, MYM domain containing 1, [Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_17904_0_7, dd_Smed_v6_17904_0_7, [Score=69.7, Expect=2e-14]} {RNA1310_24239} {RNA815_58590}
26. MligTC455_18296 68 1.41 Mlig455_058144

Neo: -

Age: -

 FITM2 0.978 - - - - 0.978 - Mlig455_058144 {REF} {Length: 2857} {TRANSSPLICED} {Pfam: Inositol phospholipid synthesis and fat-storage-inducing TM [PF10261.11, score=73.1]} {Human: ENSG00000197296, FITM2, fat storage inducing transmembrane protein 2, [RH, Score=131, Expect=1e-35]} {Mouse: ENSMUSG00000048486, Fitm2, fat storage-inducing transmembrane protein 2, [RH, Score=130, Expect=2e-35]} {Dmel: FBgn0035586, Fitm, Fat storage inducing transmembrane protein, [RH, Score=155, Expect=4e-43]} {Smed: dd_Smed_v6_10388_0_1, dd_Smed_v6_10388_0_1, [RH, Score=224, Expect=2e-71]} {RNA1509_30611} {RNA1310_26356} {RNA815_17176}
27. MligTC455_08375 13 0.27 Mlig455_029564

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_029564 {REF} {Length: 647} {NoTransDecoderORF}
28. MligTC455_08902 7 0.15 Mlig455_017809

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_017809 {REF} {Length: 650} {NoTransDecoderORF} {RNA1310_44077.1}
29. MligTC455_08916 9 0.2 Mlig455_009151

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_009151 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_49412} {RNA815_40095}
30. MligTC455_18778 13 0.27 Mlig455_049126

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_049126 {REF} {Length: 424} {RNA1310_131459}
31. MligTC455_26942 8 0.16 Mlig455_014636, Mlig455_014715

Neo: -

Age: Up-Down-Up

 ANK2 0.975 - - - - 0.975 -

Mlig455_014636 {REF} {Length: 4273} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=146.2]; Ankyrin repeat [PF00023.32, score=113.5]; Ankyrin repeats (many copies) [PF13637.8, score=107.9]; Ankyrin repeat [PF13606.8, score=103.5]; Ankyrin repeats (many copies) [PF13857.8, score=81.5]; Mab-21 protein [PF03281.16, score=18.9]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=162, Expect=9e-40]; ENSG00000151150, ANK3, ankyrin 3, [Score=158, Expect=2e-38]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=159, Expect=7e-39]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=158, Expect=1e-38]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=160, Expect=9e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=176, Expect=1e-44]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=154, Expect=3e-39]} {RNA1509_19588} {RNA1310_2850.1} {RNA815_2885.2}

Mlig455_014715 {REF} {Length: 4965} {Pfam: Mab-21 protein [PF03281.16, score=20.4]} {RNA1509_19588} {RNA1310_2850.1} {RNA815_2885.2}
32. MligTC455_18491 8 0.17 Mlig455_064111

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_064111 {REF} {Length: 2875} {NoTransDecoderORF} {RNA1509_54153} {RNA1310_60879} {RNA815_57959}
33. MligTC455_22189 82 1.71 Mlig455_046570

Neo: Irradiation

Age: logFC(26M/2M)=-0.350

Region-enriched R5: 3.640/0.00155

 0.974 - - - - 0.974 - Mlig455_046570 {REF} {Length: 3148} {Pfam: CDC45-like protein [PF02724.16, score=33.0]; GRAM domain [PF02893.22, score=32.2]; Nop14-like family [PF04147.14, score=24.4]; Presenilin [PF01080.19, score=22.1]} {Dmel: FBgn0085423, CG34394, [Score=51.2, Expect=1e-06]} {RNA1509_54746} {RNA1310_29343} {RNA815_28931}
34. MligTC455_25648 207 4.31 Mlig455_032380

Neo: Int S/G2/M

Age: -

 0.974 - - - - 0.974 - Mlig455_032380 {REF} {Length: 2398} {RNA1310_62405.2} {RNA815_37381.1}
35. MligTC455_18160 199 4.14 Mlig455_005036, Mlig455_005076, Mlig455_005237

Neo: -

Age: logFC(26M/2M)=0.400

 MARCH7 0.973 - - - - 0.973 -

Mlig455_005036 {REF} {Length: 1948} {Pfam: RING-variant domain [PF12906.9, score=51.3]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=52.4, Expect=9e-08]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=52.8, Expect=6e-08]} {Dmel: FBgn0031474, CG2991, [Score=47.8, Expect=2e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=58.2, Expect=2e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=51.6, Expect=5e-08]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}

Mlig455_005076 {REF} {Length: 1947} {Pfam: RING-variant domain [PF12906.9, score=49.8]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=51.2, Expect=2e-07]} {Dmel: FBgn0031474, CG2991, [Score=46.6, Expect=4e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=57.4, Expect=4e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=52.0, Expect=4e-08]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}

Mlig455_005237 {REF} {Length: 1944} {Pfam: RING-variant domain [PF12906.9, score=50.7]} {Human: ENSG00000136536, MARCH7, membrane associated ring-CH-type finger 7, [Score=51.2, Expect=3e-07]} {Mouse: ENSMUSG00000026977, March7, membrane-associated ring finger (C3HC4) 7, [Score=51.2, Expect=2e-07]} {Dmel: FBgn0031474, CG2991, [Score=47.0, Expect=3e-06]} {Celegans: WBGene00016903, marc-4, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=57.0, Expect=5e-10]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [Score=50.1, Expect=1e-07]} {RNA1509_48933} {RNA1310_49370} {RNA815_36043}
36. MligTC455_18624 4 0.09 Mlig455_018330

Neo: -

Age: Down-Up-Down

 SPATS1 0.972 - - - - 0.972 - Mlig455_018330 {REF} {Length: 1361} {TRANSSPLICED} {Pfam: Spermatogenesis-associated serine-rich protein 1 [PF15160.8, score=70.7]} {Human: ENSG00000249481, SPATS1, spermatogenesis associated serine rich 1, [RH, Score=73.9, Expect=1e-14]} {Mouse: ENSMUSG00000023935, Spats1, spermatogenesis associated, serine-rich 1, [RH, Score=72.8, Expect=3e-14]} {Smed: dd_Smed_v6_8305_0_1, dd_Smed_v6_8305_0_1, [RH, Score=211, Expect=3e-68]} {RNA1509_15481} {RNA1310_26555} {RNA815_13979}
37. MligTC455_25537 267 5.55 Mlig455_004658

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_004658 {REF} {Length: 3956} {TRANSSPLICED} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=54.0]; Gamma tubulin complex component N-terminal [PF17681.3, score=19.7]} {Mouse: ENSMUSG00000033790, Tubgcp5, tubulin, gamma complex associated protein 5, [Score=57.4, Expect=8e-08]} {RNA1509_14096, RNA1509_41301} {RNA1310_22726, RNA1509_41301} {RNA1509_41301, RNA815_17783}
38. MligTC455_35634 13 0.28 Mlig455_051233

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_051233 {REF} {Length: 1161} {RNA1509_58333} {RNA1310_80769} {RNA815_41251}
39. MligTC455_37891 86 1.8 Mlig455_006537, Mlig455_056415

Neo: -

Age: -

 0.972 - - - - 0.972 -

Mlig455_006537 {REF} {Length: 521} {RNA1509_28941} {RNA1310_53075.1} {RNA815_47011}

Mlig455_056415 {REF} {Length: 334} {NoTransDecoderORF} {RNA1509_28941} {RNA1310_53075.1} {RNA815_58401}
40. MligTC455_43942 388 8.09 Mlig455_035015

Neo: -

Age: Up-Down-Down

Region-enriched R7: 5.805/0.00000
Region-enriched R8: 4.159/0.00114

 OSBPL1A 0.971 - - - - 0.971 - Mlig455_035015 {REF} {Length: 2506} {Pfam: Oxysterol-binding protein [PF01237.20, score=389.2]} {Human: ENSG00000141447, OSBPL1A, oxysterol binding protein like 1A, [RH, Score=366, Expect=6e-117]} {Mouse: ENSMUSG00000044252, Osbpl1a, oxysterol binding protein-like 1A, [RH, Score=373, Expect=1e-119]} {Dmel: FBgn0034951, CG3860, [Score=360, Expect=2e-120]} {Celegans: WBGene00008832, obr-2, Oxysterol Binding protein (OSBP) Related, [Score=198, Expect=2e-58]} {Smed: dd_Smed_v6_12759_0_1, dd_Smed_v6_12759_0_1, [RH, Score=338, Expect=1e-111]} {RNA1509_33899, RNA1509_46266} {RNA1310_17186, RNA1509_33899, RNA1509_46266} {RNA1509_33899, RNA1509_46266, RNA815_22518}
41. MligTC455_22408 69 1.43 Mlig455_020360

Neo: Int S/G2/M

Age: Down-Up-Down

 MAN1B1 0.97 - - - - 0.970 - Mlig455_020360 {REF} {Length: 3567} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=516.9]} {Human: ENSG00000177239, MAN1B1, mannosidase alpha class 1B member 1, [RH, Score=509, Expect=2e-173]} {Mouse: ENSMUSG00000036646, Man1b1, mannosidase, alpha, class 1B, member 1, [RH, Score=522, Expect=3e-179]} {Dmel: FBgn0039634, alpha-Man-Ib, alpha-Mannosidase class I b, [RH, Score=479, Expect=2e-162]} {Celegans: WBGene00020197, mans-3, alpha-1,2-Mannosidase, [RH, Score=454, Expect=3e-154]} {Smed: dd_Smed_v6_7032_0_1, dd_Smed_v6_7032_0_1, [RH, Score=514, Expect=3e-178]} {RNA1509_10584} {RNA1310_11173, RNA1509_10584} {RNA1509_10584, RNA815_9464}
42. MligTC455_50589 29 0.61 Mlig455_010626, Mlig455_010716

Neo: -

Age: Down-Up-Down

 0.97 - - - - 0.970 -

Mlig455_010626 {REF} {Length: 2021} {Pfam: Tctex-1 family [PF03645.15, score=27.5]} {RNA1310_36440}

Mlig455_010716 {REF} {Length: 2038} {Pfam: Tctex-1 family [PF03645.15, score=27.2]} {RNA1310_36440}
43. MligTC455_09694 4 0.09 Mlig455_009445

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_009445 {REF} {Length: 1055} {Pfam: Lectin C-type domain [PF00059.23, score=38.9]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=70.1, Expect=2e-14]} {RNA1310_33496.1} {RNA815_23317}
44. MligTC455_50070 34 0.7 Mlig455_053517

Neo: -

Age: Down-Up-Down

 0.969 - - - - 0.969 - Mlig455_053517 {REF} {Length: 2751} {RNA1509_46424} {RNA1310_8850} {RNA815_3382.1}
45. MligTC455_50169 16 0.34 Mlig455_058258, Mlig455_070793

Neo: Germline

Age: -

 0.969 - - - - 0.969 -

Mlig455_058258 {REF} {Length: 1025} {RNA1509_48033} {RNA1310_58376} {RNA815_51419}

Mlig455_070793 {REF} {Length: 1222} {RNA1509_48033} {RNA1310_58376} {RNA815_51419}
46. MligTC455_14596 9 0.19 Mlig455_063884

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_063884 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_138760}
47. MligTC455_08853 22 0.45 Mlig455_068998

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_068998 {REF} {Length: 1981} {Pfam: Glycine rich protein [PF12810.9, score=35.1]} {RNA1310_75162} {RNA815_38988}
48. MligTC455_01792 9 0.19 Mlig455_012711

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_012711 {REF} {Length: 590} {NoTransDecoderORF}
49. MligTC455_22687 13 0.28 Mlig455_000568

Neo: -

Age: -

 GRIK3 0.966 - - - - 0.966 - Mlig455_000568 {REF} {Length: 3271} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=78.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=50.7]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=127, Expect=1e-29]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=123, Expect=3e-28]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=121, Expect=1e-27]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=120, Expect=2e-27]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=120, Expect=1e-27]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=119, Expect=3e-27]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=115, Expect=1e-25]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=122, Expect=2e-28]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=105, Expect=5e-23]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [Score=120, Expect=8e-28]} {RNA1310_20394.2} {RNA815_45848}
50. MligTC455_11146 70 1.46 Mlig455_068743

Neo: -

Age: Down-Up-Down

 C11orf65 0.964 - - - - 0.964 - Mlig455_068743 {REF} {Length: 1750} {Human: ENSG00000166323, C11orf65, chromosome 11 open reading frame 65, [RH, Score=226, Expect=4e-72]} {Mouse: ENSMUSG00000005131, 4930550C14Rik, RIKEN cDNA 4930550C14 gene, [RH, Score=214, Expect=2e-67]} {Smed: dd_Smed_v6_13591_0_1, dd_Smed_v6_13591_0_1, [RH, Score=237, Expect=9e-77]} {RNA1310_22540.1} {RNA815_13464}
51. MligTC455_14717 4 0.09 Mlig455_052787

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_052787 {REF} {Length: 355} {RNA1509_43735} {RNA1310_16914} {RNA815_17245}
52. MligTC455_46108 13 0.28 Mlig455_003503

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_003503 {REF} {Length: 2542} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.8]} {Celegans: WBGene00019445, frpr-12, FMRFamide Peptide Receptor family, [Score=48.1, Expect=8e-06]} {Smed: dd_Smed_v6_21110_0_1, dd_Smed_v6_21110_0_1, [Score=202, Expect=8e-61]} {RNA1310_42800} {RNA815_34794}
53. MligTC455_54060 17 0.36 Mlig455_052757

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_052757 {REF} {Length: 4715} {RNA1310_25388} {RNA815_43889}
54. MligTC455_03172 25 0.52 Mlig455_016132, Mlig455_036881

Neo: -

Age: Down-Up-Down

 0.96 - - - - 0.960 -

Mlig455_016132 {REF} {Length: 1316} {NoTransDecoderORF} {RNA1509_8439} {RNA1310_1034.2} {RNA815_62940}

Mlig455_036881 {REF} {Length: 2951} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1}
55. MligTC455_05589 5 0.1 Mlig455_005329

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_005329 {REF} {Length: 983} {RNA1509_20735} {RNA1310_8770} {RNA815_4829.1}
56. MligTC455_09133 164 3.42 Mlig455_005553

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_005553 {REF} {Length: 504} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
57. MligTC455_14765 26 0.54 Mlig455_042350

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_042350 {REF} {Length: 1326} {RNA1509_8414} {RNA1310_791.2} {RNA815_23426}
58. MligTC455_18007 56 1.16 Mlig455_021386, Mlig455_067267

Neo: -

Age: -

 0.958 - - - - 0.958 -

Mlig455_021386 {REF} {Length: 857} {NoTransDecoderORF} {RNA815_57418}

Mlig455_067267 {REF} {Length: 775} {NoTransDecoderORF} {RNA815_57418}
59. MligTC455_18304 11 0.24 Mlig455_029427

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_029427 {REF} {Length: 2045} {RNA1509_3813, RNA1509_41367} {RNA1310_145020, RNA1509_41367} {RNA1509_41367, RNA815_46039}
60. MligTC455_07110 5 0.1 Mlig455_060020

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_060020 {REF} {Length: 152} {NoTransDecoderORF} {RNA1509_51294} {RNA1310_405.1} {RNA815_3002}
61. MligTC455_07560 30 0.63 Mlig455_034758

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_034758 {REF} {Length: 1794} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40708} {RNA1310_51729} {RNA815_64552}
62. MligTC455_11573 19 0.4 Mlig455_015520

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_015520 {REF} {Length: 1023} {Pfam: Interferon-induced transmembrane protein [PF04505.14, score=29.6]} {Smed: dd_Smed_v6_18586_0_1, dd_Smed_v6_18586_0_1, [RH, Score=77.0, Expect=2e-18]} {RNA1509_50632} {RNA1310_56265} {RNA815_33696}
63. MligTC455_18722 24 0.5 Mlig455_018294

Neo: Int S/G2/M

Age: Up-Down-Down

 PLK2 0.957 - - - - 0.957 - Mlig455_018294 {REF} {Length: 3188} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=53.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=23.3]} {Human: ENSG00000145632, PLK2, polo like kinase 2, [Score=75.1, Expect=3e-15]; ENSG00000166851, PLK1, polo like kinase 1, [Score=73.2, Expect=1e-14]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [Score=77.0, Expect=4e-16]; ENSMUSG00000021701, Plk2, polo like kinase 2, [Score=74.7, Expect=3e-15]} {Dmel: FBgn0003124, polo, [Score=65.1, Expect=3e-12]} {Celegans: WBGene00004042, plk-1, Serine/threonine-protein kinase plk-1, [Score=62.8, Expect=2e-11]} {Smed: dd_Smed_v6_3838_0_1, dd_Smed_v6_3838_0_1, [Score=60.5, Expect=6e-11]} {RNA1509_35335} {RNA1310_29286} {RNA815_15815}
64. MligTC455_20105 19 0.39 Mlig455_031770

Neo: -

Age: -

 GEM 0.957 - - - - 0.957 - Mlig455_031770 {REF} {Length: 3348} {Pfam: Ras family [PF00071.24, score=56.4]} {Human: ENSG00000164949, GEM, GTP binding protein overexpressed in skeletal muscle, [Score=84.7, Expect=4e-18]; ENSG00000166592, RRAD, RRAD, Ras related glycolysis inhibitor and calcium channel regulator, [Score=82.0, Expect=5e-17]} {Mouse: ENSMUSG00000028214, Gem, GTP binding protein (gene overexpressed in skeletal muscle), [Score=84.3, Expect=5e-18]; ENSMUSG00000000359, Rem1, rad and gem related GTP binding protein 1, [Score=81.3, Expect=6e-17]} {Dmel: FBgn0085419, Rgk2, Rad, Gem/Kir family member 2, [Score=107, Expect=3e-25]} {Celegans: WBGene00021027, W04C9.5, [RH, Score=67.4, Expect=3e-12]} {Smed: dd_Smed_v6_11010_0_1, dd_Smed_v6_11010_0_1, [Score=147, Expect=9e-41]} {RNA1310_124922}
65. MligTC455_16350 31 0.64 Mlig455_070243

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_070243 {REF} {Length: 926} {NoTransDecoderORF} {RNA1509_49394} {RNA1310_44365.1} {RNA815_38086}
66. MligTC455_32908 97 2.02 Mlig455_064081

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_064081 {REF} {Length: 578} {NoTransDecoderORF} {RNA1310_91407} {RNA815_49815}
67. MligTC455_45776 15 0.31 Mlig455_038488

Neo: -

Age: Up-Down-Up

 RTL1 0.956 - - - - 0.956 - Mlig455_038488 {REF} {Length: 4548} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.9]; Integrase zinc binding domain [PF17921.3, score=67.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.3]; Integrase core domain [PF00665.28, score=46.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.4]; Zinc knuckle [PF00098.25, score=22.7]; Aspartyl protease [PF09668.12, score=21.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=76.3, Expect=4e-13]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=69.3, Expect=4e-11]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=69.3, Expect=4e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=289, Expect=3e-81]} {RNA1310_22154.1} {RNA815_10995}
68. MligTC455_26434 22 0.46 Mlig455_001523

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_001523 {REF} {Length: 2783} {NoTransDecoderORF} {RNA1509_35931} {RNA1310_27850} {RNA815_27201}
69. MligTC455_53218 13 0.28 Mlig455_015864, Mlig455_016085

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_015864 {REF} {Length: 2430} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=119.0]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=49.3, Expect=5e-06]} {RNA1509_37881} {RNA1310_24188} {RNA815_39331}

Mlig455_016085 {REF} {Length: 2183} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=119.9]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=49.3, Expect=4e-06]} {RNA1509_37881} {RNA1310_24188} {RNA815_39331}
70. MligTC455_07351 6 0.13 Mlig455_052523, Mlig455_069102

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_052523 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1310_60355}

Mlig455_069102 {REF} {Length: 1122} {NoTransDecoderORF} {RNA1310_60355}
71. MligTC455_13085 18 0.38 Mlig455_005492, Mlig455_005515

Neo: -

Age: -

Region-enriched R5: 2.780/0.01232

 0.953 - - - - 0.953 -

Mlig455_005492 {REF} {Length: 1217} {RNA1509_41201} {RNA1310_4034.2} {RNA815_51130}

Mlig455_005515 {REF} {Length: 1438} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=27.2]} {RNA1509_41201} {RNA1310_4034.2} {RNA815_13005.2}
72. MligTC455_38232 121 2.53 Mlig455_046823

Neo: -

Age: Down-Up-Down

 RANGRF 0.953 - - - - 0.953 - Mlig455_046823 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: Ran-interacting Mog1 protein [PF04603.14, score=107.8]} {Human: ENSG00000108961, RANGRF, RAN guanine nucleotide release factor, [RH, Score=95.9, Expect=1e-24]} {Mouse: ENSMUSG00000032892, Rangrf, RAN guanine nucleotide release factor, [RH, Score=95.5, Expect=2e-24]} {Smed: dd_Smed_v6_9849_0_1, dd_Smed_v6_9849_0_1, [RH, Score=77.0, Expect=5e-18]} {RNA1509_38811} {RNA1310_1438.1} {RNA815_12405}
73. MligTC455_53892 31 0.64 Mlig455_064056

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_064056 {REF} {Length: 546} {TRANSSPLICED} {RNA1509_48446} {RNA1310_90226}
74. MligTC455_57674 14 0.3 Mlig455_065260

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_065260 {REF} {Length: 346} {NoTransDecoderORF} {RNA1509_41294} {RNA1310_105871}
75. MligTC455_18549 35 0.72 Mlig455_003836

Neo: -

Age: Up-Down-Down

 0.952 - - - - 0.952 - Mlig455_003836 {REF} {Length: 1990} {RNA1509_32165} {RNA1310_13450} {RNA815_5462.1}
76. MligTC455_31732 8 0.17 Mlig455_045943

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_045943 {REF} {Length: 2817} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=35.1]; Zinc knuckle [PF00098.25, score=31.7]; Aspartyl protease [PF13650.8, score=28.6]; Zinc knuckle [PF13696.8, score=19.0]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.0, Expect=8e-12]} {RNA1509_36828} {RNA1310_12208} {RNA815_2678}
77. MligTC455_40518 188 3.92 Mlig455_030879

Neo: -

Age: Down-Up-Down

 0.952 - - - - 0.952 - Mlig455_030879 {REF} {Length: 3875} {Pfam: L-fucokinase [PF07959.14, score=21.2]} {RNA1509_24525} {RNA1310_7771, RNA1509_24525} {RNA1509_24525, RNA815_2955}
78. MligTC455_21429 18 0.37 Mlig455_049174

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_049174 {REF} {Length: 2613} {NoTransDecoderORF} {RNA1310_50381} {RNA815_39191}
79. MligTC455_24485 17 0.36 Mlig455_012229, Mlig455_035973, Mlig455_047635

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_012229 {REF} {Length: 2139} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=138, Expect=1e-33]} {RNA1509_37183} {RNA1310_7048.1} {RNA815_45630}

Mlig455_035973 {REF} {Length: 3115} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=140, Expect=4e-34]} {RNA1509_37183} {RNA1310_7048.1} {RNA815_45630}

Mlig455_047635 {REF} {Length: 3891} {TRANSSPLICED} {RNA1509_37183} {RNA1310_7048.1} {RNA815_1497.1}
80. MligTC455_28838 84 1.75 Mlig455_007557

Neo: -

Age: -

Region-enriched R4: 3.260/0.01289
Region-enriched R5: 2.662/0.02640

 0.951 - - - - 0.951 - Mlig455_007557 {REF} {Length: 745} {RNA1310_66594.1} {RNA815_40011}
81. MligTC455_42097 210 4.37 Mlig455_064897, Mlig455_064901

Neo: -

Age: -

Region-enriched R2: 3.777/0.00394

 KCTD16 0.951 - - - - 0.951 -

Mlig455_064897 {REF} {Length: 1965} {Pfam: BTB/POZ domain [PF02214.24, score=51.4]} {Human: ENSG00000183775, KCTD16, potassium channel tetramerization domain containing 16, [RH, Score=176, Expect=6e-51]} {Mouse: ENSMUSG00000051401, Kctd16, potassium channel tetramerisation domain containing 16, [RH, Score=177, Expect=1e-51]; ENSMUSG00000041633, Kctd12b, potassium channel tetramerisation domain containing 12b, [RH, Score=169, Expect=1e-49]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [RH, Score=258, Expect=1e-85]} {Celegans: WBGene00014848, VM106R.1, [RH, Score=184, Expect=1e-55]} {Smed: dd_Smed_v6_12440_0_1, dd_Smed_v6_12440_0_1, [RH, Score=248, Expect=9e-82]} {RNA1310_28657.2} {RNA815_14650}

Mlig455_064901 {REF} {Length: 1674} {Pfam: BTB/POZ domain [PF02214.24, score=51.3]} {Human: ENSG00000183775, KCTD16, potassium channel tetramerization domain containing 16, [RH, Score=176, Expect=1e-50]} {Mouse: ENSMUSG00000051401, Kctd16, potassium channel tetramerisation domain containing 16, [RH, Score=177, Expect=2e-51]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [RH, Score=258, Expect=3e-85]} {Celegans: WBGene00014848, VM106R.1, [RH, Score=183, Expect=3e-55]} {Smed: dd_Smed_v6_12440_0_1, dd_Smed_v6_12440_0_1, [RH, Score=247, Expect=2e-81]} {RNA1310_28657.2} {RNA815_14650}
82. MligTC455_56865 9 0.18 Mlig455_024553

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_024553 {REF} {Length: 339} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_75329} {RNA815_52758}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA