M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_05920

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_05920 6 0.13 Mlig455_050975

Neo: -

Age: -

 Mlig455_050975 {REF} {Length: 592} {NoTransDecoderORF} {RNA1509_41075} {RNA1310_75397} {RNA815_45642}

Cumulative graph for MligTC455_05920

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_05920

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_05920 6 0.13 Mlig455_050975

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_050975 {REF} {Length: 592} {NoTransDecoderORF} {RNA1509_41075} {RNA1310_75397} {RNA815_45642}
2. MligTC455_55397 4 0.09 Mlig455_051517

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_051517 {REF} {Length: 200} {NoTransDecoderORF}
3. MligTC455_00053 10 0.2 Mlig455_045698

Neo: -

Age: -

 0.989 - - - - 0.989 - Mlig455_045698 {REF} {Length: 347} {NoTransDecoderORF}
4. MligTC455_30065 46 0.96 Mlig455_053052

Neo: -

Age: -

 ANK2 0.981 - - - - 0.981 - Mlig455_053052 {REF} {Length: 5863} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=123.9]; Ankyrin repeats (many copies) [PF13637.8, score=83.7]; Ankyrin repeat [PF00023.32, score=80.8]; Ankyrin repeat [PF13606.8, score=66.9]; Ankyrin repeats (many copies) [PF13857.8, score=59.1]; Mab-21 protein [PF03281.16, score=23.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=135, Expect=4e-31]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=126, Expect=9e-29]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=122, Expect=3e-27]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=120, Expect=9e-27]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=128, Expect=2e-29]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=118, Expect=2e-26]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=136, Expect=4e-32]} {RNA1509_49840} {RNA1310_3556} {RNA815_2400.1}
5. MligTC455_30646 5 0.11 Mlig455_024994

Neo: -

Age: -

 SACS 0.98 - - - - 0.980 - Mlig455_024994 {REF} {Length: 7657} {Human: ENSG00000151835, SACS, sacsin molecular chaperone, [Score=218, Expect=4e-56]} {Mouse: ENSMUSG00000048279, Sacs, sacsin, [Score=220, Expect=4e-57]} {RNA1509_28306} {RNA1310_2346.1} {RNA815_63.1}
6. MligTC455_13416 16 0.33 Mlig455_046199

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_046199 {REF} {Length: 168} {NoTransDecoderORF}
7. MligTC455_01819 14 0.3 Mlig455_059785

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_059785 {REF} {Length: 1348} {RNA1310_113229}
8. MligTC455_26358 428 8.93 Mlig455_012675

Neo: -

Age: logFC(26M/2M)=-0.338

Region-enriched R2: 1.608/0.04280

 NOTCH2 0.974 - - - - 0.974 - Mlig455_012675 {REF} {Length: 4700} {Pfam: EGF-like domain [PF00008.29, score=144.8]; Ankyrin repeats (3 copies) [PF12796.9, score=86.3]; Human growth factor-like EGF [PF12661.9, score=80.1]; Ankyrin repeats (many copies) [PF13857.8, score=70.9]; Ankyrin repeat [PF00023.32, score=65.4]; Ankyrin repeats (many copies) [PF13637.8, score=61.9]; Ankyrin repeat [PF13606.8, score=58.6]; LNR domain [PF00066.19, score=52.0]; EGF-like domain [PF07974.15, score=46.9]; Calcium-binding EGF domain [PF07645.17, score=31.9]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=311, Expect=2e-87]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=329, Expect=2e-93]} {Dmel: FBgn0004647, N, Notch, [Score=325, Expect=6e-92]} {Celegans: WBGene00003001, lin-12, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=214, Expect=1e-56]} {RNA1509_20447, RNA1509_55795} {RNA1310_1718.1, RNA1509_20447, RNA1509_55795} {RNA1509_20447, RNA1509_55795, RNA815_12429}
9. MligTC455_30845 20 0.41 Mlig455_011948

Neo: -

Age: Up-Down-Up

 CRB1 0.974 - - - - 0.974 - Mlig455_011948 {REF} {Length: 2732} {Human: ENSG00000134376, CRB1, crumbs 1, cell polarity complex component, [Score=62.0, Expect=1e-09]} {Mouse: ENSMUSG00000021614, Vcan, versican, [Score=57.0, Expect=3e-08]; ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=54.7, Expect=1e-07]} {Dmel: FBgn0259685, crb, crumbs, [Score=57.0, Expect=2e-08]} {Celegans: WBGene00003001, lin-12, [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_11876_0_1, dd_Smed_v6_11876_0_1, [Score=52.0, Expect=5e-07]} {RNA1509_37192} {RNA1310_27038} {RNA815_4589.1}
10. MligTC455_56572 7 0.15 Mlig455_055432

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_055432 {REF} {Length: 280} {NoTransDecoderORF} {RNA1509_59493} {RNA1310_14118} {RNA815_4477.2}
11. MligTC455_14021 15 0.31 Mlig455_000433, Mlig455_024852

Neo: -

Age: -

 0.971 - - - - 0.971 -

Mlig455_000433 {REF} {Length: 1826} {RNA1310_112915}

Mlig455_024852 {REF} {Length: 202} {NoTransDecoderORF} {RNA1310_139314}
12. MligTC455_20241 106 2.21 Mlig455_064205

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.589

 0.971 - - - - 0.971 - Mlig455_064205 {REF} {Length: 1849} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=62.8, Expect=2e-11]} {RNA1509_7841} {RNA1310_18810} {RNA815_3607}
13. MligTC455_54747 11 0.22 Mlig455_034717

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_034717 {REF} {Length: 616} {Pfam: Inter-alpha-trypsin inhibitor heavy chain C-terminus [PF06668.14, score=20.8]}
14. MligTC455_55842 8 0.17 Mlig455_011618

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_011618 {REF} {Length: 208} {NoTransDecoderORF}
15. MligTC455_14026 38 0.8 Mlig455_023627

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_023627 {REF} {Length: 1475} {Pfam: Flagellar-associated PapD-like [PF14874.8, score=30.1]; CS domain [PF04969.18, score=27.0]} {RNA1509_6357} {RNA1310_134529} {RNA815_1252}
16. MligTC455_26366 75 1.56 Mlig455_013893

Neo: -

Age: -

 NSUN7 0.968 - - - - 0.968 - Mlig455_013893 {REF} {Length: 1904} {Human: ENSG00000179299, NSUN7, NOP2/Sun RNA methyltransferase family member 7, [Score=167, Expect=4e-45]} {Mouse: ENSMUSG00000029206, Nsun7, NOL1/NOP2/Sun domain family, member 7, [Score=164, Expect=3e-44]} {Dmel: FBgn0266099, CG44836, [Score=72.8, Expect=2e-13]} {Celegans: WBGene00013151, nsun-5, Nop2 (NOP2)/SUN domain family member, [Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_30093_0_1, dd_Smed_v6_30093_0_1, [Score=203, Expect=3e-60]} {RNA1310_17601} {RNA815_32144}
17. MligTC455_45357 32 0.66 Mlig455_062549

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_062549 {REF} {Length: 2469} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=72.8]} {RNA1310_136483}
18. MligTC455_38926 75 1.56 Mlig455_036654

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_036654 {REF} {Length: 654} {TRANSSPLICED} {RNA1509_25556} {RNA1310_11387.2} {RNA815_48752}
19. MligTC455_14764 12 0.25 Mlig455_021050

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_021050 {REF} {Length: 2226} {RNA1310_91563}
20. MligTC455_36885 177 3.69 Mlig455_043100

Neo: -

Age: Up-Up-Down

 CASP10 0.965 - - - - 0.965 - Mlig455_043100 {REF} {Length: 4546} {Pfam: Caspase domain [PF00656.24, score=96.4]} {Human: ENSG00000003400, CASP10, caspase 10, [Score=65.1, Expect=3e-10]} {Mouse: ENSMUSG00000025888, Casp1, caspase 1, [Score=55.1, Expect=3e-07]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=58.2, Expect=1e-08]} {RNA1509_22461} {RNA1310_3207.1, RNA1509_22461} {RNA1509_22461, RNA815_1110}
21. MligTC455_40513 96 2 Mlig455_054279

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.607

 0.965 - - - - 0.965 - Mlig455_054279 {REF} {Length: 1519} {Smed: dd_Smed_v6_30766_0_1, dd_Smed_v6_30766_0_1, [Score=70.9, Expect=1e-14]} {RNA1509_43127} {RNA1310_25840} {RNA815_22201}
22. MligTC455_17535 22 0.45 Mlig455_004584

Neo: -

Age: Down-Down-Up

 0.963 - - - - 0.963 - Mlig455_004584 {REF} {Length: 1610} {Pfam: CD20-like family [PF04103.17, score=25.6]} {RNA1509_45188} {RNA1310_19605} {RNA815_13393}
23. MligTC455_11279 35 0.73 Mlig455_013960

Neo: -

Age: -

 ANK1 0.962 - - - - 0.962 - Mlig455_013960 {REF} {Length: 3851} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=175.9]; Ankyrin repeats (many copies) [PF13637.8, score=158.1]; Ankyrin repeats (many copies) [PF13857.8, score=137.2]; Ankyrin repeat [PF00023.32, score=134.2]; Ankyrin repeat [PF13606.8, score=115.0]; Mab-21 protein [PF03281.16, score=28.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=171, Expect=9e-43]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=168, Expect=7e-42]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=173, Expect=1e-43]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=192, Expect=1e-49]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=162, Expect=2e-40]} {Smed: dd_Smed_v6_2072_0_2, dd_Smed_v6_2072_0_2, [Score=150, Expect=9e-37]}
24. MligTC455_30510 11 0.22 Mlig455_055207

Neo: -

Age: -

 PPFIBP1 0.962 - - - - 0.962 - Mlig455_055207 {REF} {Length: 3280} {Pfam: SAM domain (Sterile alpha motif) [PF07647.19, score=70.1]; SAM domain (Sterile alpha motif) [PF00536.32, score=49.7]; TolA binding protein trimerisation [PF16331.7, score=19.1]} {Human: ENSG00000110841, PPFIBP1, PPFIA binding protein 1, [RH, Score=198, Expect=8e-54]; ENSG00000166387, PPFIBP2, PPFIA binding protein 2, [RH, Score=192, Expect=4e-52]} {Mouse: ENSMUSG00000016487, Ppfibp1, PTPRF interacting protein, binding protein 1 (liprin beta 1), [RH, Score=197, Expect=5e-53]; ENSMUSG00000036528, Ppfibp2, PTPRF interacting protein, binding protein 2 (liprin beta 2), [RH, Score=194, Expect=5e-52]} {Dmel: FBgn0036376, Liprin-beta, [RH, Score=179, Expect=1e-47]} {Celegans: WBGene00011904, hlb-1, Liprin-beta, [RH, Score=155, Expect=4e-39]} {Smed: dd_Smed_v6_7610_0_2, dd_Smed_v6_7610_0_2, [RH, Score=204, Expect=1e-56]} {RNA1509_21478} {RNA1310_4697} {RNA815_6558}
25. MligTC455_00349 7 0.15 Mlig455_069175

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_069175 {REF} {Length: 639} {RNA1310_21320}
26. MligTC455_47819 9 0.2 Mlig455_033339, Mlig455_059759

Neo: -

Age: -

 0.961 - - - - 0.961 -

Mlig455_033339 {REF} {Length: 1057} {RNA1509_48033} {RNA1310_58376} {RNA815_51419}

Mlig455_059759 {REF} {Length: 109} {NoTransDecoderORF} {RNA1310_58376} {RNA815_51419}
27. MligTC455_30826 98 2.04 Mlig455_047664

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_047664 {REF} {Length: 879} {NoTransDecoderORF} {RNA1310_39208} {RNA815_16462}
28. MligTC455_33916 47 0.98 Mlig455_036905

Neo: -

Age: Down-Up-Up

 HIST2H2AB 0.957 - - - - 0.957 - Mlig455_036905 {REF} {Length: 1404} {TRANSSPLICED} {Pfam: C-terminus of histone H2A [PF16211.7, score=72.0]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=57.6]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=25.0]} {Human: ENSG00000184270, HIST2H2AB, histone cluster 2 H2A family member b, [RH, Score=225, Expect=4e-77]; ENSG00000164508, HIST1H2AA, histone cluster 1 H2A family member a, [RH, Score=224, Expect=1e-76]; ENSG00000196747, HIST1H2AI, histone cluster 1 H2A family member i, [RH, Score=224, Expect=5e-77]; ENSG00000276903, HIST1H2AL, histone cluster 1 H2A family member l, [RH, Score=224, Expect=5e-77]; ENSG00000196866, HIST1H2AD, histone cluster 1 H2A family member d, [RH, Score=224, Expect=1e-76]; ENSG00000278677, HIST1H2AM, histone cluster 1 H2A family member m, [RH, Score=224, Expect=5e-77]; ENSG00000276368, HIST1H2AJ, histone cluster 1 H2A family member j, [RH, Score=224, Expect=1e-76]; ENSG00000196787, HIST1H2AG, histone cluster 1 H2A family member g, [RH, Score=224, Expect=5e-77]; ENSG00000274997, HIST1H2AH, histone cluster 1 H2A family member h, [RH, Score=224, Expect=5e-77]; ENSG00000275221, HIST1H2AK, histone cluster 1 H2A family member k, [RH, Score=224, Expect=5e-77]; ENSG00000180573, HIST1H2AC, histone cluster 1 H2A family member c, [RH, Score=223, Expect=3e-76]; ENSG00000188486, H2AFX, H2A histone family member X, [RH, Score=223, Expect=3e-76]; ENSG00000272196, HIST2H2AA4, histone cluster 2 H2A family member a4, [RH, Score=223, Expect=3e-76]; ENSG00000278463, HIST1H2AB, histone cluster 1 H2A family member b, [RH, Score=223, Expect=2e-76]; ENSG00000277075, HIST1H2AE, histone cluster 1 H2A family member e, [RH, Score=223, Expect=2e-76]; ENSG00000203812, HIST2H2AA3, histone cluster 2 H2A family member a3, [RH, Score=223, Expect=3e-76]; ENSG00000282988, AL031777.3, novel protein, [RH, Score=223, Expect=5e-76]; ENSG00000181218, HIST3H2A, histone cluster 3 H2A, [RH, Score=222, Expect=7e-76]; ENSG00000184260, HIST2H2AC, histone cluster 2 H2A family member c, [RH, Score=222, Expect=4e-76]; ENSG00000284841, HIST3H2A, histone cluster 3 H2A, [RH, Score=222, Expect=7e-76]; ENSG00000246705, H2AFJ, H2A histone family member J, [RH, Score=221, Expect=9e-76]} {Mouse: ENSMUSG00000063689, Hist2h2ab, histone cluster 2, H2ab, [RH, Score=224, Expect=4e-77]; ENSMUSG00000063021, Hist1h2ak, histone cluster 1, H2ak, [RH, Score=224, Expect=7e-77]; ENSMUSG00000069309, Hist1h2an, histone cluster 1, H2an, [RH, Score=223, Expect=1e-76]; ENSMUSG00000071478, Hist1h2ad, histone cluster 1, H2ad, [RH, Score=223, Expect=1e-76]; ENSMUSG00000094777, Hist1h2ap, histone cluster 1, H2ap, [RH, Score=223, Expect=1e-76]; ENSMUSG00000064220, Hist2h2aa1, histone cluster 2, H2aa1, [RH, Score=223, Expect=2e-76]; ENSMUSG00000094248, Hist1h2ao, histone cluster 1, H2ao, [RH, Score=223, Expect=1e-76]; ENSMUSG00000069270, Hist1h2ac, histone cluster 1, H2ac, [RH, Score=223, Expect=1e-76]; ENSMUSG00000063954, Hist2h2aa2, histone cluster 2, H2aa2, [RH, Score=223, Expect=2e-76]; ENSMUSG00000069302, Hist1h2ah, histone cluster 1, H2ah, [RH, Score=223, Expect=1e-76]; ENSMUSG00000061615, Hist1h2ab, histone cluster 1, H2ab, [RH, Score=223, Expect=1e-76]; ENSMUSG00000071516, Hist1h2ai, histone cluster 1, H2ai, [RH, Score=223, Expect=1e-76]; ENSMUSG00000069301, Hist1h2ag, histone cluster 1, H2ag, [RH, Score=223, Expect=1e-76]; ENSMUSG00000069272, Hist1h2ae, histone cluster 1, H2ae, [RH, Score=223, Expect=1e-76]; ENSMUSG00000049932, H2afx, H2A histone family, member X, [RH, Score=222, Expect=5e-76]; ENSMUSG00000068855, Hist2h2ac, histone cluster 2, H2ac, [RH, Score=222, Expect=3e-76]; ENSMUSG00000078851, Hist3h2a, histone cluster 3, H2a, [RH, Score=222, Expect=5e-76]; ENSMUSG00000061991, Hist1h2af, histone cluster 1, H2af, [RH, Score=221, Expect=5e-76]; ENSMUSG00000060032, H2afj, H2A histone family, member J, [RH, Score=221, Expect=1e-75]} {Dmel: FBgn0051618, His2A:CG31618, [RH, Score=206, Expect=3e-70]} {Celegans: WBGene00001931, his-57, Histone H2A, [RH, Score=200, Expect=1e-67]} {Smed: dd_Smed_v6_7383_0_1, dd_Smed_v6_7383_0_1, [RH, Score=225, Expect=1e-77]} {RNA1509_15140} {RNA1310_15531.1} {RNA815_17361.2}
29. MligTC455_42902 28 0.59 Mlig455_017220

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_017220 {REF} {Length: 656} {NoTransDecoderORF} {RNA1509_43125} {RNA1310_24647} {RNA815_24974}
30. MligTC455_06713 7 0.15 Mlig455_053256

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_053256 {REF} {Length: 357} {NoTransDecoderORF} {RNA1310_145656}
31. MligTC455_18550 27 0.57 Mlig455_003630

Neo: Germline

Age: logFC(26M/2M)=-0.849

 0.956 - - - - 0.956 - Mlig455_003630 {REF} {Length: 2511} {RNA1509_32165} {RNA1310_13450} {RNA815_5462.1}
32. MligTC455_20828 43 0.91 Mlig455_039990

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_039990 {REF} {Length: 3053} {NoTransDecoderORF} {RNA1310_18595} {RNA815_11725}
33. MligTC455_22091 16 0.33 Mlig455_007206

Neo: -

Age: -

 PRR9 0.956 - - - - 0.956 - Mlig455_007206 {REF} {Length: 2075} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.8, Expect=1e-07]} {RNA1310_45787}
34. MligTC455_48633 399 8.32 Mlig455_054497

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.353

 0.956 - - - - 0.956 - Mlig455_054497 {REF} {Length: 2714} {Pfam: TIR domain [PF13676.8, score=87.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=27.1]; SAM domain (Sterile alpha motif) [PF00536.32, score=19.5]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [Score=65.9, Expect=7e-11]} {RNA1509_36274} {RNA1310_5526} {RNA815_2549.1}
35. MligTC455_52462 166 3.45 Mlig455_005943

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=4.076

Regeneration-upregulated R2: 5.759

Regeneration-enriched R2: 5.759

 AGRN 0.956 - - - - 0.956 - Mlig455_005943 {REF} {Length: 1577} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=130.4]; Kazal-type serine protease inhibitor domain [PF07648.17, score=91.6]} {Human: ENSG00000188157, AGRN, agrin, [Score=55.8, Expect=8e-08]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=56.2, Expect=4e-08]} {Dmel: FBgn0052354, CG32354, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=51.6, Expect=5e-07]} {RNA1509_43736} {RNA1310_19594} {RNA815_11515}
36. MligTC455_30713 277 5.78 Mlig455_044000, Mlig455_050688

Neo: -

Age: -

 TTLL9 0.955 - - - - 0.955 -

Mlig455_044000 {REF} {Length: 2900} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=293.3]; YheC/D like ATP-grasp [PF14398.8, score=28.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=19.3]} {Human: ENSG00000131044, TTLL9, tubulin tyrosine ligase like 9, [RH, Score=500, Expect=9e-177]} {Mouse: ENSMUSG00000074673, Ttll9, tubulin tyrosine ligase-like family, member 9, [RH, Score=542, Expect=0.0]} {Dmel: FBgn0052238, CG32238, [Score=314, Expect=1e-102]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [RH, Score=383, Expect=9e-131]} {Smed: dd_Smed_v6_13605_0_1, dd_Smed_v6_13605_0_1, [RH, Score=529, Expect=0.0]} {RNA1509_23575, RNA1509_38415, RNA1509_39587} {RNA1310_6106, RNA1509_23575, RNA1509_38415, RNA1509_39587} {RNA1509_23575, RNA1509_38415, RNA1509_39587, RNA815_8243}

Mlig455_050688 {REF} {Length: 3812} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=291.5]; YheC/D like ATP-grasp [PF14398.8, score=25.9]} {Human: ENSG00000131044, TTLL9, tubulin tyrosine ligase like 9, [RH, Score=509, Expect=3e-175]} {Mouse: ENSMUSG00000074673, Ttll9, tubulin tyrosine ligase-like family, member 9, [RH, Score=553, Expect=0.0]} {Dmel: FBgn0052238, CG32238, [Score=317, Expect=2e-99]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [RH, Score=387, Expect=8e-128]} {Smed: dd_Smed_v6_13605_0_1, dd_Smed_v6_13605_0_1, [RH, Score=539, Expect=0.0]} {RNA1509_38415} {RNA1310_6106} {RNA815_8243}
37. MligTC455_10476 3 0.07 Mlig455_031071

Neo: -

Age: logFC(26M/2M)=-1.165

 MAP1A 0.954 - - - - 0.954 - Mlig455_031071 {REF} {Length: 2600} {Pfam: Family of unknown function (DUF5892) [PF19243.1, score=77.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=28.1]; Prokaryotic RING finger family 4 [PF14447.8, score=21.8]} {Human: ENSG00000166963, MAP1A, microtubule associated protein 1A, [Score=85.5, Expect=1e-16]} {RNA1509_14834} {RNA1310_38934} {RNA815_20717}
38. MligTC455_34257 6 0.12 Mlig455_039097

Neo: -

Age: Up-Down-Down

 UNC80 0.954 - - - - 0.954 - Mlig455_039097 {REF} {Length: 10668} {TRANSSPLICED} {Pfam: Protein UNC80 [PF19424.1, score=726.5]; UNC80 N-terminal [PF15778.7, score=203.4]} {Human: ENSG00000144406, UNC80, unc-80 homolog, NALCN channel complex subunit, [Score=494, Expect=3e-140]} {Mouse: ENSMUSG00000055567, Unc80, unc-80, NALCN activator, [Score=499, Expect=5e-142]} {Dmel: FBgn0039536, unc80, uncoordinated 80, [Score=302, Expect=1e-81]} {Celegans: WBGene00006812, unc-80, [Score=329, Expect=6e-90]} {Smed: dd_Smed_v6_5118_0_1, dd_Smed_v6_5118_0_1, [Score=618, Expect=0.0]} {RNA1509_5680} {RNA1310_1690.1} {RNA815_194.1}
39. MligTC455_10164 25 0.53 Mlig455_047948

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_047948 {REF} {Length: 437} {NoTransDecoderORF} {RNA1509_42160} {RNA1310_38543} {RNA815_64948}
40. MligTC455_13417 13 0.26 Mlig455_009840, Mlig455_010346

Neo: -

Age: -

 0.952 - - - - 0.952 -

Mlig455_009840 {REF} {Length: 1027} {NoTransDecoderORF} {RNA1310_124106} {RNA815_30229.1}

Mlig455_010346 {REF} {Length: 658} {NoTransDecoderORF} {RNA1310_124106} {RNA815_30229.1}
41. MligTC455_30389 116 2.41 Mlig455_029602

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_029602 {REF} {Length: 2395} {RNA1509_16871} {RNA1310_10374.1} {RNA815_9291}
42. MligTC455_00291 4 0.08 Mlig455_041817

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_041817 {REF} {Length: 137} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_50573} {RNA1310_17892.1}
43. MligTC455_00431 10 0.21 Mlig455_062910

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_062910 {REF} {Length: 862} {RNA1509_15401} {RNA1310_104073} {RNA815_6960}
44. MligTC455_22613 61 1.28 Mlig455_027104

Neo: -

Age: -

 FYN 0.951 - - - - 0.951 - Mlig455_027104 {REF} {Length: 3199} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=253.8]; Protein kinase domain [PF00069.27, score=164.0]; SH3 domain [PF00018.30, score=35.8]; Variant SH3 domain [PF07653.19, score=34.4]; SH2 domain [PF00017.26, score=33.0]; Variant SH3 domain [PF14604.8, score=30.8]; Bacterial SH3 domain [PF08239.13, score=24.5]; Kinase-like [PF14531.8, score=18.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.3]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=280, Expect=6e-87]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=274, Expect=6e-85]; ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=272, Expect=2e-84]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=268, Expect=6e-83]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=280, Expect=5e-87]; ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=276, Expect=6e-86]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=269, Expect=2e-83]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=266, Expect=7e-82]} {Dmel: FBgn0262733, Src64B, Src oncogene at 64B, [Score=271, Expect=6e-84]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=278, Expect=2e-87]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=313, Expect=8e-101]} {RNA1509_37079} {RNA1310_14637} {RNA815_4860}
45. MligTC455_04382 17 0.35 Mlig455_001234, Mlig455_034595

Neo: -

Age: -

 PCDH9 0.95 - - - - 0.950 -

Mlig455_001234 {REF} {Length: 2910} {Pfam: Cadherin domain [PF00028.19, score=196.4]; Cadherin-like [PF16184.7, score=46.1]; Bacterial cadherin-like domain [PF17803.3, score=26.8]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=195, Expect=1e-50]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=192, Expect=3e-50]; ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=183, Expect=1e-46]} {Dmel: FBgn0024836, stan, starry night, [Score=189, Expect=2e-48]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=140, Expect=2e-33]} {Smed: dd_Smed_v6_12697_0_1, dd_Smed_v6_12697_0_1, [Score=205, Expect=7e-55]} {RNA1310_103678}

Mlig455_034595 {REF} {Length: 4374} {Pfam: Cadherin domain [PF00028.19, score=226.9]; Cadherin-like [PF16184.7, score=45.7]; Bacterial cadherin-like domain [PF17803.3, score=26.8]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=204, Expect=3e-53]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=201, Expect=5e-52]; ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=197, Expect=1e-50]} {Dmel: FBgn0024836, stan, starry night, [Score=202, Expect=3e-52]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=137, Expect=2e-32]} {Smed: dd_Smed_v6_12697_0_1, dd_Smed_v6_12697_0_1, [RH, Score=229, Expect=3e-62]} {RNA1310_103678}
46. MligTC455_14961 39 0.82 Mlig455_048867

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
47. MligTC455_22231 40 0.84 Mlig455_032140

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_032140 {REF} {Length: 3501} {NoTransDecoderORF} {RNA1509_38388} {RNA1310_14332} {RNA815_16291}
48. MligTC455_23346 389 8.1 Mlig455_018766

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.603

Regeneration-downregulated R6: -2.996

Regeneration-depleted R6: -2.996

 0.95 - - - - 0.950 - Mlig455_018766 {REF} {Length: 921} {RNA1509_14088} {RNA1310_35033} {RNA815_47972}
49. MligTC455_41223 75 1.57 Mlig455_064371, Mlig455_064398

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.711

 TNKS2 0.95 - - - - 0.950 -

Mlig455_064371 {REF} {Length: 1874} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=109.1]; ADP-Ribosyltransferase in polyvalent proteins [PF18760.3, score=22.4]} {Human: ENSG00000107854, TNKS2, tankyrase 2, [Score=69.3, Expect=8e-13]; ENSG00000173273, TNKS, tankyrase, [Score=66.6, Expect=7e-12]; ENSG00000285372, AC270292.3, tankyrase, [Score=66.6, Expect=7e-12]} {Mouse: ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [Score=68.9, Expect=9e-13]; ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=66.6, Expect=6e-12]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=69.3, Expect=5e-13]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [Score=66.2, Expect=1e-12]} {Smed: dd_Smed_v6_10338_0_1, dd_Smed_v6_10338_0_1, [Score=69.3, Expect=3e-13]} {RNA1509_52186} {RNA1310_24914.1} {RNA815_11069}

Mlig455_064398 {REF} {Length: 854} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=104.6]} {Human: ENSG00000107854, TNKS2, tankyrase 2, [Score=67.4, Expect=1e-12]; ENSG00000173273, TNKS, tankyrase, [Score=64.7, Expect=1e-11]; ENSG00000285372, AC270292.3, tankyrase, [Score=64.3, Expect=2e-11]} {Mouse: ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [Score=66.6, Expect=2e-12]; ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=64.3, Expect=1e-11]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=67.8, Expect=7e-13]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [Score=65.5, Expect=8e-13]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=65.9, Expect=1e-12]} {RNA1509_52186} {RNA1310_24914.1} {RNA815_11069}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA